Oncorhynchus masou masou (cherry salmon): 135508341
Help
Entry
135508341 CDS
T10723
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135508341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135508341
03021 Transcription machinery [BR:
omm03021
]
135508341
03036 Chromosome and associated proteins [BR:
omm03036
]
135508341
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
ARID
135508341
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135508341
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135508341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
135508341
NCBI-ProteinID:
XP_064784524
LinkDB
All DBs
Position
21:39802484..40125365
Genome browser
AA seq
2406 aa
AA seq
DB search
MAAQVASAPTLTNNKNNTLSGNLGQEIHSGKSGGGNISRSGEMLGAVDGTNTMNNVDHHH
RNELNMVNSTYSPNNNSDTSEKDSGNNVTSSDSTISPGRMETGLIENHKLKNVGSGDPLQ
HPTPPQQQSQFNPFPQHQQRQIQSNNNNNSQATRGESENHHHGGKEGVLGSQSEQQMLNK
GDGDHTCKPGERMGARYEHSNLGPTTNNIISQPQSAGGNSEFNNYYGTSRVGPCYDQHGG
QQSTGMGMMHSSGPNNMDPVHNSQEGYHNSHYNHYPGYRQGYCGAGYGMMAPSRQGSNML
IGPGSNTPAGHVKAAMGAAACGSGGSVGVFQRFPGQSQHPTGATPTLNQLLTSPSPMMRG
YGSGYQDYNSPSAQQQDGIGLGKDMTSQYGSTTHGWPGQQRNHPSMSPGNGGPGISRPQV
VSKDFMAMKRSQLYGMGNNPYSQQQQGGPYPNQPYGSPTPHRYPMGMQGRGQVGIGGMQY
PQQPQGPPQYGQQGIGGYSQQQQQQQGTTPGPYFSPPQQNPTAPPSQPPYLPPHAPPQQE
APRESYVGRSQQQAPGNSGKANQEDMGLISQDRPSSLPDLSGSIDDLPTGTEAGHSSAIS
ATGSTSSQGEQSNPAQSPFSPHASPNLSGQGSGPSSSPVGSPVGSNQSRSGSGPISPVSG
PTTAPGSQMAPQTPGNMLDVPHPPLTQSPMPQERGFMSNMQRNQSGSQFAPPPQSGPSMP
PHPSPGPGGQMYPGMGPYPHGGSSGPYGPQGTQANQYGPQGNDPRPPNYGGTPSANYSSP
GPGSGMTNSQGMNASSPMHGQGPGQPMGRSPGVGSRPYPNMAPSSPSMPQPAGPGMGPPS
LGNVNRKAQEAAAAVMQAAANSVQGRQGSYPGPGMNLMGTAGSGAPYNQSPGNNSGMGTP
QGPPYNMPPSGAVGMAVSGMMNPDGKQKTGGKEENMPTNEPPKLKDGHSGSQCVSQPTTP
GAMLVPSPLSPSPASLSSYHGDDSDSISSPIWPKTPSSPKLNSSTMTNERITRLYDMGGE
PERRGWVDRYLSFMEERGTPVPHLPAVGKKPLDLCRLYMAVREIGGLALVNKNKKWRELS
TNLSVGTSSSAASCLKKQYIQYLFAYECKVERGEDQPADSNTGTGGENRKQAKVQPPSPA
NSGSVQGPQTPQSSGSSSMAEMSGDLKPPTPATTPQGQVTPIPASRSSVVSVQDPFSEVS
DPAFQKRNSLPLVGSGGVYQQGVNLPPNMMMRMQYEKDPFVGMRKVAGGEPYMPGQMISG
GIQDMYGRSTSGMGQRCPYPYGPGYDRRPDHLMGMEGSMGPPGNQSNMGPSNSEGSIYSP
NRYPSQQRHEGYAQQYPGMSYGMHPSGMYPQQQRTMESMYGSPGKRHEGEMYGPPAKRHE
GEMYGPPAKRHEGEMYGPPAKRHEGEMYGPPAKRHEGEMYGPPAKRHEGEMYGAPAKRHE
GEMYGPPAKRHEGEMYGPPAKRHEGEMYAMQYRGQQPDMYNHYTTGYSGPERRPMQGQFP
YPSPYSRERMQASGQGQHPMGPQMMSGGPPSNNGVEGPQGPNMWPSRTDMGYPYPNRQGA
PSQVPPYGPMGRGDDLEGRPIQDGQWLGHGGHRQSSYMSGGMTPMSSRQPPSAYQTSPSM
ANHLPRAPSPGSFQRSMEARMSPNKAVFMGSMKMPGKPGMPMPGQGNGHPGQVAPNLLRD
LNYPLGSVEATMPVFKPRRKITSKDTGTPEAWRVMMSLKSGLLGESTWALDTINILLYDD
RSVASFTLTQLPGFLELIVEYFRRCVMEIFGILEEYEIGTIGQNTLLGAEACDQGEELTS
EPEMDCEASPPEPEQEQEVERGETGKGEVEKGEEKPVDITEKMTAEGMSPLSATEPAPEG
TKEESEAEMKVKKEEGEKEKEGEKEKEGEKEKEEEKEKEGEKEKGKENEESEKPTESKEA
