Oncorhynchus masou masou (cherry salmon): 135505991
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Entry
135505991 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: afadin-like
KO
K05702
afadin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04517
IgSF CAM signaling
omm04520
Adherens junction
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135505991
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135505991
04530 Tight junction
135505991
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RASSF8-10_RA
RA_3
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
135505991
NCBI-ProteinID:
XP_064781382
LinkDB
All DBs
Position
19:21099968..21234560
Genome browser
AA seq
1868 aa
AA seq
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MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERKLDLDEKPLVVQLNWNKDD
REGRFVLKNENDIIPKKAQSNGPEREKEGVIQNFKRTLSKKEKKKEKKREKEAHISDGDE
QALSREDGENSRLAAEVYKDMPENSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPD
SGGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCIARHTDDKS
GKEIILDDTECPLQIFRDWPNDRGDLVFQLKKRPPDFVPKKGRKPEDKGPRGKGMDVPLH
GSLPPEKLPYLVELSPGRGNHYGYYTYRHHEDGSDSRDKPKLYRLQHSVTEVGSDTTDDG
SIQLFGPGILPHHCKLMHTEGLVTVTPHSLEAETYVDGQRVTETTVLRSGATLQFGASHV
FKFVDPSYDHSMGKGGPGPMMRGRHKSGSVPETTFDLQGDLHSGTALSTSKSSGKLEMER
SSNGSERGMVKPMIRGEQQDSRSQDSLIPEVTLPASIEFRDNSEDTFLTAIINYTNSSTV
HFKLSPTYVLYMTCRYVMSSHYRPDIGPSERTHKVIAIVNKMVSMMEGVIQEIPEVDQKQ
KNIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVQCLQSDLSNY
MPAFLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNK
LVMEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQ
DVQNIHNTCFKLNSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREV
QLEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPHSPGTWTIHF
EGVDCDSHFSADNSDLQMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKG
GAADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLL
NQPSPMMPRASQGGRDKNGKLRPKSEGFELYNNSVQNGSPESPQADWQAYPEPKKISGEE
RLLKNRADHRSSPNVANQSQSPGGKAVYTRGPGTKITSVSTGNLCVDDEPSPPHPEAYPI
PTQTYPREYFTIPASKSTNRMDSAPGQIYADDRGPPGPMEDHHHNSIAMQRVDHSQEELC
DLPGGYPPTGLRPEDLVHLHQQQQREADYQRGSGEHWVNHHQVSSSVESSTSSQEHLNYS
SSSSNKTQSNHKSGPGRWKTPGPISPHPGPVAQSTRTDLPPPPPPPPVHYQDFELQPDLP
LPPPPSATQQQAAAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQVRNPAVPVA
HNNNQQGGTLPPPTQHQQMPPPRSPMQQVPHPYLPPQGQQQAQQQQPPRPEKLSTLPRAG
TLPPQGNPMDTVIRELLPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAREKLE
KQQQLHIVDLLDREIQDLQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEEDEEDDD
EDVDTMMIMQRLEAEKRARLQDEERRRKQQLEEIRKREAEDRAKQEEERRWREEERARRE
VDEKRRQEEEYYTRLEEGRRRQHEEAERKLLTPDEPGLYRPPLPRDYQPQPPPPTASPAT
TATNAPPPPPQRNTSYLKTQVVSPDALYTAKFVSYNDEEDEDTSGLAGFNSYTGNTTGVV
GSGEVYKDPREKWTKGGQEQENTLTEGAPESMTFKERQRLFSQGKEVSNKVKASRKLMEL
ENELNTKQ
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggaacggcggaaactagccgatatcattaaccactggaac
