Oncorhynchus masou masou (cherry salmon): 135507197
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Entry
135507197 CDS
T10723
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135507197
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135507197
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135507197
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135507197
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135507197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
135507197
NCBI-ProteinID:
XP_064782861
LinkDB
All DBs
Position
20:24758005..24854247
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AA seq
1419 aa
AA seq
DB search
MRRTGVGVCGGAVFSCSVTLTGPGELFHLLVLLLLTMTQLPVTDSALRYRVAEEGPTDVM
IGNVAADLGLSAGTGSGDVTFALESGSEFFKIDNVTGELTTGQRRIDREKLSQCQMIFDE
NECFLDFEVSVIGPLQSWVDLFEGRVVITDINDNTPSFPSSVLTLSVEENRPIGTLYLLP
TATDRDFGRNGIDRYELIQDGSSSGSAGSGLGSARRAAGGPMGRADGTGGGGDRRRGALD
NNGGAAGGGAGGGVRSSVFELQVADTPDGEKQPQLIVKGPLDREARDSYELVLRVRDGGN
PPRSSQALLRVAITDVNDNSPRFERAIYEAEMAENAPPGTPVLQVRASDRDVGVNGQVEY
VFGAATESVRRLLRLDEATGWLSVLHRIDREEVAQLRFTVTARDRGQPPRTDRATVVLVV
RDENDNVPVVEIRKIGRILVRDGVALVPENVLVDTPVALVQVSDRDQGENGAVTCTVVGD
VPFTLKPAGETALLPLPADDAFDRNRKKYFLHTSALLDYEATKEYSVTIVAVDSGSPSLS
SNSSLMVRVVDINDHTPAFAQAVVEVHFAENNQPGERVVTVVAADADSGKNAEIVYSLDP
SVNGLFYIDADNGDIRATGVLDREVRERYEFQVIARDKGFPSLQGSATVVIMVTDRNDNT
PKFVQEVFTFYVKENLLANSPVGMVTVTDADEGENAELSLFVEMEEEEGDEVEGGRGEKH
KGVGEEGGGRGGRGEDTFSIENNTGTIFSSVAFDRERRSTYTFRVRAIDGGAPPRSATAT
VSLIVTDENDNAPSVTSPTNESYTLLPPASSTRTIVRTVAASDSDFGRNADLRFSLVGGN
PFRLFEIGLASGVITVAEPLERRHRGLHRLVVRVNDSGEPSLCATALVHVFINESLVNAT
LVDAQVARSLAAPLYLDIAGDPDSERALGKQRLSVAIGVLAGAAAVILVILLVVMARQCG
AQGKNGYEAGKKEPEEDFFSPQPAVPQTRGGTLDRGRKPRRDKRNGGAGGAGANKTERPL
YSGVVTVNGLRRHGNDHHVANIDDDDEDVSSASERLAARYCAVDGDPGSPRMGARHHQSS
PDLARHYKSSSPLPAVHLQPYSPPAEGKKHQAVQELPPSNTFVGSGGSSGSGGSGNADAM
SLGSDQCSEYGSQTGNKYSKQATLRRVTFSVVPGPQDGGCYDSSAEDSETPSSKGSSGPR
VGALSLPEEGYERTTPEGSVGEEEHVENDARQLPDVALTGKCTRECDEFGHSDTCWMPAA
VRPSPRQHQRQRHVSEPPRLSTFASPGNDNNNNHDDDDEEDSDSESAGSAGSSEPGVVSV
GVGGGGQRLPLANGDPLGSLVGRDRMNRNMGDHNRNLLNRKMTSASYDTFSSAGFGRRHH
EEDRGGQGRINPPEVIPLTRTGDYKTTSCLTLSRREVYL
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggacaggggtaggtgtctgtggtggagcagtgttctcctgctcggtaactcta
actggaccgggggagttgttccacctcctagtgcttctcctactaacgatgactcagctc
ccggtcactgactcggctctccgttaccgggtggctgaggagggccccactgacgttatg
atcggtaatgtggctgccgacctcggcctgtccgcgggcaccggctccggagatgtcaca
tttgccctagagagcggctcggagttcttcaagattgataacgttaccggggagctgact
accgggcagcggaggattgaccgggagaagctgtcccagtgtcagatgatcttcgatgag
aacgagtgtttcctggacttcgaagtgtctgtgattggtccgctccagagttgggtggat
ctctttgagggccgtgtggtcatcaccgacatcaacgacaacactccttcgtttccgtcg
tcggtactgacattatctgtcgaggagaaccgtccaataggcacgctgtatctgttaccc
acggcgacggatcgcgactttgggcgcaatgggattgatcgttatgagctgattcaagat
ggcagctcttccgggtcggcggggtcagggttggggtcagcgaggagagcagccggtggg
cctatgggaagagcggatggaacaggaggaggaggggataggaggagaggagcattggat
aacaacggaggagctgcaggaggaggtgcaggaggaggtgtgaggagcagtgtgtttgag
ctccaggtcgccgacacgcccgacggtgagaagcaaccacagctgatcgtgaaaggccct
ctggaccgtgaagcacgcgactcgtatgagctggttctacgggtccgggacggtggcaac
cctcctcgctcttcccaggcgctcctccgtgtcgccatcaccgatgtcaacgacaacagc
ccgcgcttcgagagagccatctatgaggccgagatggcggagaatgcgcctcccggaacc
cccgtcctccaggtgcgcgcttcggaccgtgacgtcggcgtcaacggacaggtggagtac