SAESKEDSSYQAPSEHEPRPQQASKYDKFPVKILHKEDLIEDTTEQLGHVTEFTSGLLHW
QAGGGDSTAHIQAHFERRGEHPDRMDGERDECASLNKEKDTEGGKQTEMGITATIDDILC
ARLGALSEGHPTHSAPTYPFRLHQGGGHQHITLLEDEPRCLDEAPLSTSSPWQDSLAKRC
LCVSNIIRSLSFIPGNDSDMSHHPGLVLILGRLLLLHHQHPERKRTLPSYQREDVQERGL
ACSKDEWWWNCLATLRENTFVTLANISGQLDLSLYPETICLPILNGLLHWMVCPSAEAQD
PFPSGTPHSPLTPQRLVLECLCKLSIQDNNVDLLLATPPFSRQEKLYATLVRYVGQRKNQ
VYREMAVATLSNLAQGDSTAARAIAIQKNSVGNLMGFLEDGVSMAQYQQNPHSMLHMAHH
PPMEPPSINMMCRAAKALLAMAKVEENRPEFVLYEGRILDISISSVLNQGVTRIICEVLF
QFVKKL
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcagcaccgacattaactaataataagaataacacattgtct
ggcaatttgggtcaagagatacattcagggaaatcaggaggaggaaatatatcgagatct
ggagaaatgcttggagctgttgatgggactaacacaatgaataatgttgatcaccaccac
cgaaatgagctcaacatggtcaattcaacttattctccgaataacaattctgacacatcg
gagaaggatagtggaaataacgtcacttcgtcagattcgacgatatctccggggaggatg
gaaaccgggttgatagagaaccataaactgaaaaatgttgggagcggagatccccttcag
caccccacaccgccgcaacagcagtcacaatttaacccgtttcctcagcatcagcagcgc
cagatacaaagtaacaacaacaacaacagccaagcaacaaggggagagagtgagaatcac
catcacggagggaaggagggtgttttgggtagccagtcagagcagcagatgctaaataaa
ggtgatggggatcatacctgtaaaccaggggagcggatgggtgctaggtatgaacattcc
aacttgggaccaacgaccaacaacatcatcagccagccccagagcgcgggaggaaacagc
gagtttaataactactatggcacttccagagtagggccctgctatgatcaacatggcgga
caacaaagcacagggatggggatgatgcactcttcgggacccaacaacatggacccagtg
cacaactcccaagaagggtaccacaacagccactacaaccactatcctggctaccggcag
ggctactgtggcgcgggctatggcatgatggccccgtccagacagggcagtaacatgctg
attggccctggcagcaacactccagctggccatgtcaaggctgctatgggagctgctgcc
tgcggttctggtggaagtgttggggtctttcagagattcccaggacagagtcagcatcct
accggggccaccccgacactaaaccaattactgacatctccaagtccaatgatgcgaggt
tatggcagtggctatcaagactataacagtccctctgcacaacaacaagatggcatcggc
ctgggcaaagacatgacttctcagtatggctccacaacccatggctggccagggcaacag
agaaatcacccgtccatgagtcctggaaacggagggccaggtatcagcagaccacaggtg
gtctctaaggacttcatggctatgaagcgctcccagctctatgggatgggcaacaacccc
tactctcagcagcagcagggtgggccctatcccaaccagccatacggatcgcccactcca
caccgatacccaatggggatgcaggggaggggccaggtgggcattggcgggatgcagtac
cctcaacagccgcagggtcccccccagtatggccagcagggtataggaggatacagccag
cagcagcagcaacagcagggaacgaccccgggaccctacttcagtcccccccagcagaac
cctaccgcccccccttcacagcccccctacctgccaccccacgccccacctcagcaggag
gctcctcgggagagttacgtaggcaggagtcagcagcaagccccagggaattctgggaag
gccaaccaagaggacatgggtctgatctcgcaggaccgcccctccagcctcccagacctt
tctggctccatagatgacctccctacaggtacagaggctggtcacagttcagccatcagt
gctacaggctccaccagtagccagggggagcagagtaacccagcccagtcacccttctca
ccccacgcgtcacccaacctgtctggtcaaggcagcggcccatcgtcctctcctgttggg
tcccctgtgggctccaaccaatcacgctccggctctggccccatctcccctgtcagcggc
ccaaccacagcaccaggttcccagatggccccccagactcctggcaacatgttggatgtt
