Oncorhynchus masou masou (cherry salmon): 135505199
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Entry
135505199 CDS
T10723
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04136
Autophagy - other
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135505199
04136 Autophagy - other
135505199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135505199
03029 Mitochondrial biogenesis [BR:
omm03029
]
135505199
Membrane trafficking [BR:
omm04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135505199
Atg1 complex
135505199
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135505199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
135505199
NCBI-ProteinID:
XP_064780437
LinkDB
All DBs
Position
2:complement(43050497..43062294)
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AA seq
512 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHESKKALAGQLPGIERSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RMSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNVGHMHPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQSPVLVGAADFCHPSTLNAANPHQMGVPG
KEGGVPQQVPVQPCHGAQAEHRRVSSCPPADHVPATPSSSGEDAETSSRSIGVKSGSPCG
VLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPESSATSSPLQ
GSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLTIDVSS
QSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagtttataaagttt
ttcgctttgaagacagtacaggtgatagttcaagctcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaacctggcaatcaaagatatccca
gaagttacacatgagtcaaagaaagctctggccgggcagcttcctggcatcgaacggtcc
atgtgtgttgagatctccctcaaaacctcagagggagactcgatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaagtgtcctacactgtctataac
cgcatgtcattactgctcaagtcactactggctatcacaagggtaaccccagcctacaaa
ctctcacgaaagcaagggcacgactatgtcatactgtacaggatatattttggagaggtt
caacttacaggattgggagaagggttccagacagtgcgtgtgggagttgtgggaactcct
attggaaccatcaccttatcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctcccattatgggcataatcattgaccacttcgttgagcgcccc
tttggcaacgtgggacacatgcatccatgtaactacagagcacccggagaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagtctcctgtgcttgttggagctgct
gacttctgccacccctccaccttaaacgctgccaacccacaccagatgggagttccaggg
aaggagggcggcgtaccccagcaggtgcctgtgcagccttgtcatggagcccaggcagag
catcgacgagtgtcctcatgcccccctgctgatcatgttcccgccacgccctccagcagt
ggtgaggacgcagagacctcatcgaggagcattggggtgaagagtggctctccctgtggt
gtactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacgcag
gtaaccacagcaagcctggacttaccatttgcagcgtttgctcccagagcctatgacctc
gaggaaaatgaccctatggttcagccgccggagtcctcagccacgtcctctcccctgcag
ggcagtttgcactcccaaggctctggtgagagtggaggcccggcacaggacgactttgtt
atggtggactttaagcctgcgttctccaaggatgacctccttcccatggaccttggcaca
ttctacagagagttccagaaccccccacagctcaccagcctcactattgatgtcagttct
cagtccatggcagaagacctggactctcttcctgaaaaactggcagtatacgagaagaac
attgatgaatttgatgcatttgtggacacattgcagtag
DBGET
integrated database retrieval system
