Oncorhynchus masou masou (cherry salmon): 135505946
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Entry
135505946 CDS
T10723
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135505946 (katnb1)
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
135505946 (katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_RIG_1st
eIF2A
WDR54
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD_LRWD1
PROPPIN
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
RMC1_N
Ge1_WD40
Beta-prop_WDR11_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
135505946
NCBI-ProteinID:
XP_064781297
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All DBs
Position
2:45043399..45052715
Genome browser
AA seq
699 aa
AA seq
DB search
MAVANTTKTSWRLQEIVAHSSNVACLALGKNSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHNNPVECVKFNNSEEQVVAGSQSGSLRVWDLEAAKILRTLMGHKANICSLDFHPFGEYL
ASGSMDTNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTIKLWDLTAGK
MITEFTAHTGAINIIQFHPNEYLLASGSSDRTIKLWDLEKFKMIGSSGGEMGPVRCLAFN
LDGCCLYSGAVDSLRVYGWEPDRCFDVVPVGWGKVADLAICNHQLIGVSYNLANVSSYVV
DLTRVKKSGSVIQGVIQDDQPLTEPSPKGSTLRRNYERPLTTCSTQRVKQSSESERRSPE
GEIRSPSSEDEKESSAEIRNPEDYKEIFQPKSAISRTPPKNEPFPAPLEDESFVVRANQG
LVEVMTPMTDRQQPGLLKNLPVASSTPVLRVEPTVVATVPCPIPVVTARPPTNHAPAPHP
APPPVVAMAKAKPQPSVILSSRNEPIGLNVGDFLPPARNNRSSVLGDDEALAQIRKGHDT
MCVMLTSRHKNLDTIRAVWGSGDVKTSLDSAVSMKDLSIVVDILNIVNLKPSLWKLDLCT
SILPQIEELLQSKYESYMQTGCTSLKLILKRFWPLISDTLTAPPSVGVDITREERHQKCK
ACYKLLKNLSDLVKNKADQVGRHGSAFKELQLLMAPLDY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccaacaccaccaaaacatcatggagattacaggagattgtagcccactcc
agtaatgtggcgtgtctggccctggggaagaactctggccgtctgctagccactggggga
gaggactgccgagtcaacatctgggcagtcagcaaacccaactgcatcatgagtttgaca
ggccataataacccagtagagtgtgtgaagtttaataactctgaggagcaggtggtggct
ggctcacagtccggatcactgcgtgtatgggacctggaggctgcaaagatcctaagaact
ctaatgggacacaaggccaatatctgtagcttggacttccacccatttggggaatacctg
gcatctggttccatggacaccaacatcaagctgtgggatgtacggagaaagggctgtgtg
ttcaggtacaagggtcacactcaggcagtgaggtgcctggccttcagtccagatgggaaa
tggttggcctctgcgagtgatgacagcaccatcaagctgtgggacctgactgcagggaag
atgatcacagagttcacagcacacaccggagccatcaacatcatccagttccaccccaac
gagtatctgctagcgtcaggcagctctgacaggaccatcaaactgtgggatctggaaaag
ttcaagatgattggctcttcagggggagagatgggacccgtcaggtgtctggcctttaac
ctggatggctgctgtctgtacagtggagctgtggactctctccgtgtgtatggctgggag
cccgaccgctgctttgatgtggtgccagtgggctggggcaaggtggcagacctggctatc
tgcaaccaccagctgattggcgtgtcgtacaatctggctaatgtttcgtcctacgtggtg
gatctgacgcgggtgaagaagtctggctctgtgatccaaggcgtaatccaggacgaccag
ccgctcacagagccctccccgaaaggatccacgctgcgacgcaactacgagcgacccctg
accacctgcagcacacagagggtaaagcagagttctgagtcagagcggcgcagtcccgag
ggggagataaggagccccagcagcgaggacgagaaggagtcctccgccgagatccgtaac
cccgaggactacaaagagatcttccagccaaagagcgccatctctcgcacccccccaaag
aatgagcccttccctgcccccttagaagatgagagttttgtggtgagggctaaccaaggg
ctggtggaggtcatgactcctatgactgacagacagcagcccggcctgttgaagaacctt
ccagtggcatcgtccactccggtcctgagggtggagcctaccgtggtcgccacggtgccc
tgtcccatcccagtggtaaccgcacggccgccgactaaccacgcccctgcaccccaccca
gcccccccaccggtcgttgctatggcgaaggccaaaccccagcccagcgtcatcctctcc
tccaggaatgaaccaataggactcaacgtgggagatttccttcctcctgctcgtaacaac
cgatccagtgtgctgggtgatgacgaggctctggcccagatcagaaagggtcatgacacc
atgtgtgtgatgctcaccagccgacacaagaacctggacactatcagagccgtgtggggc
agcggggacgtcaagacctccttggactctgcggtctcgatgaaggatctctcgatcgtc
gtggacatcctcaacatcgttaacctcaaaccgtcgctatggaaactggacctgtgtacc
tctatcttgccccagattgaagagctgctgcaaagcaagtatgagagttacatgcagacg
ggttgcacgtctctgaagctgatcctgaagcgtttctggcctctcatctcagacacgctg
acagcgcccccctctgttggagtggatataacacgggaggaacgccaccagaagtgcaag
gcatgctacaagctgctgaagaacctcagcgacttggtgaagaacaaggccgaccaggtg
ggtcgccacggcagcgccttcaaagagctgcaactgctcatggcgccactggactactga
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