Oncorhynchus masou masou (cherry salmon): 135508929
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Entry
135508929 CDS
T10723
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135508929 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135508929 (myo5c)
04131 Membrane trafficking [BR:
omm04131
]
135508929 (myo5c)
03029 Mitochondrial biogenesis [BR:
omm03029
]
135508929 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135508929 (myo5c)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
135508929 (myo5c)
mRNA cycle factors
P-body specific factors
135508929 (myo5c)
Membrane trafficking [BR:
omm04131
]
Others
Actin-binding proteins
Myosins
135508929 (myo5c)
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
135508929 (myo5c)
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
135508929 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
NPHP3_N
AAA_16
Csm1_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
135508929
NCBI-ProteinID:
XP_064785221
LinkDB
All DBs
Position
22:6252252..6322212
Genome browser
AA seq
1740 aa
AA seq
DB search
MALSELYTKYNRVWIPDEEHVWKSAEILRDFKPGDDTLQLQLEDGTEMLYSLDTSSPQLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLHVYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYF
ATVSKSGSKTHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMR
TYLLEKSRVVSQSESERNYHIFYQMCACADQPEFKSLRLLRADEFRYTSMGGETAIEGVD
DRKDMEETRRTFSLLGLTKDFQADVFKVLAGILHLGNVEIRNVGSDRSSISSSDPHIAAF
SDLLGVSPDGVTRWLCHRRFVMVAETVVKPVTSKRATNARDALAKQIYAHLFDCVIQKIN
AALRVPGKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQNWLQKLYNYLADNPLFEKP
RMSNEAFIIQHFADKVEYQCWGFLEKNRDTLYEELIDTMRTSKFPLLANFFLEEEPGGMG
SKGIKVRPARPGVKPTNKNLRTTVGEKFRSSLYLLMETLNATTPHYVRCVKPNEEKMPFE
YDSKRVVQQLRACGVLETIHISAQSYPSRWTYIEFYSRYSILMSQQELVLTDKKQTCRTV
LQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSHRRTFLRMR
EAAIILQQYVRGQRRIRKSVTAAALKQGWAAVVIQRYWRGHLTRQIFRMVRSSSIIIQAF
TRGWIARKRYKKMVEVQKALILQKYARAWLARRRFQTLRRLVHNVQLSYRCQQLRKKLED
QGKENCGLLERLTSLAGAHAQGLDKLHSLEAQLGKSATEKAALEEREKKSKEDAAKTIAQ
LQQEKDGFIVQKQDLEKKLADTATEMKDGFDQIKTTLKEDLEREERLRKIAENNLDLQKE
DHEKEVEVLREENRRLKEERVHLLRQTEEGAQVNTDLQDQVIQLTKHVKVIPELRKDLHN
LQTQRDDLDRRMKGQSEEAIAKMSVITRQLLGVMMEGEVISRLASDGPEQIYEAGDLLTA
FDGLQKATRVLERKQKEQKEVSDSQIEGLTFKVEHLQNENNQLQKLFQEKMSVNDSIGQE
VTRLNQENMVIPELKQTVSELQRHKQELEEQLEEQTRGMTEKIEEISKKLQMNVEEEASQ
RRLLEQHEQVEREKEEVERRVEELEEVLRRQKNTETEAKTRFTQEASRLTAENMDFEEQL
DMKDRLIRKLQNKIKSLQTSEKANQTPAPTIPKEYLGMLEYKREDEPKLIQYIILDLKPR
GVVVNMIPNMAAQLLFMCVRHADYLNDGAKLKSLMNAIISGVKKVITDHQADFELLSFWL
SNMYHMLNCLKQYSGEEEFMKQNSPRQKKNCLQNFDLSEHRQIFSDLAIRIYHQFISVME
KDLIPMIVPAMLEHESLQGISSMKPTGFRKRSSSIYEDQEIYTISSLLQQLSLYHSTMSQ
HGMEEGLVRQAVKQTFFLVGAATLNNILLRKDMCSCRKGMQIRCNISYLEEWLKEKDLVQ
GTSAMETLKPLCQAAWLLQVNKTTEDDAKEIVEQCSELNTVQIVKILNSYTPIDDFEKRV
