Oncorhynchus masou masou (cherry salmon): 135506766
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Entry
135506766 CDS
T10723
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135506766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135506766
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135506766
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
HECT type E3
135506766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
135506766
NCBI-ProteinID:
XP_064782206
LinkDB
All DBs
Position
20:6231329..6240336
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AA seq
990 aa
AA seq
DB search
MISWGEDCRNGFGLVKPNGLDTTKADINLIHLKSKIQGLSAGNSVVAFIRNNGRLVSVAR
IQEDQDGRRFTGKLKTVKCKETIRALSCGDSHAVLLSEEGRVLCLDKANILRPLDNLCNR
QVAQVACGDQHSILLTQDGQVFTWGQNTSGQLGLGWGEPRDMSLSPKPLKSLSGIPLVQI
TAGGDHSFALSLSGAVFGWGKNTAGQLGLGDTTNRCAPAPVDCLNLKKTVLISCGGEHTA
VLTKGGVVFTFGSGRYGQLGHNSLRDELRPRVVGQLCGLKVTQIACGRHHTLAFVEPSNK
IYSFGCGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCTLGQESGER
PNNLRSSVGKMTRQAIDEEIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDKSCD
KHYQTSPKQSGLDYSLVQGAFRKLAKKGKVLTEVEAVVQHTLLPSLNEEPIGVEGLRVYL
VLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLVDWWSSQKLSVTTKHIRVWKKAL
SVILTTTRIRTPGLKHLFQVLDHLHRANQKACGTQTVPDSSFCLEDIEFKFLKEDVKLWR
SWSKQDVDQTPAIFCCYPFLMNLQSKINVFNINAALTKVSSAPALFFELRLNRASLIEDT
FHQLSVAYHSTFKRSLVVYFDEDAKLTDVYKRDFFLHLFDKLLVPESGMFMYNDTNTLAW
FPAMPRVEEKRYFLFGVLCGMALYNNNMVHLPFPMAFFKKLVNINPSLEDLREFSPIEAG
SLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKETGKLVTSANKKEFVDTYVNYIFNQS
VEVVFEEFRKGFFKVCDKDVVEFFQPEELRGVMVGKENFDWETLKRNTVYEGEYHAGHPN
IVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMNQIRMRVQTLLNSSQQHFPEALTCHS
LLQLPIYPSKETLQSRLIEAVGHNRGFWNE
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggattgtcgtaatggctttggtttagtgaagccgaatggttta
gatacgaccaaagcggatattaatttgatacaccttaaatctaaaattcagggtctgtcc
gcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtgtctgtcgcacgg
attcaagaggaccaagatgggagaagattcacagggaaactgaagactgtgaaatgtaag
gagacgattcgggctctgagttgtggagattcgcatgctgttttactgtctgaagagggt
cgggttctctgcttggacaaagccaatattctcagaccattggataacctatgtaaccgc
caggtcgctcaggttgcatgtggagaccagcattcaattttactaactcaggatggtcag
gttttcacatggggtcagaacaccagcggtcagctgggtttggggtggggcgagccacgc
gacatgtccttgtcccccaagcccctgaagtctctatcagggatccccctggttcagatc
actgcagggggagaccacagcttcgctctgtccctttctggtgctgtgttcggctggggc
aagaacaccgccgggcaactgggactaggggacacaacaaacagatgtgctccagctcct
gttgattgcctgaatctgaagaagactgttttgatttcatgtggaggagaacatactgcc
gttctgacaaagggaggtgtggtgttcacatttggctcaggccgctatggacagcttgga
cacaactctctccgagatgaactacgacctcgagtggtggggcaactttgtggattaaag
gtgacccagatagcctgtggaagacaccacacattagcatttgtggagccctccaataag
atttactcatttgggtgcggagagcaagggcagctgggaaatggagtaaagattgatcag
tctgtgccccttccagtacaactgccagaccagattgatgaccagaaaattgaacacatt
tttgctggaggaaaccattcctttgcgttgtgcactcttggtcaggagtctggagaaagg
cctaacaatctcaggtcaagtgtgggcaaaatgacacgacaagctatagatgaagaaatc
attgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacagaaggaaatc
acaaaaatgttttcttctgcatcgtgtttaaatgggagctttcttgataaaagttgtgac
aaacattaccaaacctcaccaaaacagtctggcctggattattcactcgtccaaggcgca
ttccgaaagctggcgaaaaagggcaaagttttgactgaggttgaagctgttgtccagcac
acacttcttccctccctgaatgaggagcccattggagtggagggcttgagggtctacctg
gttctccctgagctcctgagggtccttcacaaacagcacagaaggacagatctcaccgaa
gccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctcgttgactgg
tggtcctcacagaagctctctgtcacgaccaagcacattagggtgtggaagaaggcccta
tcggtgattctgacaactacccgtatccgcacccctggcctcaaacacctgttccaggtc
ctcgaccatctccacagagcaaaccaaaaggcttgtgggacccagactgttcccgacagt
tccttttgtttggaggatattgagttcaagtttctaaaggaagatgtgaagctttggcgt
tcttggtcaaagcaggatgtggatcagacacctgccatcttttgttgttacccattcttg
atgaatctgcagagcaagataaatgtttttaacattaacgccgcactcacaaaggtaagc
tcggcacctgctctgttctttgagctgagactgaatagagcatcactcatcgaagacact
ttccatcaactgagtgtagcctatcacagtaccttcaagaggtcccttgtggtgtatttc
gacgaggacgcgaagctgacagatgtctacaaaagggacttcttcctccatttgtttgat
aagctgttggtacccgagtctgggatgttcatgtacaacgacaccaatacgctggcctgg
ttccctgcaatgcctagagtggaggagaagcgttatttcctgtttggggttctgtgtggg
atggccctgtacaacaacaacatggtgcacctccccttccccatggccttcttcaagaag
ctggtgaacatcaatccctctttagaggacctgagagagtttagccccattgaagcaggg
agtttgcagtacatcttggattaccctgatgatgatgttgaaaacatggacatgactttc
tcagtgatgtggggtgatgtagcggtggaacttgatcccaaagaaactggaaaactcgtc
acaagtgccaacaagaaggagtttgttgacacctatgtgaactacatcttcaaccagtca
gtagaggtggtgtttgaagagttcaggaaaggcttcttcaaggtgtgtgacaaggacgtg
gtggagttcttccagccagaggaactgaggggagtgatggtggggaaggagaatttcgac
tgggaaacgctgaaacggaacactgtgtatgaaggagagtaccatgctgggcatcccaac
atcgtcacattctgggaggtgtttgaggaactgacagaggatcaaaagaaagcgttcctg
ttgttcctgactggctgtgatcgtgtgcccatcctgggtatgaaccagatcaggatgagg
gtccaaacccttctcaactcctcccaacagcatttcccagaggcgctgacctgtcactct
ctgttgcagctgcccatctacccctccaaagagacactacagagcaggcttatagaagct
gttggccacaacagaggcttctggaatgaataa
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