Oncorhynchus masou masou (cherry salmon): 135508687
Help
Entry
135508687 CDS
T10723
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135508687 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135508687
NCBI-ProteinID:
XP_064784992
LinkDB
All DBs
Position
3:1667378..1703763
Genome browser
AA seq
678 aa
AA seq
DB search
MFSSDQSCWFVRKVICWRAVASMAWSVLLLLPTTALFVLLSRFSLFHPILWISECLSLLT
SASAIFSFILLCGVVLMVGFFNLEYYTVVPSIACSKIALLGQVLHPRQFVHSLVHCIMGV
VVAWCCAFTIGGRYRSLGHPCTQDESSSGPEMCLNEFHLVLLLVGAFIGYSHSLVGVVYN
MNYVSFHTMQQYKYLRFKGALPLVVKASAVQALYCLRTFLLLYFFMGYAPRAWICKTLDL
NINSSIHSLDSVSSLLDLSLLYHLWISGTFLLLTWYITVLLFRIFVTEVYSFPVQSTFTE
DAHQSLPKVITGTQPMILKFLALQDLALLSQHSPSRRLEVFSLSQPGGHPHIWTALSKEC
LSLLSDLTERLVAHHDTVATNGRAKSQSIGSNKRSTTTSEGSVTSVGMEDMKTPRPGALI
RTPGSVFLRSSVGAGLRTPLTTPFTPDLDSPFSSPALRRLTGPLEPQGALSPGFSSIQSP
HVMRRGPKLWSASTDSQLNGSPPPSPGPAPSPSQAQLKPSFLVTFLQNRKDQVKYFLAKR
MLITYLFNKLPEASSQALFADSQVHIWALQGLSHLVAASFSEDQYGIVQTTLPTILSTLL
LLQEAVDRHFKLPHTSSKPGHCSCSMGDDSYKTLRFALRSTLKTAVYRITATFGGHLHAV
QMSAEHRKRLQHFLEYKE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatcggatcaaagttgttggttcgttcgtaaggtgatatgttggagagcagta
gccagtatggcgtggtctgtcctgctgctgctgcccaccacagctctgtttgtacttctc
agcagattcagtctgtttcacccgatactctggatatcagaatgcctgtccctattgacc
agtgccagtgccatcttctccttcattctgctatgtggagtggtattgatggtgggcttt
ttcaacctggagtattacacagtcgtcccatccatcgcctgttccaagatcgccctcctg
ggtcaggtgctccacccccgtcagttcgtccactcgctggtgcactgcatcatgggtgtt
gtagtagcttggtgttgtgccttcaccatcggagggcgctacaggtccttggggcacccc
tgtacacaggatgagagtagtagtggtcctgagatgtgcctgaatgaattccacctggtg
ctgctgctcgtgggggccttcattggctacagccacagcctggtgggagtggtctacaac
atgaactacgtttctttccacaccatgcagcaatacaagtacctccgcttcaagggagct
ctgcccctagtggtgaaggccagtgctgttcaggctctctactgtctcaggaccttcctc
ctgctgtatttcttcatgggatatgcaccacgagcctggatctgtaagacacttgacctc
aacatcaacagttcaatccattccctggacagtgtgtctagtctattggacctgtccctc
ctgtaccacctgtggatcagtgggaccttcctcctcctcacctggtacatcacagtactg
ctcttcaggatctttgttaccgaggtttacagttttcctgtccagtccacgttcacagag
gacgcccaccagagcctgcccaaagttatcactggcacgcaaccaatgatactgaagttc
ctagccctccaggacctggctctgctgtctcaacattctccttctcgacgtctggaggtg
ttcagtctcagccaaccaggtggtcaccctcacatctggacggccctgagtaaggagtgt
ctgtctctgttgtctgacctgactgagcggctggtagcccaccatgacactgtagcgacc
aacggacgggccaagtcccagtctatagggagcaacaagcggtccaccaccacctcggaa
ggctccgtaacttctgtcggtatggaggatatgaagactcctcggcccggcgccctgatc
agaacccctggctcagtgttcttgcgttcctctgtcggggcggggctgcgaactcccctg
accaccccctttaccccggacctagacagccccttctcctcccccgccctgcggcggctc
actggccccctggagcctcagggggccctgtcccccggcttcagctccatccagagccct
cacgtcatgaggaggggccccaaactctggtctgcttctacagactcccagctgaacggc
agtcctccgccatctcctggtcccgcccccagcccgtcccaggcccaactcaaaccctcc
ttccttgttaccttcctacagaacaggaaggaccaggttaaatatttcttggcaaagcgg
atgctgataacgtatctgtttaacaagctgccagaagcctccagtcaggccctgtttgct
gacagccaggttcacatatgggctctgcaaggtctgtctcacctggtggcagcgtccttc
tctgaggaccagtatggaatagttcagaccaccctgcctaccatcctcagtaccctactg
ctgttacaggaggctgtggatcgtcacttcaagctaccccatacctcctctaaaccaggt
cactgttcctgcagtatgggagatgacagttacaagacgctccgcttcgccctgcgatcc
accctgaagaccgctgtctacaggatcacagccaccttcggaggacacctccacgctgtc
cagatgtccgcagagcaccgcaagagactgcagcacttcctggagtataaagagtga
DBGET
integrated database retrieval system
