Oncorhynchus masou masou (cherry salmon): 135507192
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Entry
135507192 CDS
T10723
Name
(RefSeq) huntingtin-like
KO
K04533
huntingtin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135507192
04131 Membrane trafficking [BR:
omm04131
]
135507192
03029 Mitochondrial biogenesis [BR:
omm03029
]
135507192
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135507192
Membrane trafficking [BR:
omm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135507192
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135507192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
135507192
NCBI-ProteinID:
XP_064782852
LinkDB
All DBs
Position
20:23683031..23873509
Genome browser
AA seq
3166 aa
AA seq
DB search
MATMDKLMKAFESLKSFQQQQGPPTAEETAQKQKKELATTKKDRVAHCLTICENIIAQSL
RTSPEFQKLLGIAMEMFLLCSDDRESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRITKRLEEPVQETLSAAVPKI
MTALGHFANDGEVKVLLKSFVANLKSTSPTIRRTAASSAASVCQHSRRASYFYTWLLNVL
LGLLVPVDEEHPNHLVLGVLLTLRYLMPQLQQQDRTTSLKGSFGVMRKEADLQPTPGQLL
QVYELTLHYSQHGDHNVVTASLELMQQMFRTPPPELLHMLITPGSVPHASVFRRDVERRA
HSGSILEFIAGGGSSCNSPLLLRKQKGKMLSGEEEGLEDDPERAEVTTGAFTASVAGADA
TAQVVDIITQQPRSSQHALQPGDSVDLGGASSEQGTTALGTCGGEGGAGTPESPNDNAAD
EDMLSHSSSGANVTPETADYATPENAEMPDGPLLDPLGDPSLPPSADSSQTTTEGPDSAV
TPSDVAELVLDTSESLYSGMQIGTLQDEEEEGAVPSSHPEPFSQSALALSRPHLLEGRGH
NRQASDSSVDQFIPKEETVETTELEDKPSRIRGPIGHYTDQGAEPLVHCVRLLSASFLLT
GQKNGLVSDKEVRVSVKVLAVSCIGAAAALHPEVFFNSLYLEPLDGVTQQEQQYISDVLC
LVAHGDPQVRGAAAVLCGAVIHSALTKTRYNIHAWMTSVHASTGNPLSLVDLVPVLQNTL
KDESSVTCKMACSAVRHCIMTLCSSTLSELGLHLLVDLLTLKDCSYWLVRTELLDTLAEI
DFRLVNFLEKRTESLHKGEHHYTGLLRLQERVLNGVVIHLLGDEDPRVRHIAAATVSRLV
SVLFYECDQGQADPVVAIARDQSSVYLQLLMHETLPPSHFTVSTITRTYRGYNLSQGVSD
VTVENNLSRVVSAVSHALTSSTSRALTFGCCEALHLLTTTYPACTWSMGWHCGYVSSTVT
HPNRSNLNRSRARSHSLSQPGSGPLSQPGSGPLEEGRRSLTVGMANMMLSLLSSAWFPLD
LSAHQDALLLAGNLLAATAPQCMCSPWAGEEEGGPVPGKTEEPWAAVGERPLVVLVEQLF
SHILKILNICAHVLDDTPPGPVVKATLPSLANAPSLSPIRRKGKEVAEPSNIPMSPKKGN
ETNTGRPADSSGSTANVNKSTTLGSFYHLPTYLKVYDVLKATHTNYKVTLDLHSTNEKFG
GFLRSTLDVLSQLLEMATLHDIGKCVEEVLSYLKLCFSREPLMATVCVQQLLKTLFGTNL
ASQYEGAQGGPSRSQGKALRLGSSSLTPGLYHYCFMAPYTHFTQALADASLRNMVQAEQE
QDASGWFDVMQKVSNQLRSSITNVTKQRGDKNAIHNHIRLFEPLVIKALKLYTTSTSVAL
QRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIVPNIFFFLVLL
SYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKEL
DTQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMIGKQQMH
LDSPEALGVLNTLFETVAPSSLRPVDMLLKGMFTTPATMANVNTVQLWVSGVLAVLRVLI
SQSTEDIILSRVHELSLSPPSLSLSPPSLSPLLLSCPTIRHLRDDSSLSSPPPLAPPATV
APDNQEANGERVLPEETFARFLLQLVGVMLDDISTRQVKVDMTEQQHTFYCQQLGTLLMC
LIHIFKSGMFRRITAAATRLLKGEAVLGAGPGVFYPLEGLNAMVGCLVTTHPSLVLLWCQ
VLLIINYTNYSWWTEVHQTPRRQSLSCTKLLSPHSSGGVEEERPEARLAMCNREIVRRGG
LILFCDYVCQNLHDSEHLTWLIVNHVRDLIDLSHEPPVQDFISAVHRNSAASGLFIQAIQ