APSFVRKVQGLLQDREGGSSQLMLDTQYRFQVTFPFTPSSQALELLQLPSSLRLGFITRI
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcggaactttatacgaagtacaacagagtgtggataccggatgaagagcat
gtctggaagtcagcagagatcctgagagacttcaaacctggagatgatactttacaactg
cagcttgaggatggcactgagatgctgtactccctggacacatccagtcctcagctccct
cacctccgaaaccctgatatcctggtgggggagaatgacctgacagctctcagctacctc
cacgaaccagcagttctacacaacctcaaagtgcgcttcgtggagtccaagatcatctac
acctactgcggaatcatcctggtggccgtcaacccctacaagcagcttcacgtctatggc
gatgcagtcatccacgcctacagtggacagaacatgggtgacatggatcctcacatcttc
gctgtggcagaggaggcttataaacagatggccaggaacaataagaaccagtctatcata
gtgagtggtgagtctggagccggcaagaccgtgtctgccagatatgccatgaggtacttc
gctacggtcagcaagtccggcagcaaaacacacgtggaagacaaagttctggcatccaac
ccaataactgaggctataggaaatgccaagacgaccaggaacgacaacagcagtcgcttt
gggaagtacacagagatcagcttcgacaggagatatcagatcatcggagccaacatgagg
acatatctcctggagaaatctagagtggtttcccagtccgagagcgagagaaactaccac
atcttctaccagatgtgtgcctgtgcagaccagcctgagttcaagagcctgagactgttg
agggcagatgagttcaggtacaccagtatgggaggagagactgctatcgagggagtggac
gataggaaggacatggaggagacacgcaggaccttctctctgttggggttaaccaaggac
ttccaggctgatgtgttcaaggtgctggctgggattctacacctgggaaatgtagagatc
agaaacgttggatcagacaggtcatcaattagttccagtgatccccacatagcagccttt
agcgaccttctcggggtcagtcctgacggtgttacccgttggctgtgccaccgccgcttc
gtcatggtggcagagacggtggtgaagccggtcaccagcaagcgggcgacgaacgccaga
gacgccctcgccaagcagatctacgcccacctgttcgactgcgtcattcagaagatcaac
gcagcgctgcgggtcccggggaagcagcactccttcataggtgtcctggatatctacggc
tttgaaacattcgacatcaacagttttgaacagttttgcatcaactacgctaacgagaaa
ctgcaacaacagttcaacttgcatgtgttcaagctggagcaggaggagtacatgaaggag
gatattccctggactctgatagacttctatgacaaccagccggtcattgacctgattgaa
gctaagatgggcatcctggaccttctagatgaagaatgtctgttcccccagggtacagat
cagaactggcttcagaagctgtataactacctggctgacaaccctctgtttgagaagccc
aggatgtctaacgaagccttcatcatccaacactttgctgacaaggtagaatatcagtgc
tggggctttctagagaagaacagagacacactgtatgaagagctgatagacaccatgaga
accagtaagtttcctctcctggccaacttcttcctggaggaggagccaggcggaatgggc
agtaaaggcattaaagtgaggcctgcccgaccgggggtgaagccaaccaataagaatctc
aggaccaccgtgggtgagaagttccgcagttctctgtacctgctgatggagacgctgaac
gccaccactcctcactacgtacgctgcgtcaagcccaacgaggaaaagatgccattcgag
tatgactctaagcgggtggtccagcagctgagggcgtgtggagtcctggagaccattcac
atcagcgctcagagctacccctccaggtggacgtacatagagttctacagccggtacagt
atactgatgagccaacaggagctggttctcaccgacaagaagcagacttgtaggacggtg
ctgcagaggctgattcaggactccaaccagtacaagtttggccggaccaagatcttcttc
cgagcgggtcaggtggcgtacttggagaagttgcgattggaccgtctccgaggggcctgc
gtgaccatccagaagcatgtgagggggtggagccacaggaggacgttcctccgtatgagg
gaggcggccatcatcctgcagcagtacgtccgcggacagagacggatacgtaaatcggtg
acggctgcagcgttgaagcagggctgggctgctgtggtcattcagaggtactggagaggt
catctcaccagacagatctttagaatggtccggtcctcctcaatcatcatccaagccttc
actcgaggctggatcgccagaaaacgctataaaaagatggtggaagtgcagaaagcgctg
