Oncorhynchus masou masou (cherry salmon): 135508135
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Entry
135508135 CDS
T10723
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04137
Mitophagy - animal
omm04140
Autophagy - animal
omm04148
Efferocytosis
Brite
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135508135
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135508135
NCBI-ProteinID:
XP_064784196
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Position
21:complement(31660891..31684946)
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AA seq
766 aa
AA seq
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MFSFTLDASDGSPQTVPSKSSRVSSDRRKEKSRDAARCRRGKESEVFYELAQELPLPHSV
TSNLDKASIMRLAISYLHMRNLLSTDDEEEQEESEMDSQLNGSYLKAIEGFLMVLSEDGD
MIYLSENVNKCLGLAQIDLTGLSVFEYTHPCDHEELREMLVHRTGTSKKSKEPNTERSFF
LRMKCTLTNRGRTVNVKSATWKVLHCSGHVRVHESPAEQSPGGHKEPSVPYLVLVCDPIP
HPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLM
KTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNYVLSGIEEE
KMMLSLEQTEDMRPVKKELEEEESSEPEVSPVLLKEEKSPELDVIKLFTRAVETQPLSSL
YDRLKEEPEALTLLAPAAGDTIISLDFSSPDSDILQKEVPLYKDVMLPSTSDKLALPLSL
LPPSDQHLVPNTSVDTTEVSIGPDSSSTPGSHSFTEPDSSLDFCFPMESDISAEFKLDMV
ERLFAIDPEPKTPFTLQAMEDLDLEMLAPYIPMDDDFQLRTLSPEEPLSCGPAQPLECSS
VHLTQEVHSYPGSPFNAPGSLAASPALAAPEPADSPCPASLLTKMVPQIDREISLRSLAS
QNAQRKRKMSLSQAVGIGGLLQDRPGPGKKLKVSELSHADAPSNRTILLLPTDLASRLLG
ISSEGSGSPFTLPQLTRYDCEVNAPVGGRQLLLQGEELLSALDQVN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcacactggacgctagtgacggatcaccccaaacagttccaagtaaaagc
agcagggtgagctcggaccggaggaaggagaagtcccgggatgcggcgcgttgcaggagg
gggaaggaatctgaggtgttctacgagctggcccaggagctgcccctgccccacagcgtc
acctccaacctggacaaggcctccatcatgagactggccatcagttacttgcacatgagg
aatctgctgagcacagacgatgaggaggagcaggaggagagtgaaatggactcccagctg
aatggctcctatctgaaggctatagagggcttcctcatggtgctgtctgaggacggggac
atgatctatctctctgagaatgtcaacaagtgcttgggtctggcgcagattgacctgaca
ggacttagtgtgtttgagtacacacacccctgtgaccatgaggagctgagggagatgctg
gtacacagaacagggacctctaaaaagtccaaggaaccaaacacagaacgcagcttcttc
ttgcggatgaaatgtaccctcaccaacagggggcgcactgtcaatgtcaaatcagccacc
tggaaggttctccactgctcaggccatgtgcgggtccatgaatccccagctgagcagagc
cccggtgggcacaaggagccatccgtcccctacctggtgctggtctgtgaccccatcccc
cacccctccaacatcgaggcgccgctggacaccaagactttcctcagccgccacacactg
gacatgaagttcacctactgtgatgagaggatcactgagctgatgggctatgatcccgag
gacctgttaaatcgctctgtgtatgagtactaccatgccctggactcagaccacctcatg
aagacccatcacaacttgtttgcgaagggccaggtgagcacaggccagtaccgcatgctg
gctaagagaggaggctttgtgtgggtggagactcaggccactgttatctacaacaacaag
aactcccagccccagtgtgttgtgtgtgtcaactatgtgctcagtggcattgaggaggag
aagatgatgctctctctggagcagacggaggatatgaggcctgtgaagaaggagctggag
gaggaggagagctctgagccagaggtgtcccctgtgctcctgaaggaagagaagagccca
gagctggatgtgatcaagctgtttacccgggcggtggagacccagcccctgtccagcctg
tatgaccgcctgaaggaggaaccagaggccctcacccttctggccccggccgctggagac
accatcatctccctggacttcagcagccccgactctgacatcctgcagaaggaggtgcct
ctctacaaggatgtgatgctgccctccaccagtgacaagctggccctgccactctctctg
ctgccccccagtgatcagcacctggtccccaacacctcagtggacaccactgaggtgtcc
attggtccagattcctccagcaccccaggcagccacagcttcactgagcctgacagctca
ttggacttctgttttccaatggagtctgacatcagtgctgagtttaaactggacatggtg
gaaagactgtttgccatcgacccagagccaaagactcctttcaccttacaggccatggag
gacctggacctggagatgttggctccgtacatccccatggatgatgacttccagctgcgc
accctgtccccagaggagcctctgtcttgtggcccagcccaacccctagagtgctcttct
gtgcacctcacccaggaggtccacagctaccctggctcccccttcaatgccccaggcagc
ctggcagcttccccagccctggcagccccggagccagcagatagcccttgccctgcttcc
ttactcaccaagatggtgcctcagattgacagggagatctcccttagatcactggcctcc
cagaatgcacagcgcaagaggaagatgtctctgtctcaggctgtcggaatagggggattg
ctccaggaccgtcctggtccaggtaaaaagctcaaagtgtctgagctgagccatgctgat
gctccctccaacaggaccatactgctcctgcctacagacctggcaagccgtctgcttggc
atctcatcggagggcagcggctcacccttcacccttcctcagctgacccgatatgattgt
gaggtcaacgcccccgtggggggtcgccagctcctgttgcagggtgaggagctcctgagt
gccctggaccaagtcaactga
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