Oncorhynchus masou masou (cherry salmon): 135509062
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Entry
135509062 CDS
T10723
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135509062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135509062
03036 Chromosome and associated proteins [BR:
omm03036
]
135509062
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135509062
Coactivators
SAGA/TFTC/STAGA complex
135509062
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135509062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
135509062
NCBI-ProteinID:
XP_064785446
LinkDB
All DBs
Position
22:complement(15190422..15208248)
Genome browser
AA seq
996 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLVSQKTSPATYSNIKREGSTGAVSQFSGK
LRDQAGSLEPPQQGHPKAALNAEPIANQAMSNKIISASTSSITTGGVLNAGTNLQTYGAA
SQTISTAPPGSVTLPAQSTSFNRGTILGPAGTSAVTVPNPNITTTTTIRTASPGLQSFNG
NTGALKLVNSPAASQVGSGSSTVVSTVSAGNSNIIVSMTSQPPSLPNFTGPQQSAVATTP
TIALQRQPSPMAIASQNGVIDPKVSAVVTQGAGSLGTTTSQVMNHSNTLMHTKMVAPNQP
VSAGQSIILGGSPPPVVVNSPISQPQSVASPTLTAGVKPTVNGVGQPTVTIVRPPGAPVM
ATPVQQQRPGLLASTTRTAAPQLAVRPPQKTTIQLPPGFTIPPGMVLVRTDTGQLVMVTQ
QVLAQAQAKTQQGQAAVSNISPQPGIPTAGANIRVSTPSQAPGTPQAVRLASPFQARMAQ
SPSPSSPAIQKAITVAPAGASVSVKMTTPQKAQSVITGGQALVKPGAVRPTITLNTAAAS
ASGSPIATVSQEMQENVKKCKNFLSTLIKLASHNSPSPDTSKNVKTLVQDLLDAKIEPEE
FTTSLQAELKSSPQPYLIPFLKKSLPALRLSLLNNQQSLLASTSASALAVPSTSTIRPRL
PTTISPATGIVRTPTTALGVRRPGVQGVQTRMPMVITQTIRPQGVVTRGPSIIPGRSPVG
IGAQASANQKKLNEPGGGTFRDDDDINDVASMAGVNLNEENARIMATNSELVGTKIRSCK
DEAFLPPGLLHRRIMEAAKRFGVTEVPAETVNYISHATQARLRSMLEKVSTIAQHRTDGG
KDEEWYEPSTDVRAQLRFFEQLERMEKQRKDEQEREVLLKAAKSRARQEDPEQARLKAKA
KEMQQAEQAQIRQREANLTALAAIGPRKKRKMDSPGGSTSGTEVASGSGDGSSTAASSRQ
QLRQRITRVNLRDFIFCLEQERATSRSLLLYKALLK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtagacgaaaaagct
gtaagcgacttagtgggctctttggaatcgcaacttgtcagccaaaagacttcgcccgcc
acatattctaatatcaagcgagaaggatctacgggcgctgttagccagttctcagggaaa
ctgcgtgatcaagcggggtctctggagccgccacaacaaggacacccaaaagcggcgtta
aacgcggaacccatcgcgaatcaggcgatgtccaataagattatcagcgcttccacttct
tccatcactactgggggtgttttaaacgctggtactaatctacaaacatatggagccgca
tctcaaaccatttccaccgcaccaccaggatcggtaactttgcctgctcagtcgactagc
ttcaacagagggactattttgggtcctgctggcacatcagcggtgactgttcccaatcca
aacatcacaacaacaacaactatcaggactgcttcacctggtttacagagttttaacggt
aacactggagctctgaagttggtcaactcgccagcagcttcccaagtcgggtcaggcagc
agcactgttgtaagtactgtcagtgcgggcaattccaatatcattgtgtccatgacttca
caacctccttctctgccaaactttactggacctcaacagtctgcagtggctactactccc
actattgcattgcaaagacagcccagccccatggccattgcctcacagaatggagtaata
gaccccaaggtttctgcagtggtcacacagggtgcaggttccctagggaccaccacctct
caggtcatgaaccacagcaacactctcatgcacactaaaatggtggcacccaaccagcca
gtctctgctggccaatcaataattctcggagggtctccccctcctgttgttgttaactca
ccaataagccagccacagagtgtggcgagtcccactctcacagctggggtgaaaccaact
gttaatggagttggtcagcccacagtgaccatcgtgaggccccccggtgctcctgtgatg
gctacccccgtacagcagcagagacctgggctgttagcaagtaccacgaggactgctgca
ccacagctggctgtcagaccaccacaaaagaccaccattcagttaccccctggatttacc
ataccacccggtatggtgctggtgcgtacggacacgggacagctagtgatggtgactcag
caggttctagcccaggcccaggctaagacccaacaaggccaggctgctgtctccaacatc
tccccccagcctggaatccccaccgctggggccaacatcagagttagcactcccagccag
gcccctggtacgccccaggctgtccgtctggcgtcccctttccaggcaagaatggcccag
tccccctctccctctagccctgctatacagaaggccataaccgtggcacctgcgggtgcg
tctgtgtcagtgaaaatgaccacccctcagaaggcccaatctgtgatcacagggggccag
gccttggtcaagcctggtgctgtacggcccactatcaccctgaacactgcagcagccagt
gcctctggaagccctattgcaacagtctcccaggaaatgcaggagaatgtgaagaagtgc
aagaacttcctgtccaccctgatcaaactggcgtcccacaactccccctcccctgacaca
tctaagaacgtcaagactctggtgcaggatctactggatgctaaaatcgagcctgaggaa
ttcaccacgagtctgcaggctgagctgaaatcctctcctcagccgtacctcatccccttc
ctcaagaaaagcctccctgccctgcggctgtcccttctcaacaaccagcagtctcttctg
gcctccacctccgcttctgccctggccgtcccctccacctccaccatcaggccccggctc
cccaccaccatcagccccgccacaggcatcgtcaggacacctaccactgccctgggtgtg
agaagaccaggagtccagggggtccagacccgcatgcccatggtcatcactcagactata
cgaccgcaaggcgtagttacaagaggaccctctattatcccgggaagaagtcctgtgggc
attggtgcccaggcctctgccaatcagaagaagctgaatgagcctggaggtgggacgttc
agagatgacgatgacatcaatgacgtggcgtccatggcgggggtaaacctgaacgaggaa
aacgcccgcatcatggccaccaactctgagctggtgggcaccaagatccgctcctgtaag
gacgaggccttcctcccgccaggcctgctacacagacgcatcatggaggctgccaagaga
tttggggtgaccgaggttccagctgagacagtgaactacatctcccatgctacccaggcc
agactgagatctatgctggagaaagtgtccactatcgcccagcaccgcaccgacgggggc
aaggatgaggaatggtatgagccgtcgacagacgtcagggcccagctccgcttttttgag
cagctggaaaggatggagaaacagaggaaggacgaacaggagagagaggtcctactcaag
gctgccaagagtcgcgccagacaggaggacccagaacaagctcggttgaaggcgaaagct
aaggagatgcagcaggcagagcaggcccagatccggcagcgtgaagccaacctcactgcc
ctggctgccatcgggccccgtaagaaacgcaagatggactcgccagggggctccacatcg
ggcacagaggttgcttcgggttcaggggatggctcttccacagctgcctcctcccgccaa
cagctccgtcagcggatcacgcgagtcaacctcagggactttatcttctgcctggagcag
gagagggccacatccaggtccttattgctttataaagctctcctgaagtag
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