Oncorhynchus masou masou (cherry salmon): 135508100
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Entry
135508100 CDS
T10723
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135508100
Membrane trafficking [BR:
omm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
135508100
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_9
LRR_EndoS
LRR_14
LRR_R13L1-DRL21
V-set
LRR_NXF1-5
LRR_Zer-1
LRRNT
LRRCT
Big_6
Ig_C17orf99
Big_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
135508100
NCBI-ProteinID:
XP_064784117
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All DBs
Position
21:30272754..30315025
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AA seq
611 aa
AA seq
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MRRSALYHCYPLLGGAVLLLLVSCVLGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRRLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGIGALKPYSFKRLPHLRHLEIDYWPWLEV
FPALSLHGLNLTTLTVTNTNLSSFPGPALRNLPYLTHLNLSFCRIQHIQQGVLDKLPRLQ
ELHLRGAQLAYIEPLAFLALPNLRMLDVSHNQLDSVEQAVFASPDSLHTLLMGGNPLVCD
CRLLWLLSGRKPPLLQLPDPQPECSAPERIRGKPLRDLKEPLVSRYVTCTKPRIGPNTTQ
LLLTEEGQPVWLNCIADGAPRPSMAWVTPHRRYVTAKSTGRVTVHTNGTLEIKAAELHDN
GVYLCVASNAAGNASMSASLAVKSLGISDRSLYTNKSGLLADSNGTWANGTLLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRKSNGTAAEANET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctctgccctgtaccactgctaccctcttctgggcggggctgtactgctcttg
ctggttagctgcgtcctgggttgccccgctcgctgcgactgctccgcccagaccaagtcg
gtcagctgccaccgcaaaagactgcctaccatccccgagggcatccccattgagactcgg
cttctggatctgagcaagaacaaactgcggagcattacaccggacaacttctcctccttt
ctacagcttgaggatctagacctcagcgataacctgataggcgtggtcgaaccgggctca
ttcaaatttcagctttccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cctgccggtgtgctctctggcctggccaacctcaccagtctggacctcagccacaaccgg
ttggtggtgctgctggaccacggcttccaggaccttcggaggctgatgtctctggaggtg
ggtgacaatgagctggtgttcatctcccagagggcctttactggcctgctgggcctgcag
agcctcaccctggagcgctgcaacctgactgttgtgcccactgatgccctggggcaccta
cacagcctggtggaactccgcctgcgccacctgggcattggtgccctgaagccctactcc
ttcaaaagacttccccaccttcgccacctggagattgactactggccctggctggaagtc
ttccccgctctgtcgctacacggtctcaacctcaccacactcaccgtcaccaacactaac
ctgtcctcttttcccggccctgctctacgcaacctgccctacctcacgcacctaaactta
tccttctgccgcatccagcacatccagcaaggggtgctagacaagcttccgcgactgcag
gagttgcacctgcgaggggctcagctggcttacattgaacccctggccttcctggcacta
ccaaacctgcgcatgttggatgtgtcgcacaaccagctggactctgtggagcaagctgtg
tttgcgtcccctgacagcctgcatacgctgcttatgggggggaaccctctggtgtgcgac
tgccggctcctatggctgctgagtggccggaagccacccttgctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcatccgtgggaaacccttgcgggacctcaaggag
ccgctggtgtcacggtatgtgacctgcaccaagccacggatcgggcccaacaccacccag
ctgctgctgacagaagaggggcagcctgtctggctcaactgcatagcagacggggctcca
cggccatccatggcctgggtgacgccacacagacgctatgtcacagccaaaagcaccggg
agggtgacagtccataccaacggcaccctggagattaaggctgcggagctgcacgacaat
ggtgtgtacctgtgtgtggccagtaatgcggcgggcaatgccagcatgtcagcctcgctg
gctgtgaagagcctgggcatcagcgatagatcgctctacaccaacaagagcggactcctg
gcggactccaacgggacctgggccaacggcaccctcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagccatgggctgcctgtctttcctgggcgtggtc
atcttctgtttcctcctcctgtttgcctggagtcgtgggaagggaaggcacaagagcaac
ttcgacattgagtacgttccccgcaaatcgaacgggacagcagcagaggcaaatgaaaca
agcgggcccagacgagtcaacatgaaaatgatttaa
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