SRCDHLSTPTMLKKTLQCLEGIHLSQSGSLLMLYVDKLLNTPFRVLARMVDTLACRRVEM
LLAETLQNCLVQLPVEELDRIQEYLQISGLAQRHQRFYSLLDRFRATVAEDTSSPSPPVT
SHPLDGEPPPAPELVKADKEWYVALVMSQCCLRGDGSFLETTELLTKLPPDDLSTIMTCK
DFNLSLLCPCLSLGVQRLTRGQGSLLLETALAVTLDHLSVVTQLLPVPHRSFLLPAKPDP
AEPYWDKLAVVYGEPGLYPRVMSLCRALSQYLLCVGQLPSPLQIPEDKQHLITTFTTMAT
ELVVWRVLQDRVPLSVDLQGALSCLCLALQQPCVWNTLSTAPYKTHTCSVIHCLRLLITA
VAVGPGDHLLHPGRKRTTGSDGDSDQVHSPNTDNVCERRSCEIMAELVEGLQSVLSLGHH
RNSGIPAFLTPMLRNIIISLSRLPLVNSYTRVPPLVWKLGWSPRPGGEFGTTLPEIPVEF
LQEKDVFREFLYRINTLGWSSRTQFEETWATLLGVLVTQPISMDQEEEREQEEDLERTQL
NVLAVQAITSLVLSSMTLPTAGNPTVSCLEQQPRNKTLKVLDTRFGRKLSVIRGAVEREI
QAMVSKRDNVHTHHPYHTWDPVPSLSAVSPGTLISHEKLLLQINTEREMGNMDYKLGQVS
IHSVWLGNNITPLREEEWGEDEEDETDTPAPASLPTSPINSRKHRAGVDIHSCSQFLLEL
YSQWLLPGSPSNRRTPVVLISEVVRSLLAVSDLFTERNQFDMMFTTLMELQKSHPAEDEI
MNQYLVPALCKAAAVLGMDKATSEPVCRVLELTLHSTHLPSRMGALHGLLYVLECDLLDD
TVKQLVPAVSDYILSNLRAVAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFTAGVIQ
MCGVMVSASEDSTPSVIYHCVLRGLERLLLSEQLSRMDGEALVKLSVDRVNMPSPHRAMS
ALGLMLTCMYTGKEKASPGRPAGAVDPQAPDSESVIVAMERVSVLFDRVRKGLPSEARVV
ARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHATGQSSMVTDWV
LLSLSNFTQRTPVAMATWSLSCFFISASTSQWVSALLPHVTSRMGKSEVVDISLFCLVAL
DFYRHQLDEELDRRAFQSVFQTVASPGNTYQQLLDCLQSIHQDTSL
NT seq
9501 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggataaattaatgaaggcctttgaatctctcaagtccttccaacaacaa
cagggaccgccgacggccgaggagacggctcaaaaacagaagaaagagctggccaccacc
aaaaaggacagagtggcccactgcctgaccatatgtgagaacatcatagcccagtctctg
agaacctctccggagttccagaagcttctgggcatcgccatggagatgttcttgctgtgc
agcgacgacagagagtcggacgtcaggatggtggcagacgagtgcctgaacaaaatcatc
aaagcgctgatggactccaacctgcccagacttcagctggagctctacaaagaaattaaa
aagaacggtgcctctcggagcctgagggctgctctctggaggttcgctgagctagcacac
ctcgtcagaccacagaaatgcagaccgtacctggtgaacctcctcccctgtctgaccagg
atcacgaagagactggaggagccagtccaggagaccctgtcggctgccgtgccgaagatc
atgactgctctgggacacttcgctaacgacggagaggtcaaggtgttgttgaagtcgttt
gtggccaacctgaagtccacttctcctacgatccgtcggacggccgccagctcggcggct
agtgtctgtcaacactcgagacgggcctcctacttctacacctggctgctcaacgtcctg
ctgggtctgttggtccctgtcgatgaggaacatcctaaccacctggtcctgggggtgttg
ttaacccttcgctacctgatgcctcaactacagcaacaggacaggaccaccagcctgaaa
ggaagcttcggagtcatgaggaaggaggccgacttacagcccacgcctggacaactactg
caagtctatgagttgactctccactacagccagcatggcgaccacaacgtggtgacggcc
tctctggaactgatgcagcagatgttccggactcctcccccggagcttctgcacatgctc
attacgcccggcagcgttccgcacgccagcgtgttccgccgggacgtggagagacgcgcc
cactccggcagcatcctggagttcattgccgggggcgggtcttcctgtaatagtccactc
ctcctcagaaaacagaaaggcaagatgctgtcgggggaggaggaggggttggaggacgac
cctgagagggcagaggtcaccactggggcctttacagcctctgtcgcgggcgccgacgcc
accgcccaggtggtcgacatcattacccagcagccccgctcctcacagcatgctctgcag
cccggcgactccgtggacctcggtggcgcctcctcggaacaaggaacgactgccctcggg
acctgcggcggcgagggaggggcggggactcccgagtcgcccaatgacaacgcagcggac
