Oncorhynchus masou masou (cherry salmon): 135509005
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Entry
135509005 CDS
T10723
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
Contactins
135509005
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omm00537
]
Others
135509005
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135509005
NCBI-ProteinID:
XP_064785357
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Position
22:10415759..10587694
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AA seq
1021 aa
AA seq
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MLHFTVLLLCLLSLTLTSTDASVFRGEPGFYSDDATGYGPVFEDQPVDTIYPEESPEAKI
TMSCRARANPPATYTWRLNSRNIDQDEDNHYTLVGGNLVISNPIKNKHVGKYTCMATNDY
GTVVSREAAVQFGYLDFFSSEEREAVYVKEGQGAVLLCAPPPHYPDELSFRWILNEFPVF
IPLDKRRFISQTTGNLFISKVDSSDSGNYSCFVSSASIAKSVFSKFIPLVPLAERPIRKY
PADIKVKFPDTFALVGQNITLECFALGNPIPQIRWRKMDGELPANHEVSMAGAHLQLYHV
QYEDEGTYECEALNSKGKDWHRARVSVEAFPEWTESISSTERDISSDYTMSCEANGKPKP
HVHWLKNGYSYDKHDLKFRGLTFEDSGMYQCRAENRHGVVYADAELRVIACAPTFEHNPV
KRRILGAKNGRVVLECRPKAAPKASLSWSKGSELLFNSSRMLIWEDGSLEILNVTRADEG
RYTCFAENDRGKANSTGFLSITEATKITLAPSNADVTAGESASMQCAASHDSTLDITYVW
TMDGRSIDFDRDGSHYERNPNGGSSGELIIKNTQLNHSGRYTCTAQTPVDNVSASADLVV
RGPPGPPGGVRVEEIRNKSVRLIWSSGADNHSPISKYTIQCRDWFSQEDWRDATTSPPDV
EGNAETATVVDLFPWTEYEFRVIATNTLGTGDPSSPSPKVTTLEAVPVVAPSDIGGGGGT
SKELTITWTPVQPQYYYGRNFGYIIAFKPHDVYEWMKVTVADPEAKHYVHKDSSIPASTE
FQVKVKAFNIKGEGPYSLTAVIYSAQDVPSEAPASVEARALSATEAIVWWLPVTQHTVEG
YQVRYWMKVEDREASSQRVVVSSRENQTRLENMRPNSPYLIEVRAYNAAGYGPPSHHFQI
YTKKAPPSRPPKIISKKLKGTSVNIAWEHVEPLANESTIDGYKVLYRKAGLSTGLLYTTG
KRSIDLPMPRDGDCVVEVRAHSEGGDGAVAQVRISGGAVMVTQSLSLASLLLVAMLCLLA
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacttcactgtgctcctcctctgcctcctgtccctgactctcacttctactgat
gcatcagtgttcagaggggaacctggcttctactcagacgatgctacaggttacgggcca
gtgtttgaggatcagccggtcgacaccatctaccccgaggagtcacctgaggccaaaatc
actatgagctgtcgagcacgagccaacccacctgccacatacacgtggagattaaacagc
aggaatatagaccaggatgaagacaaccactacactttggtgggaggcaacctggtcatc
tctaaccccatcaagaacaaacacgttgggaagtacacctgtatggccaccaacgactac
ggcactgtggtcagcagagaggccgctgtccagtttggatacctggacttcttctcctct
gaggagagagaggcggtgtatgtgaaggagggccagggggcagtgctgctctgcgctcct
cccccacactacccagacgagctgtcattccgctggattctgaatgagttccccgtcttc
atccctctggataaacgtcgcttcatctctcagactacggggaacctcttcatctctaag
gtggactcgtctgacagcggaaactactcctgctttgtctccagtgcctccatcgccaag
agcgtcttcagcaagttcatccccctcgtccccctggctgaacgcccaataaggaagtac
