Oncorhynchus masou masou (cherry salmon): 135507851
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Entry
135507851 CDS
T10723
Symbol
nrxn3a
Name
(RefSeq) neurexin 3a isoform X1
KO
K07377
neurexin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135507851 (nrxn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135507851 (nrxn3a)
Membrane trafficking [BR:
omm04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
135507851 (nrxn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Protocadherin
Motif
Other DBs
NCBI-GeneID:
135507851
NCBI-ProteinID:
XP_064783625
LinkDB
All DBs
Position
21:15864682..16335646
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AA seq
1713 aa
AA seq
DB search
MDVLGLSARLQLLLSAFLGVCLSLEFTAAPGQWARYLRWDASTRSDLSFQFKTDMSTALL
LYFDDSGYCDFLQLMVVEGKLQLRFSIDCAETAVVSDKRVNDSSWHFATLSRYGLRTVLG
LDGQVKADEVRPTGGSRQHMKIVSDLFLGGVPLDIRTSALTLPTARDAPPFRGTISDLKY
GNTEPVLLSSLRVRLESEGRCTENPCENSGSCTVVDGEPMCDCSKTEYKGRFCNEEVNNN
IPGFSHMMMAEQAKSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLI
LHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNTWHDVKVTRNLRQQSG
IGHAMVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNF
MGCLKEVVYKNNDIRLELSRLARIVDPKMKIQGDVVFKCENVATLDPISFETPEAYISLP
KWNTKRMGSISFDFRTSEPNGLILFTHGKPQERKEAQRSQKNTKVDFFAVELLDGSLYLL
LDMGSGTIKVKATQNKVNDGAWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDM
YLGGLPSDRANLILPTELWTAMLNYGYVGCVRDLFIDGRSKDIRQIAEAQNGAGIKPSCN
KVVGKQCESYPCKNRGVCKEGWNRFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPQ
VMHTEAEDVSLRFMSQRAYGLLMATTSRDSADTLRLELDGGRVKLTVNLDCIRINCTSSK
GPETLYAGQKLNDNEWHTVRVVRRGKTYKLTVDDDVAEGQMAGDHTRLEFHNIETGIMTE
RRFVSAIPSSFIGHLQSLRFNGMLYIDLCKNGDIDFCELNARFGMRSIIADPVTFKSKSS
YLSLATLQAYTSMHLFFQFKTTSPDGFIMFNSGDGNDFIAVELVKGYIHYVFDLGNGPNV
IKGNSDRALHDNQWHNVVITRDNSNIHTLKVDAKATSQVVNGAKNLDLKGDLFIAGLGPG
MYGSLPKLVASRDGFQGCLASVDLNGRLPDLLQDALFRSGQIERGCEVGFTKADLQGPST
TCQEDSCANMGVCIQQWENYTCDCSMTSYTGTQCNDPGMTYIFGKGGGLITFNWPANERP
STRTDRLTIGFSTSLKDGILVRIDSAPGLGDYLMLHIEQGKIGVTFNIGTMDISVRESST
PVNDGKYHVVRFTRNGGNATLQVDNWSINEHFPGATTDNERLEIATKKFPLKYARPVVDW
LQEKGRQLTIFNTQATVTIGGSDRSRPFQGQLSGLYYNGLKVLNMAAEGNPNIKINGSVR
LVGDVPSVAGSARTTAQPPEMSTTFIETTTTMSTTTTRKHRSSPTIQQTTDDIVSSAECS
SDDEDLEECDSGHAGGELVIPILLEEPLVLPPVATRAPSIPLPPTLRPPLTIIETTKESL
STATEAGVPCLSDRGSDDCDDDDDDGLVISGYGSGEAFNSNLPPTDDEDFYTTFSLVTDK
TLSTSAFEGGYKVHAPKWETKDFSSNKPSSERGRTTTTAALPLAPDQSRYTSTATLHHTP
PAKLPAGKMNNRELKPQPDVVLLPLPTLPYEVDSTKQRAPVITSPMFRNVPTALPTQPGV
NRVPGPPEVSRQSSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDESRNYITN
SATQSNGAVMKDKQQSAKGSKVKQKNKDKEYYV
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctgggcttgtctgcgaggctgcagctgctgctctcggccttcctgggtgtg
