Oncorhynchus masou masou (cherry salmon): 135508088
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Entry
135508088 CDS
T10723
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04082
Neuroactive ligand signaling
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135508088
04082 Neuroactive ligand signaling
135508088
04519 Cadherin signaling
135508088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135508088
Ion channels [BR:
omm04040
]
Ligand-gated channels
GABA-A
135508088
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
135508088
NCBI-ProteinID:
XP_064784100
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Position
21:complement(29958491..30018989)
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AA seq
486 aa
AA seq
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MWTALDRGRWEIFCLFLMVAMVCGAQSANEPSNMSFVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADSLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGDNSVTGVENIELPQFSIIDYHIQSTKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKTNNENKSRLESNK
VQVDAHGNILLTNLEIRNEMGGMGGMAGMTGAEMIGALNDPRATMFSYDSASIQYRKPMA
SRDLYGRPALDRPVGHKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVY
WMYYVH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtggacggctttggaccgcggacgctgggagattttttgtcttttcctaatggtcgcc
atggtctgcggcgctcaaagcgccaacgagcctagcaacatgtcatttgtgaaagcgacc
gtggacaaactgcttaaggggtatgacattcgtctgaggcctgattttggaggtgcccct
gtggacgttggaatgagcatagatatcgcaagtatcgacatggtttctgaagtcaacatg
gattacaccatcaccatgtacttccagcagtcctggagggacaagcgcttgtcctacaca
gggattcccctcaacctgacgctggacaacagggtggctgactcgctctgggtccctgac
acctacttcatcaacgataagaaatcctttgtgcacggagtcacagtgaagaacagaatg
atccgactgcatcctgacggaactgtgctctacggcctcaggatcaccactacggcagct
tgcatgatggatttgcgtagataccctctggacgaacagaactgcaccctggagatcgag
agctatgggtacaccactgatgacatcgagttctactggaaaggtgataattcagtgact
ggggtggagaacatcgaacttccccaattctctattatagactaccacatccaatccaca
aaagcagtgtttgctacaggctcctacccgaggctctctctgagttttaagctgaagagg
aacattggctacttcatcctacagacctacatgccctccaccctgatcaccatcctatcc
tgggtctccttctggatcaactatgacgcgtctgcggccagagtcgctttaggtataacc
actgtgctgaccatgaccaccatcaacacccacttgagagagactttacccaaaatcccc
tatgtcaaggctatagacatctacctgatgggctgcttcgtgtttgtcttcctggccctg
ctggagtacgcgtttgttaactacatcttcttcggtcgggggcctcacttacagaaaaag
gtggcagagaaagcagctaaaaccaataatgaaaacaagagccgtctggagagtaacaaa
gtgcaggtggacgcccatggcaacatcctcctgaccaatctggagatccgtaacgagatg
ggtgggatgggtggcatggccgggatgaccggggccgagatgataggggctctcaacgac
ccacgggccaccatgttctcctacgacagcgccagcatacagtaccgcaagcccatggcc
agccgagacctgtatggtcgaccggccctcgaccggcctgtcggccacaagaagagtcgt
ttgaggaggagggcgtcgcagctcaaagtcaagatcccagacctgacggatgtcaacgcc
atagacaagtggtcccgcgtcatcttccccatcgcctttaccttcttcaacctggtctac
tggatgtactacgtccactaa
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