Oncorhynchus masou masou (cherry salmon): 135507791
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Entry
135507791 CDS
T10723
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135507791
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135507791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Sde0182_C
TMEM154
Motif
Other DBs
NCBI-GeneID:
135507791
NCBI-ProteinID:
XP_064783526
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All DBs
Position
3:complement(16229713..16233526)
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AA seq
1006 aa
AA seq
DB search
MGMRGWNWWVLVGIPLAVLPTLTQGKTVKYETFEEDAPATIIGNLAKDISSSPSSGSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLVAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGVNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGSTRINIKVKDYNDNSPL
FDRSSFTVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGHQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFNVQAADLGLNPSPAICKIVVRVQDVNDNAPEISITPMTSITAG
IAYITEAASRDSFVALVSTSDMDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EKIPEYNLTVVAEDLGSPPFRTITQYTIRLMDENDNAPVFSKSAYEVAVVENNTPGAYIT
TVVARDMDLGHNGKVIYKLADTYIMGSPVSTFVSLDPASGSIYALRSFNYEVMKQLELCI
TASDGGSPPLTGTASIHVRIVDQNDNAPVINQPALNNGSSEILLPRDAPSGYVITRVEAR
DADEGVNAELSYRLASGEGSVFSVNKATGEVYLNRELSHDVDETLHMTVTVSDNGRPALT
ATATLHFLIIVGAPPNDRPVYWAGSGEAGEHAQWDLSVVIIVVLAGSCTLLLLAIILIAT
TCNRRKRDKTGDDTDSYGEKETLERGKNISDNPLLPLHGTMGGFEAHTFSSQPGFTGGHT
GSSDLCSTSEDGREAPCVYEPDSKPKGYSTLPGYGNSYNNGKEAVRPITIWKGNSYTTIS
ARDPAFSGKDSGKGDSDFNDSDSDISGTDLKKEGVPVHPMGCHSGLWACTSECKVLGHSD
RCWSPSAVRAHIGPSLVPTPTSQTVSSFNSFSKTASLPRDSLRRDNYYQAHIPKTTGLQS
VYEKVLHKEYDYVLVTPPRPLRVQEISDITIPVYSPTTTRCPSNEV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagagggtggaactggtgggtgctagtgggcatcccactggctgtcctgccc
actctcacgcagggaaagacagtgaagtacgagacatttgaggaagacgccccggcaact
atcattggaaacttggccaaggacatttcatccagcccctcctccggctccaagacaaat
ttcaggatgatgaaacagttcaactcgtcttttatccgtttgagggagagcgacggacag
ctgactatcggagagagaattgacagagagagaatctgtaaacacacccttcactgcctc
gtcgcctttgatgtggtaagcttctccaaagagcagttcaaactcatccacgtcgaggta
gaggtcaaggacatcaacgacaattcccccgagtttccacggaaagagtcgagtctggag
atctccgaaaacacagcggtgggcacgcggatcccgttagacttcgctgtggatgaagat
gtgggggtgaattacatccagagctaccagatctccgttaacagtcacttcaccatagac
gtgctcagcagagccgacggggttaaatatgcggagctcgtgctcatgaaagagctggac
cgtgagacacaggcttcctatgcgctcgagctggttgctatggacggcggcaacccgtcc
cgcacgggatccacgcgcatcaacatcaaggtgaaagactacaatgacaacagccccttg
ttcgacaggagcagttttacagtggacctccctgaggatgcaccagtagggtttctctta
ctggacctgaacgcagaagacccggatgaggggctgaatggggaggtggtgtatggtttt
ggtcaccaggtgccatccgagataagacaacttttcagagtagaccgcaaaacgggaagg
ctcaccctcgagagccccattgactttgagagcaagaaaacgtacgaattcaatgtccag
gcggctgacctgggtctgaacccaagcccggccatctgtaagatagtggtgcgggtccag
gacgttaacgacaacgcgccagagatctccatcactcctatgacgtccatcacggcggga
atcgcctatatcacggaggctgcatcgcgcgacagttttgtagcgctggtcagcacctct
gacatggactcgggagctaacggacaggtgcactgtacgctctatggccacgaccacttc
aggctgcagcaggcgtacgaggacagcttcatgatagtgagtacaagcccgttggaccgg
gagaagatccctgagtataatctaacagtggtggcagaggacttgggctccccaccgttc
agaaccatcacccagtacaccatccggttgatggatgagaatgacaatgcccctgtgttc
agtaaatcggcgtatgaagtggctgtggtggagaataacaccccgggggcctacatcacc
acggtggtcgccagggacatggacttgggacacaacgggaaggtgatctacaagctcgct
gacacctacattatgggctccccggtgtctacgtttgtctcactggaccccgcgagcggc
tccatttacgcactcaggagcttcaactatgaagtcatgaaacagctcgaactgtgcatc
acagccagcgacggtgggtccccgcccctcaccggaaccgcaagcattcatgtcaggata
gtggaccagaatgacaacgcacctgtcatcaaccagcccgcactaaataatgggtcctct
gagattctgctgccccgggacgcaccctcaggctacgtcatcacccgggtggaggcgcga
gatgctgatgagggcgtgaacgcagagttgtcctatagactggcatctggagagggttcc
gtgttctccgttaacaaggccaccggagaggtctacctcaaccgcgagctcagccacgac
gtggacgagaccctgcacatgaccgtcacggtgagtgacaatgggagacctgcgctcacc
gccaccgctacgcttcatttcctcatcattgtgggcgccccgccaaatgacaggccggtg
tactgggcaggcagcggggaggcgggggagcacgcacagtgggacctgtcagtggtgatt
attgtcgttctggcggggagctgcacgctcctgctgttagccatcatcctcatcgccacc
acctgcaaccgccggaaacgggacaagactggagatgacacagactcgtatggggagaag
gagactctggaaaggggcaagaacatcagcgacaatccactcctgcctctccatggaacc
atgggagggtttgaagctcacaccttctctagccagcccgggtttactgggggacacact
ggcagcagcgacctgtgctccacctctgaggatgggagagaggcaccatgcgtctacgaa
ccggacagcaaacccaagggctactccactctgcccggctacggtaacagctacaataat
ggtaaagaggcagtcagaccaatcacaatctggaagggcaactcctacaccactatctct
gcgagagaccccgcgttcagcgggaaggacagcgggaaaggcgacagtgactttaacgac
agtgacagtgacatcagtggcaccgacctgaagaaggagggggtaccggtacaccccatg
ggctgtcacagtggtctatgggcatgtaccagtgagtgtaaggttctgggccactctgac
cgctgctggagcccctcggctgtccgtgctcacattggtccctcactcgttcccaccccc
accagccagactgtctcctccttcaacagcttttccaagactgcctcgctgccccgggac
tcgctccggagggataactattaccaggcacacatccccaaaacaacgggcctgcagagc
gtgtatgagaaggtactacataaggaatatgactatgtcctggtcactcctcccagaccc
ttgagagttcaggagattagtgacatcactatcccagtctatagtcccaccacgacacgg
tgtcccagcaatgaagtctaa
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