tgtctgagcctggagttcacagcggcccccggccagtgggcccgctacctccgctgggac
gccagcacgcgtagcgacctcagcttccagttcaagacagacatgtccacggcactgctg
ctctacttcgacgacagtggctactgcgacttcctgcagctgatggtcgtggagggcaag
ttgcagctgcgcttcagcatcgactgcgccgagaccgctgtggtgtccgacaagcgggtc
aacgacagcagctggcactttgccacactgagccgctacggcctgaggacggtgctgggg
ctggacggccaggtcaaggcggacgaggtgcggcccaccggaggtagccgccagcacatg
aaaattgttagcgatctgttcctgggtggcgtgccgctggacatccgtacgtcagcgctc
acgctgcccacggcacgtgatgccccacccttcagaggaacaatctcagatctgaagtac
gggaacacggaaccggttctcctcagcagcttgagggttcgtctggagtcggaggggcgc
tgtaccgagaacccgtgcgagaacagtgggagctgcaccgtggtggatggggaacccatg
tgcgactgctccaaaacagaatacaagggccgcttctgcaatgaagaggtcaacaataat
attccaggattttcacatatgatgatggcggagcaagctaaaagcaaagcacgggaggag
aatgtggccacgttccgcggctccgagtacttctgctacgacctgtcccagaaccccatc
cagagcagcagcgacgagatcacgctctccttcaagacgtggcagcgtaacggcctgatc
ctccacacggggaagtcggctgactacgtcaacctggccctgaaggacggggcggtgagc
ctggtcatcaacctggggtcaggggccttcgaggccatcgtggagcctgtcaacgggaag
ttcaacgacaacacctggcacgacgtcaaggtcacgcgcaacctgagacagcaatcaggc
attggacacgctatggtaaacaaactccattgtctggtgacgatatcagttgacggtatc
ctgacgaccacggggtatacccaggaggactacaccatgctgggctcagatgacttcttc
tacgtgggtggaagccccagcaccgccgacctgcctgggtctcctgtcagcaacaacttc
atgggctgcctcaaagaggtggtctacaagaataacgatatccgtctggagctctcccgt
ctggcccgcatcgtagaccctaagatgaagatccagggggacgtagtcttcaagtgtgag
aacgtggccaccctggaccctatctccttcgagacccccgaggcctacatcagcctgccc
aagtggaacaccaagagaatgggctccatctcctttgacttcaggacctcggaacccaac
ggactcatcctgttcacccacggcaagccccaggaacgcaaggaggcccaacgcagccag
aagaacaccaaggtcgacttctttgcggtggagctcctggatggcagtctatacctactg
ttagacatgggctctgggaccatcaaggtcaaagccacccagaataaggtcaacgacggg
gcctggtaccacgtggacatacagagggatgggcgttcaggcaccatctcagtcaacagc
cggcgcaccccgtttacagccagcggtgagagtgagatccttgacctggaaggagacatg
tacctggggggtctaccctcggaccgtgccaacctcattctgcccaccgagctgtggacc
gccatgctcaactatggctacgtgggctgcgtgcgcgacctcttcatcgacgggcgcagt
aaggacatccgacagatcgctgaggctcaaaacggggcaggcatcaagccgtcgtgcaac
aaggtggtggggaaacagtgcgagagctacccgtgtaagaacagaggcgtctgtaaggag
ggatggaaccggtttatatgtgattgtaccggcacggggtactggtcacgcacctgcgag
agagaggcatccattttgagttatgacggcagtatgtacatgaaggtggtgatgccccag
gtgatgcacacagaggctgaggacgtgtctctacgtttcatgtcccagcgggcctacggc
ctgctcatggccaccacctcacgggactcggccgacacgctgcgtctagagctggacggg
ggccgggtcaagctcacggtcaacctagactgtatcaggataaactgtacttccagcaag
ggacccgagaccctgtatgctgggcaaaaactcaatgataatgagtggcatacggtgcgc
gtggtccgccggggaaaaacctacaagctcacggtggacgatgacgtagcagaaggccag
atggcgggtgaccacacccgtcttgagttccacaacatcgagacgggcatcatgacggag
agacgcttcgtctcggccatcccctctagcttcatcggacacctgcagagcctcaggttc
aacgggatgctgtacattgatctctgtaagaacggagacatcgacttctgcgagctaaac
