Oncorhynchus masou masou (cherry salmon): 135507890
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Entry
135507890 CDS
T10723
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135507890
Membrane trafficking [BR:
omm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135507890
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
135507890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
WD40_like
PEP5_VPS11_N
CFAP43_N
RAB3GAP2_N
WDR54
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
135507890
NCBI-ProteinID:
XP_064783710
LinkDB
All DBs
Position
21:17777810..17825983
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AA seq
1215 aa
AA seq
DB search
MKKFNIRKVLDGLAASSFSSASPQPGTSQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAVGTQSGAVRLFGRAGVECYCQHESGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIANVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYSYDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFVVMSGGLSYDTGCRRACLTVMHGKSTALLEMNYPIVDFLTLCETPYPNDFQDPYA
VVVLLEKDLVVIDLRQIGYPIFENPYSLSIHKSPVTCVEYFADCPPELIPALYSVGSWQK
RPGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
ALKEEKPSTEIVDEDPYAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQQLEV
RMQCELEDVDSPDTAGEHPLTPSTPVHSTCPTQEGEPPETQPSTTDDGTRDNVPCLKVRS
SPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNSNGLAVVDYLQKTLVL
NMGTSELYSPSDPYQRQPRSPRKKPQPSGDKDIPPVTSCMARLSIFYKSVKQTYRSSNAP
LSDNNNGNNALEEKSNKSPTSVGSTLPTNSDDERKQEMFIQKVKSKSRWFFKTVATDFAK
MSRKICSPTEQKTDLEKRVRRQRSLPYKKHFCCVKEGKEPRKSLSQQRTLSVPYLNAKDS
LFSGSRSSSVTSIELESREAISSFHFSESFPRKTDSSGSPSLWVGTTQGTVLVLALSLPP
TGDLRLQQPVRVSSCGTLVRLKGGILTMAFLDSLGVVLPPSYEPWSEPNPQDEEEKEKAR
RRRLASPPPTQEGQDSQYAVVCSEKQAKVVGLPSQSCFFKHNITESSFVLRADVVQMAAG
LCLTCFCANGHIMALSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQAMYLTSPTEIQRI
TYSQETCDNLQEMMGELFTPIETPEAPNRGFFKGLFGGGAQSLDREDLFGETAAGKASRS
LAQHIPGPQGMEGMKGAASGVVGDLARARIALDERGQKLGELEDRTAAMMASADSFSKHA
HDMMLKYKDKKWYQL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatattagaaaagtgctggacggcttggctgcttcttcattttcctct
gcatctccacaaccgggaactagtcaaaacgatgtgatccaagagacactacagtcggag
cattttcagctctgcaagactgtgcgccatggcttcccttaccaaccctcctccatggcc
tttgaccctgtgcagaagattctggctgtcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcaacatgagagtggtgcagctgtcattcagctc
cagttcctggtcaacgagggggcgctagtcagtgccttagctgatgacagcgttcatctg
tggaacctgaggcagaagcagccagctatcctgcacactctcaaattcaacagggagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacattggcacagagaaagga
aacatccacatcgccaacgttgagtccttcacactctcaggctacgttatcatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cctatggacgagggaaagattttgattggatttgaatgtgggactgttgtgttgtgggac
ctgaaatgcaaaaaagctgactaccgctacagttatgatgaggctatccactcggtagcc
tggcaccacgagggcaaacagttcacctgcagccactcagatggaactctgactacatgg
aacgtacgcgtccctgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgtaaacctatccttaaagtggagtacaaaacgacaaga
