Oncorhynchus masou masou (cherry salmon): 135506446
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Entry
135506446 CDS
T10723
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
135506446 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135506446 (cnga1a)
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
135506446 (cnga1a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
DUF2207_C
DDHD
Motif
Other DBs
NCBI-GeneID:
135506446
NCBI-ProteinID:
XP_064781905
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All DBs
Position
20:2011923..2031630
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AA seq
799 aa
AA seq
DB search
MHVLPYNLGLHFLITGHTPDWCFSLIKQRIRKTRVNTLSEISGVVKDSTVTGVTIPQLVG
LEDGTVLVESYGWRQHLTPYFRPVPQFKQYQHISFDALEPGVFVAKECSYSVGTRFQLQR
SADIIPPIDGRLFNVNNSNNNEEEEKKKKKKEKKEKKEKKEKASKTCIGFLRKKKEKKKQ
KEQEEKEKEEKEKEEKEKEEKEKKEKEEKEKKEKEKKEGPKEGFFINPAGSLYYNWLFII
TIPVMYNWTMIIARACFEELQHNHLVTWMILDYISDVLYLADMAFRTRTAYLEQGLLVKD
KKLLLERYISSLQFKLDAVSMLPTDVFYIYLGINYPEIRLNKLLRITRMMEFFTRTETKT
NYTNLFRISNLVMYIIIIIHWNACLYYSFSKSIGFGSDPWVYPDLNDPEEPEFGELGRKY
SFSLYWSTLTLTTIGETPSPELDSEFFFHVLDFLVGVLIFATLVGNISSMISNISAARVE
FQARIDNIKQYMQKWKVDKELELRVITWFDYLWTNDKAQDERETLRYLPDKLRAEIAINV
HLDTLKKVRIFADCEAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIVKEGKLAVVAD
DGVKQFCVLGDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMESLTEYP
EAKGMLEEKGRQILLKDGLLELDPSKIIPETTEIEEKVNRMYSNLELMQTKLKKLLGDYS
TSQRATRERIAEIERLTGEVVAEEDLDEEEKEGGEEEKEGEEEEKKEGEAEEKKDEEKKE
EEEEEKKEEEKEEEEEEKK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgctcccctacaatctgggccttcacttcctgatcacaggccacacccccgac
tggtgcttcagcctcatcaagcagcgcatcagaaagaccagagtgaacactttgtctgag
atttctggtgttgtgaaagacagcactgtgacaggggtcaccatcccacagcttgttgga
ctggaagatggtacagtgctggtggaaagctacggctggcgacaacacctgactccgtac
ttcaggccggtgccacagttcaagcagtaccagcacataagcttcgatgctctggagcct
ggtgtttttgtcgccaaggagtgttcgtactcagtcgggaccaggtttcagctgcagcgc
agcgctgacatcattcctcccatagatgggcgtctgttcaatgtgaacaacagtaacaac
aatgaggaggaggagaagaaaaagaagaaaaaggagaagaaagaaaagaaagagaaaaaa
gaaaaagcttcaaaaacttgtattggttttctcaggaaaaagaaagaaaagaagaagcag
aaagagcaggaggagaaagaaaaggaggagaaagaaaaggaggagaaagaaaaggaggag
aaagaaaaaaaggaaaaagaggaaaaggagaagaaggagaaagagaaaaaggaggggccc
aaagaagggtttttcatcaatccagctggcagtctgtactacaactggctgttcattatc
acaataccagtcatgtacaattggaccatgataatagccagggcctgctttgaggagctg
cagcataatcacctagtcacctggatgattctggattacatctctgatgtcctctacctg
gctgacatggccttcaggaccaggacagcctacctggagcaaggcctgctggtcaaagac
aagaagctgctgttggagcgttatatcagcagcctccagttcaagctggacgccgtctcc
atgctgcccaccgatgtgttttacatctacttggggatcaactaccccgagatccgcctc
aacaagctcctccgaatcacgcgtatgatggagttcttcacccgcaccgagaccaagacc
aactacaccaacctcttccgcatctccaacctggtcatgtacatcatcatcatcatccac
tggaacgcctgcctctactactccttctctaagtccatcggcttcggctctgacccctgg
gtctacccggacctgaatgacccagaagagccagagttcggggaactggggaggaagtac
tccttcagcctctactggtccacgctgacgctgaccaccatcggcgagacgccatcaccg
gagctggactcagagttcttcttccatgtgctggacttccttgtgggtgtgcttatcttc
gccaccctggtgggcaacatcagctccatgatctccaacataagcgccgcgcgggtcgag
tttcaggcacgcatcgacaacatcaagcagtacatgcagaagtggaaggtggacaaggaa
ctggagctgcgagtcatcacgtggttcgactacctgtggaccaacgacaaggctcaggac
gaaagggagacgctgcggtacctgcccgacaagctcagggccgaaatcgccattaacgtc
cacctggatactctcaagaaggtccgcatcttcgctgactgcgaagcaggcctgcttatt
gagctggtgctcaagttgcagcctcaggtcttcagccctggcgactacatctgtaagaag
ggtgacatcggccgtgagatgtatattgtcaaggaggggaagctggcggtggtggctgac
gatggcgtcaagcagttctgcgtgctgggagacggcagctactttggggagattagtatc
ctagcgataaagggttctaaggcagggaaccggaggacggccaacatccgcagcattggc
tactcagatctcttctgcctgtccaaggatgacctgatggagtcattgaccgagtacccg
gaagccaagggcatgctggaggagaaaggtcgtcagatcctgctgaaggacggcctgctg
gaactggacccttccaaaattatccccgaaaccacagaaatcgaggaaaaggtgaaccgc
atgtacagcaacctggagttgatgcagaccaagctgaagaagctgctgggagactacagc
accagccagagggccacgagggaacgcatcgctgagatagagaggctgactggagaggtt
gtagcagaggaggacctagatgaggaggagaaggagggaggggaggaggagaaggaggga
gaggaggaggagaaaaaggaaggggaggcagaagagaagaaggatgaggagaagaaagag
gaggaggaggaagagaagaaagaggaggagaaggaggaggaggaggaggagaagaagtag
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