gcccggtttggcatgcgctccatcatcgctgaccctgtgaccttcaagtccaagagcagc
tacctgagcctggccaccctgcaggcctacacctctatgcacctgttcttccagttcaaa
accacctccccggacggcttcataatgttcaacagtggagacggaaacgacttcatcgct
gtggagctcgtcaaagggtacatccactacgtgtttgatcttggcaatgggcctaacgtc
atcaagggtaacagcgaccgggctctccatgacaaccagtggcacaacgtggtcatcacc
cgtgacaacagcaacatccacacgctgaaggtggacgccaaggcaaccagccaggtggtc
aatggagccaaaaacctcgacctgaaaggtgacctgtttattgctggactgggccctggt
atgtacggtagcctgcccaagctggtggcgtcccgggatggcttccaaggctgcctggcc
tctgtggacctcaacggccgcctccctgacctcctccaggacgcgctgttccgcagcggg
cagatcgagcgaggatgcgaagttggtttcaccaaagctgacctacaaggtcctagcacc
acctgccaagaggactcatgtgccaacatgggtgtctgtatccagcagtgggagaactac
acctgcgactgctccatgacctcctacaccggcactcagtgcaatgatcctgggatgact
tatatctttgggaaaggaggaggcctcattacgttcaactggccagccaacgagaggcca
agcacgcgcacagacagactgaccatagggttcagtacttccctaaaggatggcatcttg
gtccggatagacagtgctccgggtctgggagactatctcatgctccacatcgaacaaggg
aagatcggtgtgacgtttaacatcggcacaatggacatcagtgtgagagagagcagcacc
cctgtgaatgacgggaagtaccatgtggtgcgtttcaccaggaatgggggcaacgccacc
ctccaggtggacaactggtccatcaacgaacacttcccaggagcgacaaccgataatgaa
cgccttgaaattgccactaagaaattcccattgaaatacgcccggccagtagtggactgg
ctacaagagaaaggtcggcagctaacgatattcaacacccaggccacagtcaccatcggt
ggcagcgaccgcagtcggcccttccagggtcagctgtccggcctatactacaacggcctc
aaggtcctcaacatggctgccgagggcaaccccaacatcaagatcaacggcagtgtccga
ttggtaggcgacgtgccctctgtagccgggtcggctcgcaccaccgcccagcccccggag
atgtccaccacctttattgagaccaccaccaccatgtccaccaccaccacccgcaagcac
cgctcctctcccaccatacagcagacaacggatgacatcgtgtcgtcggcagagtgttcg
agtgatgacgaggacctggaggagtgcgactctggccatgcaggaggtgaattagtgatc
ccaatactcttagaggaaccgttagtgctgccccctgtagctactcgtgcaccctccatc
ccccttcccccaaccctccgcccacccctcaccattattgagaccaccaaagagtccctg
tccacggccactgaggcgggggtaccttgcttgtcggatcgaggcagcgatgattgtgat
gatgatgatgatgatggcttggtgatatcggggtatggctcaggggaagcgttcaactct
aacctgccccctactgatgatgaagatttttacaccaccttctccttggtaacagataag
accttgtccacgtcggcctttgaaggtggctacaaagttcatgcgcccaagtgggaaacc
aaggactttagctctaacaaaccgtcctcagaacgcggtaggactaccactaccgctgcg
ctgccgctagcccccgaccagagccgctacacctccaccgcaaccctgcaccacacgcca
cccgccaagctgcctgccggcaaaatgaataaccgcgagctaaaaccccagcctgacgta
gtgttgctcccgttgcccacactaccctatgaggtagacagcaccaagcagagggctcct
gtaataacctcccccatgttccgtaatgtacccacagccctgcccacccagcccggcgtc
aaccgagtcccgggacccccggaagtgtcccgccagtctagcagcaccaccgggatggtc
gtcgggatagtggcggccgccgccctgtgcatcctcatcctcctgtacgccatgtataag
tacaggaacagggacgagggctcctaccaggtggatgagagcaggaattacatcaccaac
tcggccacgcagagcaatggagccgtcatgaaggacaaacagcagagcgcaaaaggcagc
aaagtaaaacagaaaaacaaggacaaggagtattacgtgtga
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