Oncorhynchus masou masou (cherry salmon): 135509082
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Entry
135509082 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135509082
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135509082
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
135509082
NCBI-ProteinID:
XP_064785474
LinkDB
All DBs
Position
22:complement(16023609..16065035)
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AA seq
1785 aa
AA seq
DB search
MLIIQIATLLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSSNSTCGLHKPEP
FCIVSHLQEEKKCFVCDSTDVYVKSVVNATTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESAFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDVVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGV
CNECQHNTMGHNCEQCKPFYFQHPERDIRHPSICEPCNCDPVGSLNGGICDRMTDVSSGL
IAGQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGVCYCK
RLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGIGFVNVPEGAYLEFSID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YAVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSEGGD
XGPSSAWDTFQRYRCLENSQSVVKTPSTDICRDFIFSVSALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHVFCHEATGQCACIH
GVYSRQCDHCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLDCREQTTGHNCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFAGGCYHGLDSHYQVFCICNPGYRGSRCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGRGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPAVGDCQCDLGSGQCQCLPNVVGQHCDQCAPNTWNMASKRGCE
SCDCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQ
QCNKANGQCVCLEGVSGPRCNLCARGSSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVN
KVNTIKASGITGPYKHAIDNMEQSARSIRTILAQNLATQPLSEIQQLLEQATDLMEEMSN
KLKLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVT
KYYQQSLAAGAQANASTTDPGNPVESSFILRQATEDKMNDTRDEFHRRQEEHSKRLDDLA
DQLETLDLSELNEKTCGSPAGEACADSPCGGLSCVDSEGNRRCGGEGCNGLVTLANNAWH
KAKDFDQEIVTAMEEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNETKQRVDQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILN
QSADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDIKG
TNDLLSSVESETADSEFKLNNATQRLLWLEKDITLLREKAQNTSLSSEQTERDAESINKV
AEQVKKDLESELKDKYSTVQDLIKQEAGGVANAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgttgataattcaaattgcgaccctgctatccgcaggggcgtgcgtccttgcccaggta
ccggagttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctcctccaactccacatgcggcctccacaagcccgagccg
ttctgtatcgtcagtcatttacaggaagaaaagaaatgctttgtgtgtgactccaccgac
gtctatgtcaaaagcgtagttaacgccaccaccggccaccgggtggagaatgtcgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaag
accttccggcctgctgccatggtgattgagcggtcggccgactttgggaagaactggcag
gtgtaccgctacttcgcctacgactgtgagtcagcattccctgccatatcctcggggccc
atgcagaaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgaca
gagggagaagtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctaagggtgaagttcaccaagctgcac
acactgggagacaacctgttggactcccgtatggagatcaaggagaagtactactatgct
gtctacgacttggtggtacggggtaactgcttctgctacggacatgcctccgagtgcgcg
cccgtcgatggggctggggatgttgttgagggaatggtccatggccactgtatgtgcaat
cacaacaccatggggctgaactgtgagaagtgtcaggacttctaccatgacctgccctgg
agaccagccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtctccacgggtaacgtgagcggtggtgtg
tgtaatgagtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtcaccccagtatctgtgaaccgtgtaactgtgat
ccggtgggctctctgaacggtgggatctgtgacaggatgactgatgtgtcgtctggactg
atcgctggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaa
caggcccactacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgcc
ctggggacagttcctggagggagcccatgtgacacagactcaggagtctgttactgcaaa
cgcctggtcaccgggagggactgtgaccaatgtatgcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgt
tcccaggagactggtcagtgtgtgtgtcgagaacacatgttcggccggcgctgtgaccag