gaggacatgctcagccacagctccagtggggcaaacgttaccccggaaacggccgactac
gccacaccggagaacgcggagatgcccgacgggcccctgctggaccccctgggagacccc
tcgctgcccccgagcgccgactcttcgcagaccaccacagaggggccggactcggctgtc
actccttcagacgttgctgaactcgtgttggacaccagtgagagtctgtattcagggatg
cagattggaactttacaggatgaggaagaagagggagccgtaccttcatcacaccctgag
cccttctcccagtccgcactggctctgagtagaccccacctcctagagggcagaggtcac
aacagacaggcgtcagacagcagtgtggatcagttcataccaaaggaggaaacagtggag
accacagagctggaggacaagccatcgaggataaggggtccgattggccactacacagac
caaggggcggagcctctggttcactgtgtgcgactcctctctgcctccttcctgctgact
ggacagaagaatgggctggtctctgataaagaggtccgtgtcagtgtgaaggttctagca
gtcagctgtatcggagcagcagctgcccttcatcctgaagtcttcttcaactctctgtac
ctggaaccactggacggagtgacacagcaggagcaacagtatatcagcgatgtgttgtgt
ctggttgctcatggagaccctcaggtcagaggtgctgcagcggttttgtgtggcgccgtt
atccactccgctctcaccaagacgcgttacaacatccacgcctggatgaccagcgtccac
gcctctacaggtaacccgttgtccctggtggatctagttcctgtactacagaacactcta
aaggacgagtcctctgtcacctgtaagatggcctgctctgcagtcaggcactgcatcatg
actctttgtagcagtactctgagtgagttgggtctgcatctcctggttgacctgctgacc
ttaaaggactgttcctattggctggtcaggacggaactcctggacactctggcagagata
gatttccggttggtgaacttcctggagaagagaacagagagtttacacaaaggagagcat
cactacactgggttgctaaggttacaggagagagtgttgaatggcgttgtgattcatttg
ttgggagacgaagaccctcgagtacgacacatagccgctgctactgtcagcaggctggtc
agtgtgttgttctatgagtgtgaccagggtcaggctgacccggtggtggctatagccaga
gaccagagctctgtgtatctgcagttactgatgcatgagacgctaccaccttcacacttt
actgtctctaccatcaccaggacgtatcgtggttataacctgtctcagggagtgtcagac
gtcactgtggagaataacttgtcaagagtcgtctctgccgtgtcccacgctctcacctcc
tctacgtcacgggccctcacttttggctgctgtgaggcgctgcatcttctgaccaccacc
tacccagcatgcacctggagtatgggctggcactgtggttacgtcagctccaccgtcaca
caccccaaccgatccaacctcaaccgctcccgggcacgctcacacagcctctcccagccc
ggctcaggtcccctctcccagccaggctcaggtccgctagaggaagggaggaggagtcta
acagtagggatggctaacatgatgttgtctctactgtcctctgcctggtttcctctggac
ctctctgctcaccaagatgctctgctgctggccgggaacctgctcgctgcgacggctcca
cagtgcatgtgtagtccctgggctggggaggaggagggagggccggtccccggtaagaca
gaggagccctgggcagcggtgggggagcgccccctggtggtcctggtggaacaactcttc
tctcacatcctcaagatactcaacatctgtgcccacgtgctggacgacactccgcccggg
cccgtcgtcaaggccaccctgccgtccctagccaacgctccctccctcagccccatcaga
aggaaaggcaaggaggtcgcagagccaagcaacattcccatgagccctaagaaaggcaac
gagaccaacactggcaggccagcggacagctcggggtccacggctaacgtcaacaagtcc
acaaccctgggaagcttctatcatctccccacctacctcaaagtgtacgacgtcctcaaa
gctacacacaccaactataaggttacgttggacctccacagcaccaacgagaagttcgga
gggttcctgcgttctacgctggacgtcctgtctcagctgctagagatggccacgctacac
gacatcggaaagtgtgtggaagaggtcctcagctatctgaaactctgcttctccagggaa
cctctgatggccacggtctgtgttcaacagttattgaagacgttgtttggtaccaacctc
gcctcccagtacgagggggcccagggcggtccgagtcgctcccaggggaaggctctccgt
ctgggctcgtccagcctgacacctggcctctatcactactgcttcatggctccctacaca
cacttcacccaggccctggccgacgccagcctcaggaacatggtgcaggctgagcaggag
