Oncorhynchus masou masou (cherry salmon): 135508544
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Entry
135508544 CDS
T10723
Symbol
neff2
Name
(RefSeq) LOW QUALITY PROTEIN: neurofilament light polypeptide
KO
K04572
neurofilament light polypeptide
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135508544 (neff2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135508544 (neff2)
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135508544 (neff2)
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
135508544 (neff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Fib_alpha
DUF7201
ATG17_like
Phasin
DUF1002
Bacillus_HBL
DUF5740
Filament_head
PqqD
FapA
Motif
Other DBs
NCBI-GeneID:
135508544
NCBI-ProteinID:
XP_064784874
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Position
21:complement(54952089..54957797)
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AA seq
399 aa
AA seq
DB search
MSYDPYISYRRTWDSYRGSSRPSTTKSFMYSPLYSSSSSRALGLAAGKQRPPXSSSLPDA
SARMDLAEASSLNTELLGLRSQEKEQLVGLNDRFATYIDKVRRLEQQNRALLAELEALRR
RQRDPSRLQGXYEGEARSLRAAIDQKTGDKMRMEAERDYLKDVYGQLKERYEEEAQCRAD
AEEALQRAREEVGRAMLCNCDAEASVVSLAEEMGFLKKVFVEEQAELQAQVVAANVCVDM
EVSRPDLSAALKEIRAQYERLANKNMQAAEDWYRGKFESVAEMASKNNEAVRSIREETME
YRRLLQSRSSEIEALRNVIESLNKQLEELEEHQGEEVTKYQVRINDLECDINEAKQEMSR
YLREYQDLLNVKMALDIEIAAYRKLLEGEEFRLTFSALN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgatccttatatctcctaccgccgcacttgggacagctaccgaggctcttct
cgaccttccaccaccaaatccttcatgtactcccctctctactcctcctcttcctcccga
gccctgggcctggcggctgggaagcagcgtccacccncctcttcctccctgccggatgca
tctgcacggatggacctggccgaggcctccagcctcaacacagagctgctggggctccgc
agtcaggagaaggagcagctggtgggcctcaacgaccgcttcgccacctacatcgacaag
gtgaggcgcctggagcagcagaaccgggcccttctggcagagctggaggctctcaggcgg
agacagagggacccgtctcgtcttcagggcntctacgagggtgaagcccggagcctcagg
gctgcaatcgaccagaagacaggagataagatgcgcatggaggcagagagggactacctg
aaggacgtgtacgggcagctgaaggagcgctatgaggaggaggcgcagtgccgcgcggat
gcggaggaggccctgcagagggcccgggaagaagtggggcgggccatgctgtgtaactgc
gatgcagaggccagcgttgtctccctggccgaggagatgggcttcctgaagaaggtgttt
gtggaggagcaggcagagctgcaggcccaggttgtggcagctaacgtgtgtgttgacatg
gaggtgagcagaccagacctgtctgcggcactcaaggagatccgggcgcagtacgagcgg
ctggccaataagaacatgcaggcggccgaggactggtaccgggggaagtttgagtccgtg
gcggagatggcatcgaagaacaacgaggcggtgcgctccatccgggaggagaccatggaa
taccgccggctgctccaatcacgctcctctgagatcgaggccctgcggaacgtcatcgag
tcgctgaacaaacagctggaggagctggaagagcaccagggggaagaggtcacgaagtac
caggtgaggataaacgatctggagtgcgacatcaacgaggcaaagcaggagatgtctcgc
tacctcagagagtaccaggaccttctcaatgttaaaatggctctggacattgagatcgca
gcatacaggaaactgctggagggagaagagttcaggctgaccttctctgccctgaactaa
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