cctgctgatatcaaagtcaagttcccagacacctttgcactggtgggccagaacatcaca
ctggaatgcttcgccctgggaaaccccatccctcagatccgctggaggaagatggacgga
gagctgccggccaatcatgaagtcagcatggcaggggcccacctccaactgtaccacgtg
cagtatgaggacgaggggacgtacgagtgtgaggccctcaactccaaagggaaggactgg
caccgggctcgggtctctgtagaagccttcccagagtggacagagtccatcagcagtaca
gagcgggacatcagcagtgactacaccatgtcctgtgaggccaacggcaagcccaagccc
cacgtccactggctcaagaacggctactcgtacgataagcatgatctgaagttcagagga
ctgacgtttgaggactctgggatgtaccagtgtagagcggagaatcggcatggagtggtc
tatgctgacgcagagctgcgtgtgattgcgtgcgcccctacgtttgagcataacccagta
aagaggaggatcctgggggctaagaacggccgtgtggtcctagagtgtagacctaaagct
gctcccaaagcctccttgtcttggagcaagggctctgaactcctcttcaactccagcagg
atgttaatctgggaggatggtagtctggagatcctgaatgtgaccagggcagacgagggg
cgctacacctgcttcgctgagaacgaccggggcaaggccaacagcacaggcttcctctct
atcacagaggccactaagatcaccttggctccgtccaacgcggacgtgacggcgggagag
agcgccagcatgcagtgtgccgcatcacatgactcaacgctggacatcacgtacgtctgg
accatggacggccgctccatcgacttcgaccgggacggctcccactatgaacgcaacccg
aatggtgggtccagtggagagctgatcatcaagaacacccagctgaatcactctggacgt
tacacctgcactgcccagacccccgtggacaacgtctccgcatccgctgacctagtcgtc
agaggtccccctgggcctccaggtggggtacgtgtggaggagatcaggaacaagagtgtc
cgtctgatctggagcagtggagcagacaaccacagccccatctctaaatacaccatccaa
tgccgggactggttctctcaggaagactggagagatgccaccacatcccctccggatgtg
gaaggcaatgcagagacagccacggtggtggacctgtttccctggacagagtatgagttt
agggtgatagccaccaacaccctggggacaggagaccccagcagcccctctcccaaagtc
accacgttggaggctgttcccgtggtggcgccctcagacattggcggtggtggcgggacc
agcaaggagctgaccatcacttggacgccagtgcagccgcagtactactacggccgcaac
tttggctacatcatcgccttcaagccccacgatgtctacgaatggatgaaggtgactgtg
gcagaccccgaggctaaacactatgtccacaaagactcatccatccctgcctccacagag
ttccaggtcaaagtcaaggctttcaacattaaaggagaaggaccctatagtctcacggct
gttatctactctgcacaagacgtgccatccgaagcccctgccagtgtggaggccagggcg
ctgtctgccactgaggccattgtgtggtggctccctgtcacccagcacaccgttgaagga
taccaggtgcggtactggatgaaagtggaggacagagaggcatccagtcagagagtggtg
gtgtccagcagagagaaccagacaaggttggaaaacatgaggccaaactccccctacctc
atagaggtcagggcctacaatgcagccggatacggaccccccagtcatcacttccagatc
tacaccaaaaaagcccccccaagccggcctcctaaaataatcagtaaaaagctgaaagga
acatcagtaaacatcgcctgggaacatgtcgaacccttggccaacgagtcaacaatagat
ggatacaaggtcttgtacaggaaggcgggcctctccacaggtctactgtataccacaggg
aagcgatccatagacctgcccatgcccagggacggggactgcgtagtggaggtcagggcc
catagcgagggaggagatggggctgtggcccaagtacgcatctcaggtggagccgtcatg
gtcacccagtccctcagcctggcctctctgctcctggtggccatgttgtgcctgctggct
ctctga
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