caggacgcgtctgggtggtttgatgtaatgcagaaggtgtccaaccagctgagatccagt
atcaccaacgtgaccaaacagagaggagacaagaatgccatccacaaccacattcgtctg
tttgaacctctagtgatcaaggctctgaaactgtacaccacctccacctctgtggcgctg
cagagacaggtcctagacctgctggcgcagctggtacagctacgagtcaactactgtctg
ctggactcagaccaggtgttcataggttttgtattgaagcagtttgagtacattgaggtg
ggacagttcagagattcggaggcgatcgtccccaacatattcttcttcctggttctgttg
tcgtacgagcggtaccactccaaacagatcatcagcatcccgaagatcattcaactgtgt
gatggcatcatggctagtgggaggaaggctgtcacccatgccatcccagccctgcagcct
atagtccatgacctgtttgttctgaggggctccaacaaggctgacgctgggaaggagctg
gacacccagaaagaggtggtggtctccatgctgctgagactcatacagtaccaccaggtg
ctggagatgttcatcctggtcctccagcagtgtcacaaggagaacgaggacaagtggaag
agactgtccagacagatcgctgacatcatactgcccatgataggaaaacaacagatgcac
ctggactcccctgaggctctgggggtgttgaacactctgtttgagacggtcgctccctcc
tctctccgcccggttgatatgctgctgaagggaatgttcactacacctgctaccatggct
aatgtcaacacagttcagctgtgggtgtcaggtgtcttggctgtcctcagagttctcatc
tctcagtccactgaagacataattctctcacgtgtccacgagctctccctctctcctccc
tccctctccctctctcctccctccctctctcctctcctcctctcctgtcccaccatccga
catctccgcgacgacagcagcctctcgtcgccaccgcctctggcgcccccggcgactgtc
gcccccgacaaccaggaggccaacggagagcgggtgctgccggaggagacgtttgccagg
tttctactccagctcgtaggagtgatgttagatgacatctcgaccagacaggtgaaggtt
gacatgaccgaacagcaacacacgttctactgtcaacagctggggactctgcttatgtgt
ctcatacacatcttcaagagtggcatgttccgtaggatcacggcagcagccactcgtctc
ctgaagggtgaggctgttctgggtgcaggtccaggtgtcttctaccccctagagggtctt
aatgccatggtgggctgcctggtgaccacacacccctctctggttctactctggtgccaa
gtcctcctcatcatcaactacaccaactacagctggtggacagaggtccaccagacaccc
aggagacagagtctgtcctgtaccaagctgctgagccctcattcatcaggaggggtggag
gaggagagaccagaggccaggctggccatgtgtaacagagagatcgtacgcaggggagga
ctcattctcttctgtgactacgtgtgtcagaacctgcacgactcggagcacctgacctgg
ctgatcgtcaaccacgtccgtgacctcatcgacctttcccatgagcctccggtgcaggac
ttcatcagtgcagtgcaccgcaactcggccgcctccggactgttcatacaggctatacag
tcacgctgtgaccacctctctactcccaccatgttgaagaagactctccagtgtctagaa
gggatccacctgtcccagtctggttctctgttgatgctctacgtggacaaactactgaac
actccattcagagtcctggctcgtatggttgatactctggcctgcaggagggtggaaatg
ctgctcgctgaaacactacagaactgtttagtccagctgccggtggaggaactggacaga
atccaggaataccttcagatcagtggactagctcaacggcaccagaggttctactccctg
ctggacaggttccgagccaccgttgccgaggacaccagcagcccctcccctcctgtgaca
tcacaccccctggatggggaaccgccacctgcccctgaactagtcaaggctgacaaggag
tggtatgttgccttggtgatgtcccagtgttgtctccgtggtgacgggtcgttcctggag
acaacggaactcctgaccaaactacctcctgacgacctctctaccatcatgacctgcaag
gacttcaacctgtctctcctctgtccgtgtctgagtctgggggttcagaggttaacccgg
ggtcaggggtcgttgctattggagacggccctggccgtgaccctggatcatctgagcgtg
gtcacacagctacttcctgttccacaccgttccttcctgctgccggccaaacctgacccg
gccgagccctactgggacaaactggctgtcgtctatggtgagcctggactctacccgcgg
gtgatgtctctgtgtagagcgctgtctcagtatctgctgtgcgtgggtcagcttccttcc
cctctgcaaatccctgaagacaaacaacatctcatcaccaccttcaccaccatggctacc