atcttgcagaagtacgcccgggcatggctcgccaggagacgcttccagaccctgcggcgc
ctggtacacaacgtgcagctctcctaccggtgccagcagctcaggaagaaactggaggat
cagggcaaagagaactgtgggttgctcgagaggctgacaagtctggccggtgctcacgcc
caaggtctcgacaagctgcacagtctggaggcccagctggggaaatcagccactgagaag
gctgcgctagaggagcgagagaagaagagcaaggaggacgccgccaagacgatcgcccag
cttcaacaggaaaaagacgggttcatcgtgcaaaaacaggacttggaaaagaagcttgca
gatacagcaacagagatgaaagacggcttcgatcaaatcaagacgactctgaaagaagat
ctggaacgagaagaaagattaaggaagattgcagagaacaaccttgacctgcagaaggag
gaccatgagaaggaggtggaggttctgagggaggagaacaggaggctgaaggaggagaga
gtccatctgctgagacagacggaggagggggcgcaggtcaacactgatctacaggaccag
gtcatacagctcaccaagcacgtcaaggttatacctgagttacggaaggatcttcataac
ctccaaacccagagagatgatctggaccggagaatgaaggggcagtcagaagaagcaata
gctaagatgagtgtgattacaagacaacttcttggtgttatgatggaaggggaggtcatt
tccaggttggcctccgatgggcctgaacagatatatgaagctggggatctgttgacggct
tttgatgggctgcagaaagctaccagagtgctggagagaaagcagaaggaacagaaagag
gtctccgacagccagatagaggggctgacgttcaaggtggaacacctgcagaacgaaaac
aatcagctgcagaaactgttccaagaaaaaatgtctgtcaacgacagcatcggccaggaa
gtgaccaggctgaaccaggaaaacatggtcatacctgaactgaagcagacggtgtcggag
ctacaacgacataaacaggaactggaagagcaactggaggagcagaccagagggatgacg
gaaaaaattgaggagatatcaaaaaagcttcagatgaatgttgaagaggaagcctcccaa
cgcaggctgttggagcagcatgagcaggtggagcgggagaaggaggaggtggagaggagg
gtggaggagctggaggaggtgctcaggagacagaagaacacggagaccgaggccaagacc
agattcactcaggaggcatcacgactcactgcagagaacatggactttgaagaacagctc
gacatgaaggatcggttgataaggaagctgcaaaataaaatcaagagtcttcaaacatcc
gagaaagccaatcaaacgccagcgcccactattcccaaagaatacctcggaatgttggag
tacaagagggaggatgaacccaagctcattcaatacataattctggacctgaagcccagg
ggggtagtggttaacatgatccccaacatggccgcccagcttctcttcatgtgtgtccgc
cacgctgactacctcaacgacggagcaaagctcaagtccctcatgaacgccataatcagc
ggggttaagaaggtcatcacggatcaccaagcagactttgaattgctgtcgttctggctc
tcgaacatgtaccacatgctcaactgtctgaagcagtacagtggagaggaggagtttatg
aaacagaactctccgcgtcagaagaagaattgcttacagaactttgacttgtctgaacac
agacagatcttcagtgatctggccatccgtatctaccaccagtttatatctgttatggag
aaggatcttatacccatgattgttcctgctatgctggagcatgagagtctccagggaatc
tccagtatgaagcctacaggtttccgtaagcgttccagcagtatctatgaggatcaggag
atctacaccatttcttctctcctccagcagctcagtctgtaccacagcactatgagtcag
cacggcatggaggaggggctggtcagacaggctgtgaaacagactttcttcctggtggga
gcggccacactcaacaacatcctgctacgcaaagacatgtgctcctgtaggaagggcatg
cagatcaggtgtaacatcagttacctggaggagtggctgaaggagaaggacctcgtgcag
ggtaccagtgccatggaaactctgaagcctctgtgtcaggctgcctggctactgcaggtc
aacaagaccactgaagacgacgccaaggaaatcgtagaacaatgctctgaactcaacact
gtgcagattgtcaagattctgaattcttacactcccattgatgattttgagaaaagggtg
gcaccgtcgtttgtccgcaaagttcagggcttgctccaggaccgtgaggggggatcctcc
cagttgatgttagacacccagtatcgtttccaggtcaccttccccttcaccccgtcctct
caggccctggagctactacaactgccatccagcctcagactgggcttcatcaccaggatc
taa
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integrated database retrieval system
