Oncorhynchus masou masou (cherry salmon): 135508772
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Entry
135508772 CDS
T10723
Symbol
smc1b
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04110
Cell cycle
omm04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135508772 (smc1b)
04114 Oocyte meiosis
135508772 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135508772 (smc1b)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135508772 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
135508772 (smc1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_13
Stimulus_sens_1
Motif
Other DBs
NCBI-GeneID:
135508772
NCBI-ProteinID:
XP_064785069
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All DBs
Position
22:complement(12420826..12443363)
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AA seq
1236 aa
AA seq
DB search
MGFLKQLDVDNFKSWRGKQVIGPFKRFNCIIGTNGSGKSNVMDALSFVMGERAATLRVKH
TRDLIHGAHIGKPVSTTASVTMRYCDDNGEELNFCRSISGDSSEYRINGRQITLAKYTEE
LEKIGIVTKARNCLVFQGAVESIAMKNPKERTKMFERISQSLELSDDYDKKKEALQKAKE
DTQFHFNKKRTATAEKKQVSSEKLEAQKYQELVDDLNQGRLQLNLFQLYHNQQGLSALSK
TLRKRQEAVAGQKTGLNGWEQSIKAQKKEHGRFTRELQQIEKEIRGQEQTLSLRRSQYIK
AKVNTSHHLKKVDDTRGALEKSQRMGAKKEEELAEFHQELQELERAWRDYERHAQEELTD
RKADIQLEEEQLERYKELKELARKQGALLSQQTKKMHWEVKADHQKIEFDQRRKKEVEVS
IKHSQTQLGDFTRRVDKLEEYTNTCKSSLEESRQQEEVLSAELQRGRVRGEEVNQELGEV
LCELQNARLDSQESKRQQQRNEVLENLRRLYPDTLFGRLVDLCSPIHKKYQLAVTKVFGR
YMNAIVVSSEKVARDCIRFVKEERAEPETFLPIDYLDVSPLNERLRGVRGAKMMVDVVQC
SPTAPQLKKVIQFVCGNALVCEALKEARAIAFDGPERLKTVALDGTMFSKSGVISGGSSH
LRSKARRWEEKDMTKLKELKEQLTAELRGLVKLKRKEPELKQIQAQAQGXQTRLKYSHTE
LDTLRKKTIPNCHAEMSRLEAELANVESQLEMQKENMEIKELEMKKLQDRINQMEDVVFS
DFCAEIGVANIREYEQEHLKQQQDVDRKRLEFESQRTCLKAQLEYEQGQLEEQRKKMKKL
EETIAKEQCRVEEQKQEEEKLLVVMEESQSKVLDLKNHLLEKKTQASDSKAQVDQTMKSL
QESSREQVKLQREVISAETALEQLRIWKHNLLLGCKIQGLPITLLSGSLDEISEVQLDSE
SLTESTCTTMDIYEREALMVIDYSGLGAELKDLAGEEVDPQVERLKETVSSLEGVLQRST
APNLKALEKMSVVKDKFQGVVDAFDASTKAARRSNQEFEQVKAKRFRLFSQCFEHVSVVI
DQIYKQLCRNTSAQAILSAENPDEPYLDGINYNCIAPGKRFMAMDNLSGGEKAIAALALV
FAIHSFRPAPFFVLDEVDAALDNTNIGKVTSFIREQSRESLQIIVISLKEEFYSRADALL
GVYPEFNECMFSRMLTLDLSPYPLNEENGTEREKEM
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctaaagcagttggatgtggataattttaagtcttggcgagggaagcaagta
attggaccttttaaaaggtttaactgtattattggcacaaatggatccggtaagtcgaac
gtgatggatgccctgagcttcgtgatgggggaacgggcagcaactctccgcgtgaagcac
accagggacctcatccacggagcccacattggcaagccggtgtccaccacggccagcgtc
accatgcgctactgcgacgacaacggcgaggagcttaacttctgtaggagcatatcgggg
gactcctctgagtatcgcatcaatggcagacaaatcacccttgccaagtacacagaggaa
ctggagaagataggcattgtgactaaagctagaaactgtctggtattccagggggcggtg
gagtccatcgccatgaagaaccccaaggagcggaccaagatgtttgagcgcatcagccag
tctctggagctgtctgatgactatgacaagaagaaggaggctctgcagaaggctaaagaa
gacacgcagttccacttcaacaagaagaggacagccaccgcagagaagaagcaggtctcc
tcagagaaattggaggcccagaagtaccaggagttagtggacgacctgaaccaggggagg
ctgcagctaaacctgttccagctgtaccacaaccagcagggcctgagtgccctgtcaaag
accctgaggaagagacaggaggctgtggccggtcagaagacaggactgaatgggtgggag
caaagcatcaaggcccagaagaaagaacatggacgctttaccagagagctgcagcagatt