ccccacccccccttgacccagtcccccatgcctcaggaaaggggctttatgtccaacatg
cagagaaaccagtctggctcccagtttgcaccaccacctcagtcagggccctccatgccc
cctcacccctctcctggtcctgggggacagatgtacccagggatggggccctacccccat
ggtggctccagtggcccctatggaccccagggaacccaggcaaaccagtatggaccccaa
ggaaacgacccacgtccacccaactacggcgggacccccagtgccaactacagcagcccc
gggccaggctctggcatgaccaacagccagggtatgaatgccagcagccccatgcacggc
cagggtcccgggcagcctatgggccgcagtcctggtgtgggcagccggccctaccccaac
atggcccccagctcccccagtatgccccagccagccggccctgggatgggccctccttca
ctgggcaatgtcaaccgcaaggcccaggaggcagccgccgctgtcatgcaggccgcagcg
aactctgtacagggcagacagggcagctacccaggccctggcatgaacctgatgggaaca
gcaggatctggagccccctacaaccagtcaccaggcaacaactcaggcatgggcacacca
cagggtccaccctacaacatgccaccctcaggggccgtggggatggctgtgagtgggatg
atgaatcctgatgggaagcagaaaacaggtggcaaggaggagaacatgcccaccaatgaa
cccccaaaactaaaggatgggcacagtggatcccagtgtgtctcccagcccaccacccct
ggtgccatgcttgtcccctctcccctgtcccccagcccagccagcctgtcctcctaccat
ggggatgacagtgacagcatcagcagccccatctggccaaagactccctccagccctaag
ctcaactcgtccaccatgactaacgaacgaatcacgcgcctgtatgatatgggtggggag
ccggagaggcgtggctgggtggaccggtacctgtccttcatggaggagaggggtacacct
gtcccccaccttcccgccgtgggcaagaagcccctggacctctgcagactctacatggct
gtcagggagatagggggcctagccctggtgaacaagaacaagaagtggcgtgagctgtcc
accaatctgagtgttggtacctccagtagcgccgccagctgtctgaagaagcagtacatc
cagtacctgtttgcctatgagtgtaaggtggagcggggagaggaccagccggccgacagc
aacactgggactgggggggaaaacaggaagcaggccaaggtgcagccgccctctcctgct
aactcagggtccgttcagggcccccagaccccccagtcatcaggcagcagctccatggca
gagatgtcaggtgacctgaagcctcccaccccagccaccaccccccagggacaggtcacc
cccatcccagccagcaggagcagtgttgtgagtgtgcaggacccgttctctgaggtgagc
gacccagccttccagaaacgtaactctctccccctggtgggctctgggggtgtgtaccag
cagggggtcaacttgccccctaacatgatgatgaggatgcagtacgagaaggaccccttc
gttggcatgagaaaggtggcaggaggggagccctacatgccaggccagatgatcagtggt
ggcatacaggatatgtatggcaggtctacatcaggcatgggccagcgctgcccctaccca
tatggaccaggctacgacaggagaccagaccatctgatggggatggaggggagcatgggc
ccccccgggaaccagagcaacatgggaccttccaacagcgagggcagcatttactctccc
aacagatacccctcgcagcagagacacgaaggctacgcgcagcagtaccctggcatgtca
tatggaatgcacccctcagggatgtaccctcaacaacagcgcaccatggagagcatgtac
gggtccccaggcaagagacatgagggggagatgtatggccccccagcaaagagacatgag
ggggagatgtacggccccccagcaaagagacatgagggggagatgtacggtcccccagca
aagagacatgagggggagatgtacggcccaccagcaaagagacatgagggggagatgtac
ggccccccagcaaagagacatgagggggagatgtacggcgccccagcaaagagacatgag
ggggaaatgtacggccctccagcaaagagacatgaaggggagatgtacggccccccagca
aagagacatgagggggagatgtatgccatgcagtataggggccagcagcctgacatgtac
aaccactacaccactggttactctggacctgagaggaggcccatgcagggccagttcccc
tacccttccccttatagccgagaacgcatgcaggcctctggccaggggcagcaccccatg
ggcccccagatgatgtccggggggccaccctctaacaacggagtggaaggtccccagggg
cccaacatgtggccctccaggacagacatgggttatccctaccccaacagacagggggca