gctggggacgcgtttgtggtcatgtctggaggcctgtcctatgacacagggtgcaggaga
gcctgtctgacggtgatgcatgggaagagtactgccctcctggagatgaactatcccatc
gtagacttcctcacgctctgcgaaacaccatatccaaatgatttccaggatccttatgcc
gtagttgtccttttggaaaaggatttagttgtcatcgaccttagacaaattggataccca
atatttgagaacccgtactctttgtcgatccacaagtctccagtgacgtgcgtagaatat
tttgctgactgccctcctgaactcatacctgcactttactctgttggctcctggcaaaag
agaccgggttacagtaagaaggaatggcccataagtggtggtaactggggccaaggcaca
ctaagctaccctgagatcatcgtcactggacatgctgatggctcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctctaaaggaggagaagccgagcacggagatagtggatgaggatccctacgccatccag
accttgtcgtggtgcccagagagcaggatgctgtgtgtggctggagtctctgcccacgtc
atcatctataggttcagcaaacaggagataaccactgaggtggtgcagcagttggaggtg
cgtatgcagtgtgagctggaggatgtggattctccagacaccgcaggagagcatcctctc
accccatctaccccagtgcactccacctgcccaacccaggagggagaaccccctgagacc
cagccctccacaactgatgatgggacccgggataatgtaccatgcctcaaggtccggagc
tcccctctgaagcagtctcctggttaccaggtggagctggtcattcagctggtctgggtt
agtggggagccgcctcagcagatcaccagcctggctgtcaactcctcatacggacttgtg
gtgtttggcaacagcaatggtctggctgtagtggactaccttcagaagaccctcgtcctg
aacatgggcacgtcagagctgtacagtccctcagacccctaccagagacagcctcggtca
cctcgcaagaaaccacagccgtctggagacaaagacattccacctgtgacgtcttgcatg
gcccgcctttctatcttttataagtctgtgaaacagacttatcgttcttcgaacgcccct
ctcagtgataacaacaatggaaacaacgctttagaagagaaaagcaacaaatcaccaacg
tcagtaggctctacgttacccaccaattcagacgatgaacgcaaacaggaaatgttcata
cagaaggtgaagtccaaaagcaggtggtttttcaagacggttgccactgactttgccaag
atgtcaaggaaaatttgctcgcctacagagcaaaagacagacctggagaagagggtgcga
cgccagcgctctctcccgtataagaagcacttttgttgtgtgaaggagggcaaggagccc
aggaagtctctctcccaacaaaggactctctcagtcccttacctcaatgccaaggacagt
ttgttcagcggctcgaggagctccagtgtgacgagtatagagctggagtcccgcgaggcc
atctcctccttccacttcagtgagagtttccccaggaagacagacagcagtggcagtcct
agcctatgggtgggcactacccagggcactgttctggttctggccctaagcctgccaccc
acaggggacctgaggcttcagcaacctgtcagagtatcatcttgtggtactctggtcaga
cttaaaggaggtatccttaccatggctttccttgactcccttggtgtggtcctcccccct
tcctacgagccgtggtcggagcccaaccctcaggacgaggaggagaaggagaaggcgagg
cggcgcaggctggcctctccaccccccacccaggagggtcaggacagccagtatgctgtg
gtgtgttcagagaaacaggccaaagtggtgggcctaccctcccagtcctgcttcttcaaa
cacaacatcacagagagctcctttgtgctgagagctgacgtggtgcagatggctgctgga
ctctgcctcacctgcttctgtgctaatggacacatcatggctctgagtctacccagtctc
agaccactcctggatgtgaactaccttcccctgacagacatgaggatagcccggaccttc
tgcttctccaacctgggccaggccatgtacctcacctcccccaccgagatacagagaatc
acatacagccaggagacctgcgacaatctacaggaaatgatgggagagttgtttacaccg
atagagacacctgaggctcctaacagaggtttcttcaagggcctgtttgggggaggggct
cagtccctggatagagaagacctgtttggtgagacggcggcgggaaaggcgtctcgtagc
ctggcgcagcacattcctgggccccagggcatggagggcatgaagggggcagcctcggga
gtggtgggagacctggcccgtgcccggatagccctggacgagagggggcagaaactgggc
gagctggaggacagaaccgcagctatgatggccagcgctgactccttctctaaacacgct
catgatatgatgctgaagtacaaagataagaagtggtatcagctttga
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integrated database retrieval system
