Oncorhynchus masou masou (cherry salmon): 135505695
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Entry
135505695 CDS
T10723
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135505695
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
Motif
Other DBs
NCBI-GeneID:
135505695
NCBI-ProteinID:
XP_064780812
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All DBs
Position
19:complement(1301947..1317471)
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AA seq
811 aa
AA seq
DB search
MEDTDLHLSDEPMTGMLDTDSPESVESPAMEGNGEDFLPDLPVLTHAAEWTMDQDPHNLT
TVIHDSDSESDQSSPEVIEQHQVQQSDLGSVEQAVQHFQLASAELFQEERREHEDSDEQS
RSPQAEQQNQMEASSDESQDGHNTATEPLIQSEKLSDTGEQQQDPVQAQPPMVAEDSSPA
NMELEESKETEQVEPVEDPAVPTEPLIPSEYEKLAKGCEENPEDFNGWVYLLQYVEQENH
LGVVRKAFDAFFLRYPYCYGYWKKLADTEKKHGNAQVAEEVYRRGVHAIPLSVDLWLHYL
SFIKDNADPEDPETPSRIRAAYEHAVLAAGTDFRSDRLWEAYINWETEQERLANVTAIYD
RILGIPTQLYSQHLQRFKDHVQNNNPKHFLSEEEFVQLRVELAKANAVTVNEDGEEATPA
EPEGLPAGTEDLPDPAKRVTEIENMRHKVIELRQEVFNQNEQEVSKRWAFEEGIKRPYFH
VKALEKTQLSNWKEYLEFEIENGTPERVVVLFERCLIACALYEDFWMKYAKYLESYSIEG
VRHVYKKACTIHLSKKPNIHLLWAAFEEQQGNIEEARGILKSLEEVVPGLAMVRLRRVSL
ERRHGNLEEAEALLSEAMASGKNASETSFYAVKLARQLLKVQRSLTKARKVLLETIDKDQ
TSPKLYLNLLELEYSGDVQQNEAEILACFDRALSSPLPLDCRLTFSQRKVEFLEDFGSDI
NKLVTAYDEHQKLLKEHESTKRKAENGSQEPESKRQRTDDHPGSGHMMQGDNSAYNYNWY
QQQYNNWGQHSWGQYNQYAQQYNQYYPPPPT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgacctgcacctctcagacgagcccatgacggggatgttggacacagac
agccctgagagtgtggagtccccagccatggagggcaacggagaggacttcctccctgac
ctgcctgtcctcacgcatgctgctgaatggaccatggatcaggatccccataacctcacc
acggttatccacgactcggactcagagtcagatcagtcgtcgccagaggtaatagagcag
caccaggtccagcagtctgatctaggatctgttgaacaggcggtgcagcacttccagcta
gcgagcgctgaactcttccaagaggagcgtcgggagcatgaggattcagatgagcagtct
cgttctccacaggcagaacaacagaaccaaatggaggcatcgtcagacgagagtcaggat
ggacacaacacagccacagagcctttgatacagagcgagaagttgtccgacactggagaa
cagcaacaagatccagtccaagcccagccaccaatggttgcagaggatagtagcccagct
aacatggaactggaagaatccaaagagaccgagcaggtggaacctgttgaggatccagct
gtccctacagagcctcttatcccttctgagtatgagaagctggctaaagggtgtgaggaa
aaccctgaagacttcaatggttgggtctacctgctgcagtatgtggagcaagagaatcat
cttggtgtggtgaggaaggcgtttgatgcgtttttcttgcgctacccctactgctatggc
tactggaagaagttagctgacactgagaagaaacatggcaatgcacaggtggcagaggag
gtgtaccggcggggtgtgcatgccatccccctcagtgtggacctgtggctccactacctg
tccttcatcaaggacaacgctgaccctgaagacccagagacaccgtcacgcattagagct
gcgtatgagcatgctgtgttggcagcagggacagacttccgctctgaccgtctgtgggag
gcctacatcaactgggagacggagcaggagagattggccaacgtcacggccatctacgat
cgtatcctgggcatacccacccagctctactcacagcacctccagaggttcaaagaccat
gtgcagaacaacaaccccaaacacttcctgtcagaggaggagtttgtccagctcagggtg
gagctagccaaagccaatgcagtcacagtcaatgaggatggagaggaagcaacacccgca
gagcccgagggactcccagccggcaccgaggacctcccagatcctgctaagagagtgacg
gagattgagaacatgcgccacaaggtgatcgagttgcgtcaggaggtgttcaaccaaaac
gagcaggaggtcagcaagcgctgggccttcgaggaggggataaaacggccctacttccac
gttaaagccctggagaagacccagctcagcaactggaaggagtatctggaatttgagatc
gagaatggcactcccgaacgcgtggtcgttttgttcgaacgctgcctcatcgcctgtgct
ctctacgaggacttctggatgaagtacgcaaaatatctagagagctacagcatcgaggga
gtgagacatgtgtacaagaaggcgtgtaccatccacctatccaagaagcccaacattcac
ctcctgtgggccgcgttcgaggagcagcaggggaacatagaggaggcgcgcggcatcctg
aagtctctggaagaggtggtaccgggcctggccatggtgcgtctgcggcgggtgagcctg
gaacgtcgccacggcaacctggaggaggcagaggccctgctgagcgaggcgatggcatcg
gggaagaacgccagcgagacgtcattctacgccgtgaagctggcccggcagctgctgaag
gtgcagagaagcctcaccaaggcccgcaaggtgttgctggaaaccatagacaaggaccag
acgagtcctaagctgtacctgaacctgctcgagctggagtacagtggggacgtgcagcag
aatgaggctgaaatcttggcctgcttcgaccgcgccctgagcagcccgctgcccctcgac
tgccgcctcaccttctctcagcgcaaggtcgagttcctcgaggactttggcagcgacatc
aataagttagtgactgcatacgatgaacaccagaagcttctgaaagaacatgagtcgaca
aagaggaaagcagagaatggctcccaggagcccgagtcgaagagacagcgtacagacgac
cacccaggctcagggcacatgatgcagggagacaactctgcctacaactacaactggtac
caacaacagtacaataactggggccagcattcctggggacagtacaaccagtatgcccag
cagtataaccagtactacccccctccaccaacatga
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