gtcttcggcgctgccacggaatctgtccgccgtcttctccgactggacgaggctaccggt
tggctgagcgtcctccacaggattgaccgggaggaagtggcccagttacggttcacggtt
acggcaagggatcgtggtcagccgccgcgcaccgaccgggcgaccgtagtcctggtggtc
cgggatgagaacgacaacgttccggtcgtggagatcaggaagatcggacggattctggtg
agggacggagtggcactggtaccggagaatgttctggtggacacaccggtggcgctggtt
caggtgtcagaccgtgaccagggggagaacggggcggtaacgtgcacggtggtcggggat
gtaccgttcaccctgaaaccagcgggagagacggcgctcctgccactgcccgcggatgac
gccttcgacagaaaccgtaagaagtatttcctccacacttcggccctgttggattacgag
gccactaaagagtacagcgtgaccatcgtggcagtcgactccggttccccgtctctctcc
agcaacagctctctcatggtcagggtagtcgacatcaacgaccacactcctgccttcgcc
caggccgtggtggaggtccactttgccgagaacaaccaaccaggagagcgtgtggtcacc
gtggttgcggcggatgccgactccggcaagaatgcagagattgtgtattccttggatccg
tccgttaacggcctgttctatattgatgctgacaatggggatatccgtgcgacgggggtt
ctggaccgggaggtcagggagaggtacgagttccaggtgatcgccagggataagggattc
ccctcgctgcaggggtcggccacggtggtaatcatggtgaccgaccgcaacgacaatact
ccgaagttcgtccaggaagtgttcacgttctacgtaaaggagaacctccttgccaacagc
ccagtcggcatggtaacagtaacagacgcggatgagggtgagaacgcggagctgagtctt
ttcgtagagatggaggaagaagaaggagatgaggttgagggaggtcgaggggagaagcac
aagggagtaggagaggagggaggaggaagaggagggagaggtgaagacacgttctccata
gagaacaacacagggacgatcttctcctccgtggcatttgaccgggaacgccgttccacc
tacaccttccgcgtccgggccatcgacggcggggctcctcctcgctccgccacggcgaca
gtctccctcatcgtaactgatgagaacgacaacgccccctccgtgacctcacccaccaac
gaatcctacaccctcctccccccggcctcctccacccggaccatcgtcagaaccgtggcc
gcctcggactcggactttggccgcaacgctgacctgcgcttctccctggtaggagggaac
cccttcaggctgtttgagatcggcctggccagtggagtgatcactgtggcagagccccta
gagaggagacacagggggctgcatcgcctggtggtcagggtcaatgacagtggagagccg
tcgctctgcgccaccgcgctggtccacgtcttcatcaacgagagtctggtcaacgctaca
ctggtggacgcacaggtggctcgtagtctggccgcccctctctacctggacatcgcaggc
gaccccgacagtgagcgagcgttggggaaacagcgcctctcggtggccatcggtgtccta
gcgggcgccgcggcagtcatcctggtcatcctcctagtggtgatggcccgccagtgcggc
gcccagggcaagaacggatacgaggccgggaagaaagaaccggaggaggatttctttagc
cctcaaccggccgtgccacaaaccaggggagggacgttggaccgcggacggaagccccgc
agggacaaacggaacggaggcgccggaggagccggagccaataaaactgaacggccgctc
tacagcggcgtcgtcacggtcaacgggctccggcgccacggcaacgaccaccacgtcgcc
aacatcgacgatgacgacgaggacgtgagcagcgccagcgagaggttggcggctaggtac
tgcgcggtggacggagaccccgggagcccacgcatgggcgccaggcatcaccagtcgagc
ccggatctggccaggcattataagtcaagctcgccgctccccgcggtgcacctccagccc
tacagccccccagccgaggggaaaaagcaccaggctgtacaggagctacccccctctaac
accttcgtggggtctggagggtccagtggtagtggtggaagtgggaacgctgatgccatg
tctctggggtcagaccagtgttctgagtatggatcccaaacggggaataagtacagcaaa
caggcgaccctgcggagggtgacgttctccgtggtcccgggtcctcaggacggtggttgc
tatgacagctctgcagaggactctgagacccccagcagtaagggttcatctggaccccga
gtgggggcgctgtctctccccgaggaggggtacgagaggaccacacctgagggaagtgta
ggagaggaggaacatgtggaaaacgatgccagacagctcccagacgtagccctgacaggg
aagtgcacgagggagtgtgatgagtttggacactccgacacttgttggatgcccgccgct
gtccgcccgtcgcctcggcaacaccagcgccagcgccacgtcagcgagccgccccgcctg
tccaccttcgcctcccctggcaatgacaacaacaataaccatgacgacgatgatgaggaa
gatagtgacagcgagagcgccggcagcgccgggagttccgaaccgggcgtagtcagcgtg
ggagtcggcggaggaggtcagaggttaccgttagccaatggggatcctctcggcagcctg
gtgggcagagacaggatgaaccggaacatgggcgaccacaaccggaacctactcaaccgg
aagatgacgtcagcgtcgtacgacacgttcagctccgccgggttcgggagacgccatcac
gaggaggatagggggggtcagggcaggatcaaccctccggaggttataccattaacgagg
accggggactacaagaccacgtcgtgcctcacgctctcccgtagagaggtctacctgtaa
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