gagttggtggtctggcgtgttctccaggaccgtgttcctctgagtgttgacctgcagggg
gctctgtcctgtctgtgtctggccctgcaacaaccctgtgtctggaacacactgtctaca
gccccgtacaaaacacacacctgctccgtcatacactgtctacgactcctcatcactgca
gtggcagtaggtcccggtgaccatctgttacatccagggaggaagagaaccaccgggtca
gatggtgattcagaccaggtccactctccaaacactgacaacgtgtgtgagcgacggtca
tgtgagatcatggctgagctggtggaaggtctccagagcgttctgtctctgggtcaccat
agaaacagcggaatcccagccttcctcacgccgatgctccgaaacatcatcatcagtctg
tccagactaccgctggtcaacagttacactagagtcccccccctggtgtggaagctgggc
tggtcccctcggccggggggggagttcggcaccacccttcctgagatccctgtggagttc
ctgcaggagaaggacgtgttcagggagtttctctatcgcatcaacacactgggctggagc
agtaggacccagtttgaagagacctgggccacactgctgggagttctggtcactcaaccc
atctctatggaccaggaggaggagagggaacaggaggaggacttggagcgtacccagttg
aatgtgttagcggtccaggccatcacgtccctggttctgagctccatgactctccctact
gccggaaaccctactgtctcctgtctggaacaacagccgagaaacaagacccttaaagtc
ctggacacacggtttggcaggaagttgtcagtgatcagaggagccgtggagagagagatc
caggccatggtgtcgaagagagacaacgtacacacacaccacccctaccacacctgggat
cctgtcccctccctgtctgctgtctcaccaggtacactgatcagccatgagaaactcctg
ctgcagatcaacacagagagagagatgggaaacatggactacaaactgggacaggtgtcc
atccattctgtgtggctggggaacaacattacccctctgagagaggaagagtggggtgag
gatgaggaagatgagactgatactccggcccccgcctctcttcctacctctcctatcaac
tccaggaagcatcgtgcaggtgtagacatccactcctgttctcagttcctattggagctc
tacagccagtggctcctccccggttcccctagcaacagacgcacccctgttgtgctcatc
agcgaggtggtccgatcgttgttggcggtctctgacctgttcacggagcgtaaccagttt
gacatgatgttcaccaccctgatggagctgcagaagagccatcctgctgaagatgagata
atgaaccagtacctggtaccagctctctgcaaggctgccgctgtcctgggcatggacaag
gcgacctctgaacctgtgtgtcgggtgttggagctgaccctgcacagcacccacctcccc
agccggatgggagcgctgcacggcctgctgtatgtactggagtgtgacctgctggacgac
accgtgaaacagctggtacctgccgtctccgactacatcctgagtaacctacgggccgta
gcacactgtgtgaacctgcacaaccagcagcatgtcttggtgatgtgtgctgtggccttt
tacatgatggagaactaccctctggatgtaggagccgagtttactgctggggttatacag
atgtgtggtgtgatggtatcagccagtgaagactccaccccctcagtgatctaccactgt
gtgttgcgtgggttggagcgcctcctgctgtcggagcagctgtctcgtatggacggagag
gcactggttaaactgagtgtcgacagggttaacatgccaagccctcacagagccatgtct
gcactgggactcatgctcacctgcatgtacacaggcaaggagaaggccagccctggtcgc
ccggccggcgctgtcgaccctcaggcccccgacagcgagtctgtcatcgttgccatggag
agggtctccgtgctcttcgacagggtccgtaagggtttacccagcgaggcgcgggtggtg
gccaggattcttcctcagttcctggacgacttcttccctccgcaggacgtcatgaacaag
gtcatcggagagttcctgtccaatcagcagccgtacccacagttcatggctactgtggtc
tacaaggtgttccagaccctccatgctacaggccagtccagtatggtgacagactgggtg
ttactgtctctgtcgaacttcacccagagaaccccagttgccatggccacgtggagtctg
tcttgcttcttcatctctgcctccacctcccagtgggtctctgccctcctgccccatgtc
accagccgaatggggaagagtgaggtggtggacatcagcttgttctgtctggtagccctg
gacttctacagacaccagctggacgaggagttggaccgcagagccttccagtcggtcttc
cagaccgtggcctcgcctggcaacacctatcagcaactactggactgtctgcagagtatc
caccaagacacatcgctctga
DBGET
integrated database retrieval system