gccaaccggcttgacctgttcgagatcagccaacccaccgaggacttggagttccacggc
gtgatgcgtttctatttccaggaccgcgtagcggggaactttgccaccaagtgtatccgc
gtgtcctccactgccaccactcaggatgtcatcgagacgctggccgagaagttccggccc
gacatgaggatgctttcctcgcccaaatactccctctacgaggtccatgtcagcggggag
cggaagctggacctggatgagaagccactggttgtgcagctcaactggaacaaagacgac
cgcgagggacgtttcgtcctcaagaatgagaacgacatcatccccaagaaggcgcagagc
aacgggccggagagggagaaggagggagtaatccagaacttcaaaaggacactgtccaag
aaagagaagaagaaggagaagaagcgagagaaggaggctcacatttctgacggagatgag
caagcactgagcagagaagatggtgagaactccagactggcggcggaggtgtacaaggac
atgccggagaacagcttcacccggaccatctccaaccctgaggtggtgatgaagaggagg
cggcagcagaaactggagaagaggatgcaggagttccgtagcagcgacggcaggccagac
tctggggggacgttgaggatctacgcagacagtctgaaacccaatatcccctataagacc
atcttgctgtccacgacagacatggcagactttgctgtggtggaggccctggagaagtac
ggcctggagaaggagaacccccgggagtactgcatcgccaggcacacagatgacaagtct
gggaaggagatcatcctggatgatacagagtgtcctcttcagatcttcagagactggccc
aacgacagaggagacctagtattccagctgaagaagagacctccagactttgtgccaaag
aagggccgcaagccagaggacaagggccccagggggaagggcatggacgtgcccctgcat
gggtctctacccccagagaaactgccttacctggtggagctcagcccagggagggggaat
cactatggctactacacctatcggcaccacgaagacggctcagactccagggacaaaccg
aaactctaccgcctgcagcacagtgttactgaggtgggctcagacactacagacgacggc
tccatccagctgtttggtccaggtatcctgccccaccactgtaaactgatgcatacggag
ggtttggtgacagtgacaccacacagtctggaggctgagacttacgtggatggccagcgt
gtcaccgagaccaccgtgctgcgaagcggagccacactgcagtttggcgcctcccacgtg
ttcaagtttgtggaccccagctacgaccacagcatgggcaagggagggcctggaccaatg
atgagaggcaggcacaagtcaggaagtgttcctgagacgacctttgacctgcaaggggac
ctccacagtgggacggccctctccaccagcaagagctcagggaagctggaaatggagcgt
tcatccaacggcagcgagagaggcatggtcaaacccatgatccgcggggagcagcaggac
agcaggtcccaggacagcctgatcccagaagtgacgctgccggccagcatcgagttcagg
gacaactccgaagataccttcctgacggccatcatcaactacaccaacagctccacggtg
cacttcaagctgtcccccacctacgtgttgtacatgacctgtcgctacgtcatgtccagc
cactaccggcccgacatcggcccctcggagcgcactcacaaagtcatagccatcgtcaac
aagatggtgagcatgatggaaggagtcatccaggagattcctgaagtggaccagaagcag
aagaacattgcgggggccctggctttctggatggccaatgcctcagagctgctcaacttc
atcaagcaggacaaggatctgtcgcgcatcacactggacgcccaggacgtgctggcgcac
ctcgtccagatggccttcaagtacctggtccagtgtctacagtctgacctgagtaactac
atgcctgccttcctggacgacccagaggaacagaaccctcaaaggcccaaaatagaggat
gttttgcacacactgacgggcgccatgtcgctgctgcgtcgttgccgtgtcaacgcggcg
ctgaccatccagctgttctcccagctcttccacttcatcaacatgtggctgttcaacaag
ctggtgatggaggctgactctggactgtgttcacactactggggcgccatcctccggcag
cagctcagccacatcgaggcctgggcagagaaacagggcctggagctggctgctgactgc
cacctcagtcgcatcgtacaggctacgactctcctcaccatggacaagtactccatgcag
gacgtgcagaacatccacaacacctgcttcaagctgaactccctgcagctcaacgccctc
atgaccaactaccactgtgctcccgacgagccttacatccccccagagcttatagaccac
gtggttgccgtggcggagaacacagcagatgagctggctcgtagcgacggccgagaggtc
cagctagaggaggaccccgacctgcagctgcccttcctgctgcccgaggatggctactcc
tgtgacgtcgtgaggaacattcccaacggattccaggagttcctggaccccctttgtcag
agaggattctgtcggctaacccctcacccccactcccctgggacctggaccatccacttt