gtggagtcaggcttctacttcatcgccctggaccactacacctacgaggcagaggatgcc
aaatttggacctggtgtgacagtagtgcagagaccccaccctcaggaccgtagccccacc
tggacagggataggtttcgtcaatgttcccgagggggcctacctggagttctccatcgac
aacatcccccactccatggagtacgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacggtgatgcggcccagtgtgatttcagctgacagtcgc
tgtgccaacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgcagtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctg
agtctgcccctctactccgcactcagtgacgtccagtccccatatacactcatcgactcg
attgtgctgatgccccactgtaagaacctggagatcttcactggctctgagggcggtgac
nttggccccagcagtgcctgggataccttccagcgctaccgctgtctggagaacagtcag
agcgtagtgaagaccccgtccacagatatctgccgtgacttcatcttcagcgtatccgct
ctgctgcaccagggagctaaagcatgccagtgtgacccgcagggctctctcagcacggtg
tgtgatgccagcggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgac
aaatgttcccctgccacctacctgtttggacccagtggctgcagatcctgtgattgcaat
ccccagggatcagagcatgtattctgccatgaggctactggccagtgtgcttgtatccac
ggggtgtacagccgtcagtgtgaccactgtttgccgggacactggggcttccccaactgt
cgcccctgcacctgcaatggccacactgagcagtgtgacccctactctggagaatgcctg
gactgccgagaacagaccaccgggcacaactgtgagaggtgtctggaaggttactacggc
gaccctgtcctgggttcaggggaccactgtcgtccctgcatgtgtccggacgggccaggt
agcgggcggcagtttgccggtggatgttaccacggtctggactctcactaccaggtgttt
tgtatctgcaaccctggatacagaggttccagatgtgaggagtgtgccccaggttactat
ggaaatccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacgggtgaatgtctcaaatgtctctaccac
accgagggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcggtg
ggcgactgccaatgtgatctgggcagcgggcagtgccagtgtctgccaaatgtggtgggt
cagcactgtgaccagtgtgcccccaacacctggaacatggccagcaagaggggctgcgaa
tcttgcgactgtgaccccaaccactcatttggaacatcttgcaacgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagctgttctgg
ggagaccctgaagtcaaatgcaatgcatgcgactgtgacccacaaggcattgccgagcag
cagtgcaacaaggccaacggtcaatgtgtgtgcttggagggcgtgtctggtccccgctgt
aatctctgcgcccggggctcctctggcaccttcccctactgcgaacgctgccaccagtgc
ttcgccgactgggatgtgatcgtaggtcagctgaccaaccagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaccatacaaacacgccatagataac
atggagcagagcgccaggtccataagaactatcctggcccagaacctggctacacagcca
ctgtcagagatacagcagctactggagcaagccacagatctaatggaagagatgagcaac
aagctgaaactcactgaggaggcgttggcccaagtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctg
ctggaccaagtggagctcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactaccagcagtctctggctgctggggcccaggccaacgcctccaccaccgaccca
ggcaacccggtggagagctctttcattctacgccaagctacggaggacaagatgaacgac
accagggacgagttccataggaggcaggaagaacactccaagagactggatgacctggcg
gatcagctggagacattggacctatcagaactcaacgagaagacgtgcggcagcccagct
ggtgaggcgtgtgcagactctccatgcgggggtctgagttgtgtggactctgaggggaac
aggaggtgtgggggtgaggggtgtaacggtctggtcaccctggccaacaatgcctggcat
aaggccaaggactttgaccaggagatcgtcacggccatggaggaggtggacaagctctcc
aagatggtgtcagaggccaaggtgaaggcagacgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaacgagaccaagcagcgcgtggaccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcagacatggagagcatcgag
gcagtggccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagagagagggtgcgagacctggcccaagtggagactatcctcaac
cagagtgctgacgatgtgcagagagccgagaacctactgaagcaggcaggcagagccagt
aaagaggccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcagccgaggccatcaaacaggctaccactgacattaaaggc
acaaacgacctcctgtcctcagtggagtcggagacagcagactcagagttcaagctgaac
aacgccacccagaggctgctgtggttagagaaagacatcacactgctcagagagaaggca
cagaacacctcgcttagctctgaacaaaccgagagagatgcagagagcatcaacaaagtg
gctgagcaggtcaaaaaggacctggagtcggagctgaaggataagtacagcaccgtgcag
gacctgatcaaacaggaggccgggggcgtggccaatgccaagaagagggcggagcttcta
cagcaggaagccacagaccttctgctacaggccagtgacaaattacagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtgaaagagctgctgcaggagatcagtcacaaagtcactgtgtac
agcacctgtctgttttaa
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integrated database retrieval system
