Oncorhynchus masou masou (cherry salmon): 135507198
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Entry
135507198 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135507198
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135507198
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135507198
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
135507198
NCBI-ProteinID:
XP_064782862
LinkDB
All DBs
Position
20:complement(25171491..25221742)
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AA seq
723 aa
AA seq
DB search
MPIAATGQLTTQEPCIFSRLPSTPEPVPKGGNLCDVAGAVADSQERTEYGGAEGGRGGLV
ASYSQTSGARGFLPLRSSNSNGSPPQSPPTSSPLASSFFHHHPYQMAMEPPRTRSRSRSG
FYQQYGATGPGINANGGNGPNHHHHHSQQQHHQQQHNSGCSPLGAHSHHTEQHSIRAPGS
NVSPGAQRQSGPPGAHRISPAGAVGGRSHPDHACGEEGDKNEDSPSPKRQRLSGQSVLDL
STVAPPTNPSPPMRPWELPHSRRPPPNPHPHYHQERCHTPVRHRHSPPARRQRGRLSRTP
RHLPPPPPHHPSPPPPSIRLDPQDQSFRHHYPHPHQSYSHPPPPPYGQPPAPAGGGVEEP
RAFHPPALSPRLLHPAVHHSHQAAHHRTQQQGAMVMDLHEQASVPVSYTVTPVPSHHGLV
APLYTGQHLPPVCSSQQQIPACSVVFSTGQHYHPMLGACSVQHLPVPYSFPSLLSNDPPF
LLPPPHLSHHPPHLPPPGHFLPFPTQQSRSPLQRIENEVELLGEHLSVGGGFNYPHGGHH
PSSLPPSTPLQFLSHHDSLSQELFGVPYPHFMPRRITGRRYRSQQTVPPPPYHPGFLPYF
LSMLPVGPTVGPTISLELDVDDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFN
PNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVHR
DSE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccacgggtcaactgacgactcaggaaccctgtattttctcccgactg
ccctccaccccggagcctgtaccaaaagggggtaatttatgtgacgttgcgggggcagta
gccgactcgcaggagcgaacagaatacgggggcgccgaggggggcaggggaggactagta
gccagctacagtcagaccagcggcgctcggggatttctgccgcttcgttcttccaactcc
aacggttctcctccgcaatcccctcccacgtcctcccccctcgcctcatctttcttccat
caccacccctatcaaatggccatggagccgcccaggactcgatcgcgttctcggtctgga
ttctaccagcagtatggtgcgaccggccccgggattaatgccaacgggggaaacggacct
aaccaccatcatcaccacagccagcagcaacatcatcaacagcagcacaactctggttgc
tcaccccttggagctcacagccaccacacggagcagcacagcatacgagccccgggatct
aacgtctcccccggggctcagaggcagtcgggaccgcctggagcacatcgcatctcaccc
gcaggagccgtaggggggaggagtcatcctgaccatgcctgtggagaggagggtgacaag
aatgaggacagtcccagtccaaagcgtcagcgactatctggccaatccgtgctggatctc
tccacggtggccccacccaccaacccctctccaccaatgaggccatgggagctgccccac
agtcgcagacctccccctaacccccacccccattaccaccaggagcgctgccatacacct
gtcagacacagacacagtcctccagcgcgtcgccagcgtggccgtctctcccgcaccccc
cgtcacctccctcctcctcctccccaccacccctcccctcctcccccctccatccgactg
gacccccaggaccaaagcttccgccaccactaccctcacccccaccagagctactctcac
ccccctcctcccccctacggccagcccccagcccctgccggtgggggcgtggaggagcct
cgagcgttccacccacctgccctgtctccacggttactgcaccccgctgtccatcattct
catcaagcagctcaccaccgcacacagcagcaaggagccatggtcatggaccttcatgaa
caggcctcagtccccgtctcctatacggtgactcctgtcccttctcatcatggtctggta
gctcctctgtatacaggacagcacctccctcctgtctgttcctctcaacaacagatccca
gcatgcagtgtggtcttcagtacaggacaacactaccaccctatgctgggggcgtgttcg
gtgcagcatttacctgtgccctactcctttccctccctcctctccaatgatcctcctttc
ctcctcccccctccccacctctctcaccacccccctcacctccctccacccggacacttc
cttcccttcccgacacaacagtccagatcgccgttgcagaggatagagaacgaggtggag
ctgcttggagagcacctgtctgtgggaggggggttcaactaccctcatggaggacaccac
ccctcctccctgcccccctccacacccctccagttcctgtctcatcacgactccctgtca
caggagctgttcggagtgccgtacccccacttcatgcctcggcgaatcacagggcgtcgt
taccgctcccagcagaccgtgcccccgcccccctaccacccaggcttcctgccttacttc
ctgtcgatgcttccagtgggtcctacagtcggtcctaccatcagtctagagttagatgtg
gatgatggagaggtagagaactatgaagccctgttgaacctagcagagcgtctgggcgag
gccaaacccagaggactgaccaaggctgacatagaacagcttccctcctaccgcttcaac
cccaacaaccaccaatcagaacagacactgtgcgtggtgtgtatgtgtgactttgagtct
cgtcagctgctaagagtcctgccctgtaaccatgagttccacaccaagtgtgttgacaag
tggctcaaggctaacagaacgtgtcccatctgtcgggcggacgcctccgaggtccatcgg
gattctgaatga
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