Oncorhynchus masou masou (cherry salmon): 135505163
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Entry
135505163 CDS
T10723
Name
(RefSeq) endothelial PAS domain-containing protein 1-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04137
Mitophagy - animal
omm04140
Autophagy - animal
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135505163
04137 Mitophagy - animal
135505163
04148 Efferocytosis
135505163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135505163
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135505163
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
bHLH_HIF1A
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
135505163
NCBI-ProteinID:
XP_064780368
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Position
18:complement(66869127..66875277)
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AA seq
386 aa
AA seq
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MTPERERRRIMSCEAARARRRAESQVLIDMSQLLPLPSSLRPQLDKPSIIRLTISYLRIH
TLLSGFADRQTWERRDEEGERELREEGEREMRERREEGNREAGDRELGERREERKKEMGE
TDLYLRILGGFVVVVTTEGDMIYLSDNIREYMGLTQVELMGHSIYDFTHPSDHKEIRDNL
DLTAGRSGCGGLRDFLMRMKCTVTHKGRTVNLRSAGWRVLQCRGCLKVCVSGPSLTCVLF
TCQPLSLTHTLLHTHTFTSHHSMDMRFTYCDQRVTGLLSYRPEELLGVSMYDLCHTLDLH
TLTKSHLNLCSKGQSVSGVYRVLVRGGGYMWVETHSAVISKPRPTQPHPSQPHQSRPSPP
LFVACVTYILSGVEEPTQLLSLGQMN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggagagagagaggaggaggataatgagttgtgaagcagcgagggctaggcgg
agagcagagtctcaggtgttgattgacatgtctcaactcctccccctcccttcctccctc
cgcccacagctagacaaaccctccatcatacgactaaccatcagctacctacgcatacac
acactgctctctggctttgctgaccgacagacgtgggagaggagggacgaggagggagag
agggaattgagggaggagggagagagggaaatgagggagaggagggaggagggaaatagg
gaggcgggagacagggagctcggggagaggagggaggagcgaaagaaggagatgggggag
acagatctatacctgaggattctgggtggctttgtcgtcgtggtaacgacagaaggagac
atgatctacctgtcagataacatcagagaatacatgggtttaactcaggtggagttgatg
gggcacagcatatatgatttcacacacccctctgaccataaggaaatcagagacaacctt
gacctcactgcagggcggagcgggtgtggaggactgagagactttctgatgaggatgaag
tgtacagtgactcacaaaggaagaactgtcaacctcagatctgccggctggagggtgctg
cagtgtcgagggtgtttgaaggtgtgtgtgtcaggaccctctcttacttgtgtgctcttc
acctgccagcccctgtccctcacacacacactcctacacacacacaccttcaccagccat
cacagcatggacatgaggttcacttactgtgaccaaagggtgactgggttgttaagttat
cgtccagaggagttgctgggtgtctctatgtatgatctgtgtcacactctggacttacac
actctgaccaaaagccacctgaacctgtgttctaagggtcagtcagtgagtggggtgtac
agggtgttggttagagggggagggtacatgtgggtagagactcacagtgctgtcatctcc
aaaccccgcccaacgcagccacacccatcacagccacaccaatctagaccctcaccgcca
ctcttcgtcgcttgtgtcacatacatcctcagtggtgttgaagagccaactcagcttctg
tctctgggccagatgaactga
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