Oncorhynchus masou masou (cherry salmon): 135505129
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Entry
135505129 CDS
T10723
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135505129
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
135505129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_11
TPR_12
TPR_1
TPR_8
TPR_14
TPR_19
RMD1-3
TPR_16
TPR_CcmH_CycH
TPR-S
TPR_10
Sel1
TPR_7
TPR_SusR
ANAPC3
Motif
Other DBs
NCBI-GeneID:
135505129
NCBI-ProteinID:
XP_064780309
LinkDB
All DBs
Position
18:complement(65041869..65044317)
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AA seq
485 aa
AA seq
DB search
MCWCNFTTIEMSSILTKLLQLECRFTWDLRQDDMDIDNLQTRLKDQIELGLGKEAGVART
FSNLAYIKYLKGYPEEAMDNLLKAEELTREYHGEDCEKHLIVPYGDLCWLHYHVGDYIKC
QSYLEKLEEMKEKFPTSSTSVLHPEVYGEKGWTFLKFSYKYYDKALECFKKALELEFEES
EWNAGYAIALYRTEKELSSVNDSPAIKQLRRAIEINPQDAVLMVLLGLKLSVYKIFGEAE
ELVEKALDMSPDCPHVTRYVGKFLRQQGHVDKSIALLNRALQRTSQSAIIHHQLALCYKR
KKISVCKSGRFHGKGAEIQQLLRQCIQHLEMATSLKPSFIYAMAELALLYGEDKDITKAE
ELFKKTFEKALAKNDSLQVVNLNYGQFQQYHNKCEPLAIKHYTEGLELQKDTANGKSCAQ
KLKMIAERRISQDPMDGEACGILGFVYRMQGNKEQAVQWYDKAVVHDCNDKYLSALCELR
LSLQQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtgctggtgcaactttacaactattgaaatgagctccattttaaccaaactacttcaa
ctggagtgccgcttcacctgggatttgaggcaagatgacatggatattgataatctgcag
accaggctcaaggaccagattgagttaggtctcgggaaagaggcaggggttgcacggaca
ttcagcaatctggcctacatcaaatatctgaagggttacccagaagaggcaatggataac
ttgttaaaggctgaggagctcacgagagagtaccatggtgaggactgtgagaaacatctc
attgtcccctatggagacctttgctggttacattaccatgtgggtgattacatcaagtgc
cagagttacttagagaaactggaggagatgaaagagaagtttccaactagttccacatct
gtcctccatcctgaggtctatggtgagaagggttggaccttcctcaagttctcctataaa
tactatgacaaagcactagaatgcttcaagaaagctctggagctggagtttgaggagagt
gagtggaatgcaggttacgccattgcattgtatcgtacagaaaaagagctctcaagtgtt
aatgactcaccagctattaaacaactgagacgtgccatagagattaacccacaagacgca
gtcctcatggtccttctgggtctgaaactgtctgtctataaaatatttggggaggcagag
gagttggtggagaaagctctggatatgtccccagactgtccgcacgtgacacgttatgta
gggaagtttctccgacagcaggggcacgttgacaagtccattgctctgttgaacagagca
ctacagcgtacaagccagtctgccataatacaccatcaattggctctctgctacaagagg
aaaaagatctcagtatgcaagagtggaaggttccatggtaagggggctgagatccagcag
ctactccgtcagtgcattcaacatctggagatggctacttcactgaagccttccttcatc
tatgccatggctgagctggcactgctctacggagaggataaagacatcaccaaggcagag
gaactgttcaagaaaacctttgagaaagccctagctaagaatgacagtctgcaggtggtc
aacttgaactatggccagttccagcagtatcacaacaaatgtgaacctctggccatcaag
cactacacagaaggtttggaactacagaaagacactgccaatgggaagagttgtgcgcag
aaactgaagatgatcgcagagaggcgcatctcccaagaccccatggatggagaggcctgt
ggtattctggggtttgtctatagaatgcaggggaataaagaacaggccgtacagtggtat
gataaggctgttgtgcatgattgtaatgacaaatacctctctgcactctgtgaacttcgc
ctgtctcttcagcaataa
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