gagaaggagatccgtgggcaggagcagaccctgtccctgcgtcggtcccagtacatcaag
gccaaggtgaacacatcccaccacctaaagaaggtagacgatacccgtggggccctggag
aagagccagaggatgggtgccaagaaagaggaggagctggctgagttccatcaggagctc
caggagctggagagggcctggagggactatgagagacatgcccaggaggagttgaccgac
cggaaggctgacatacagctggaggaggaacagttggagcgctataaggagctgaaggag
ctggccaggaagcagggggccctcctgtcccagcagactaagaagatgcactgggaggtc
aaggctgaccaccagaaaatcgagtttgaccagcggaggaagaaagaagtggaggtaagc
attaagcacagccagactcagctgggggacttcaccaggagagtagataaactggaagag
tacaccaacacctgcaagagctctctggaggagtctcgtcagcaggaggaggtgctgtct
gcggaactgcagagagggagggtgaggggggaggaggtgaaccaggagttaggggaggta
ctgtgtgagctgcagaacgccaggctggacagccaggagagtaagaggcagcagcaacgc
aacgaggtcctggaaaacctccgcagactctaccctgacacactgtttggtcgtctggtg
gacctgtgcagccccatccataagaagtaccagctggccgtcaccaaggtgtttggacgc
tacatgaacgccatagtagtgtcgtcagagaaggtggctcgggactgcatccgctttgtc
aaagaggagagggccgaaccagaaaccttcttacccatagattacctggacgtgagccct
ctgaatgagcggctgcgcggggtgcgtggagctaagatgatggtggacgtggtgcagtgt
tcccctaccgctcctcagctgaagaaagtcatccagtttgtgtgtggcaacgctctggtc
tgtgaggcactcaaagaggccagagccatcgccttcgacgggcctgagcgactcaagacg
gtggctctggacggtaccatgttctccaagtctggggtgatctctgggggctccagccac
ctgcggagcaaggcccggcgctgggaagagaaggacatgaccaagctgaaggagctcaaa
gaacagctgactgcagagctacgtggtctggtgaagctgaagcgtaaggagcctgagctg
aaacagatccaggctcaggctcaggggnttcagacccgtctgaagtactcccacactgaa
ctggacaccctccgcaagaagaccattcccaactgccacgcggagatgtctcgcctggag
gctgagctggccaacgtggagtctcagctggagatgcagaaagagaacatggagatcaag
gagctggagatgaagaagctccaagacaggatcaaccagatggaggacgtggtgttctca
gacttctgtgctgagataggagtggccaacatcagggagtatgaacaagagcatctcaaa
cagcagcaggatgtagacaggaaacggttggagtttgagtctcagcggacctgtctgaag
gcccagttggagtatgaacagggtcagctggaggagcagaggaagaagatgaagaaacta
gaggagaccatcgccaaggagcagtgcagagtggaagaacagaagcaggaagaggagaag
ctgctggtggtgatggaagagagtcaatctaaagtgttggatctgaagaatcatctgctg
gagaagaagacccaggcttctgactctaaggcccaggtggaccaaacgatgaagagcctt
caggagagctccagagagcaggtgaagctgcagagggaggttatctcagctgagacagcc
ctggagcagttgaggatctggaaacacaacctgctgctaggttgtaagatccagggcctg
cccatcacgctgctgtctggcagcttggacgagatcagtgaggtgcagctggactcagag
tcactcacagagagcacctgcaccactatggacatctacgagagagaggcgttgatggtc
atcgactactctggtctgggagctgagctgaaggatcttgcaggggaggaggtggacccc
caggtagagcgtcttaaggagacagtgtcctctctagagggggtcctacagcgctccaca
gcccccaaccttaaagccctggagaaaatgagtgtggtcaaggacaaattccagggggtg
gtggacgcgtttgatgccagcaccaaggcagccagaaggagtaaccaggagtttgagcag
gttaaagccaaacgcttcagactcttcagtcagtgctttgaacacgtctctgtcgtcatc
gaccagatctacaaacaactgtgcaggaacaccagcgctcaggccattctgagtgctgag
aacccagatgagccctacctggatggcatcaattacaactgtattgctcctgggaaacgc
ttcatggccatggacaacctgtctggaggagagaaggccatcgctgccctggctctggtg
ttcgcaatacacagcttccgtccagctccgttctttgtcctggatgaggttgatgcagcc
ctggacaacaccaatattggcaaagtgaccagctttatcagggagcagtcgagagagagc
ctccagatcatcgtcatctctctgaaggaggagttctactctagagctgatgctctgctg
ggggtctaccctgagtttaacgagtgcatgttcagccgcatgctgacgctggacctaagt
ccctatcccctaaacgaagagaacggaacagagagagagaaggagatgtaa
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