ccctcccaggtaccgccatacggtcctatggggagaggagatgatttggagggccgaccc
atccaggatggtcagtggcttgggcacggaggccatcgccagtcctcctacatgtcaggt
ggtatgacccccatgtcctcccgccagcccccctctgcataccagacctccccctccatg
gccaaccacctgccccgagcccccagccccggctccttccagcgctccatggaggcacgc
atgtcccccaacaaagctgtctttatgggctccatgaagatgccaggcaaaccagggatg
cccatgccagggcagggtaatgggcacccaggccaagtcgcacctaacctgctgagagat
ctcaactaccctctaggatctgtagaggctaccatgcccgttttcaagccacgtcgcaaa
attacctcaaaagacactggaaccccagaggcgtggcgagtgatgatgtctctgaagtca
ggtctgctgggtgagagtacgtgggccctggacaccatcaacattctgctgtatgatgac
agatctgtggcctccttcaccctcacacagttgcctggcttcctggagctgatagtggag
tacttcagacgctgtgtgatggagatctttggcatcctggaggagtatgagatagggacc
atcggccagaataccctccttggggctgaagcctgtgaccagggggaggagctgacctct
gaacctgagatggactgtgaggccagcccaccagagcctgagcaggagcaggaggtggag
aggggggagacggggaagggggaagtagaaaagggggaagagaaacctgttgacatcaca
gagaaaatgacagcggaagggatgtcacccctcagtgcaacggaaccagctcctgaggga
acgaaggaggaatctgaagccgagatgaaggtgaagaaggaagagggggagaaagaaaag
gagggggagaaagaaaaggagggggagaaagaaaaggaggaggagaaagaaaaggagggg
gagaaagaaaaggggaaagagaatgaggagagtgaaaagccaaccgagagtaaggaagcc
tcagctgaaagtaaggaagactcttcttatcaggctccttcagagcacgagccaaggcca
caacaggccagcaagtacgacaaattccctgtcaagatcctgcacaaagaggacctgatt
gaggacacgacagagcagctgggtcacgtgacagagttcactagcggactgctccactgg
caggcaggcgggggtgattccaccgcccacatccaggcccactttgagcgcaggggagag
caccctgacaggatggatggagagagagatgaatgtgccagtctcaataaagaaaaggac
acagaggggggaaagcagacagagatgggtatcactgccaccatcgatgatatactgtgt
gcccggttaggggctttgtcagagggccaccctacccactctgcccctacctaccccttc
aggctgcaccagggagggggccaccagcacatcaccctgctagaggacgagccccgctgt
ctggacgaggctcccctctccacgtcctccccctggcaggactccctggccaaacgctgc
ctctgtgtgtccaacatcatccgcagcctctccttcatccctgggaacgactcagacatg
tcccatcacccaggcctggtgctgatcctgggcagactgctgctgctccaccaccagcac
ccagagaggaagaggacgctccctagctaccagagagaggatgtgcaggagcggggcctg
gcctgcagtaaggatgagtggtggtggaactgtctcgctacactcagggagaacaccttt
gtcactctggctaacatctctggccagctggacctgtccctctacccagagaccatctgc
ctgcccatcctgaacggcctgctccactggatggtgtgtccctctgccgaggcccaggac
cccttcccctcaggcaccccccactcgcccctcaccccccagagactggtgctggagtgc
ctttgcaagctgagcattcaggacaacaacgtggacctgctgctggccacgccgcccttc
agccgccaggagaagctgtatgctaccttggtgcgttacgtgggccagcgtaagaaccag
gtgtaccgcgagatggccgtggccaccctatccaacctggctcaaggagactctacggca
gcacgcgccatcgccatacagaagaatagtgtgggtaacctgatgggcttcctggaggat
ggagtgagcatggcccagtaccagcagaacccccacagcatgctgcacatggcccaccac
ccccccatggagccccccagcattaacatgatgtgtcgggctgccaaagctctgctggct
atggccaaggtggaggagaacaggccagagtttgtcctgtatgagggacgaatcctggac
atctccatctcctctgtgctcaaccagggggtgaccagaatcatatgtgaagtacttttt
cagtttgtaaaaaaattatga
DBGET
integrated database retrieval system