gaaggagtcgactgcgacagccacttctctgcagacaactcagacctgcaaatgcggaag
gaaccggaagttgtgacggtcaccctgaagaagcacaatggcatgggcctcagcattgtg
gctgccaagggtgctgggcaggacaagctcgggatctacatcaagtctgttgtgaaggga
ggcgcggctgacatggacgggcgtctggctgcaggggaccagctgctgagtgtggacggc
cgcagcctggtgggcctctcccaggagagggctgcggagttgatgacgaggacaggctct
gtggtgacactggaggtggccaaacagggagccatctaccacggcctggccacgctcctc
aaccagccttctcctatgatgcccagagcatcacaaggagggcgtgacaagaatggtaaa
ctgagaccaaagagcgaaggctttgaactgtacaacaactcggtccagaacggctctcca
gagagcccccaggccgactggcaggcctacccagaaccaaagaagataagcggggaggag
aggctactgaagaaccgggccgaccaccgctccagccccaacgtggccaaccagagccag
agtccgggagggaaggccgtctacacacgaggacctgggaccaagatcacctctgtctcc
acgggcaacctgtgtgttgacgacgagccctctcctccccatccggaggcctatcctatt
cccactcagacctaccccagggaatacttcaccatcccagcctccaagtctacgaaccgg
atggactcggccccaggacagatatacgctgacgacaggggtcctcccggccccatggaa
gaccaccaccacaacagcatagctatgcagcgggtggaccactctcaggaggagctgtgt
gacctcccagggggctaccctccaaccggcctgcgtcctgaggacttggtccacctgcac
cagcagcagcagagagaggctgactaccagcggggcagtggggaacactgggtcaaccac
caccaggtctcctcctctgtggagtcctccacctccagccaggagcacctcaactactcc
tcgtcctcctccaacaagacccagagtaaccacaagagtggcccgggacgctggaagacc
cccggccccatctctccccacccaggccccgtggcccagtccacacgcacggacctccct
ccccctccaccgccccctcccgtacactaccaggactttgagctccagcccgacctgccc
ctgccccctcctccctcggccacccagcagcaggccgcagctgccgaccgcaagaagcgc
gaggagcagcagcgctggtatgagaaggagaaggcccggttagaggaggagagggagagg
aagaggagggagcaggagaggaagctgggacaggtccgtaacccagctgtgcctgtagcc
cacaacaacaaccaacaagggggcacactcccccctcccacacagcaccagcagatgccc
cctccccggtcccccatgcagcaggtgccccatccctacctccccccccagggccaacag
caggcccagcagcagcaaccccccaggccagagaaactgtccactctgcccagagcgggc
accctgccccctcagggtaacccaatggacacagtgatcagagagctgctcccccagcag
cagccccgcaccatcgagcgccgggacctacagtacatcaccatcagcaaggaggagctg
tcttccagcgacagcctgtccccagacccctggaagagggacgcccgggagaagctggag
aagcagcagcagctgcacatcgtagatctgctggacagggagatccaggacctgcaggcc
aagccggagcgtacggccgaggagagcgaccggctcaggaagctgatgctggagtggcag
ttccagaagagactgcaggagtccaagcagagtgatgaggaagatgaggaggatgacgac
gaggacgtggacaccatgatgatcatgcagcggctggaagcagagaagagagcaaggttg
caggacgaggagcggcggaggaaacaacagctggaggagatccgtaagcgcgaagcggag
gaccgggccaaacaggaggaggagagacgctggagagaggaggagagggccagacgagag
gtcgatgagaagaggaggcaggaggaggagtactacacacgtctggaggaagggcggcgc
cggcagcacgaggaggccgagcgcaagctgctgacgcctgacgagcctggtctgtacaga
cctcccctccccagggactaccagcctcagcccccccctcccactgcatcccccgcaacc
actgccactaacgctccaccacccccgcctcagagaaacacttcctacctcaaaacccag
gtcgtctcccctgacgccttgtacactgccaagtttgtctcgtacaatgacgaggaggat
gaggacacttcaggcctagcaggatttaattcatacactggaaacacaaccggggttgta
ggatcaggagaagtttacaaggacccgcgagagaagtggacgaaaggtggtcaagaacag
gagaacactttaactgaaggagccccggagagtatgacattcaaggagcgccagaggctc
ttttcccaagggaaggaagtatccaacaaagtcaaggcctcacgaaaactcatggagctg
gaaaatgaactcaatacaaagcagtag
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