Oncorhynchus masou masou (cherry salmon): 135509102
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Entry
135509102 CDS
T10723
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135509102 (ppfibp2b)
Membrane trafficking [BR:
omm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135509102 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
SAM_PNT
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
135509102
NCBI-ProteinID:
XP_064785510
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All DBs
Position
22:17357050..17454675
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AA seq
1031 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERNTLRAQVPSSTAHMLMDWLDMDRGSDRGSVNLRSPVNNESYQERLIHLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHHHKLNSTEEMLQQELLSRNSLETQKLDLMD
EVSYLKLKLVGMDEKQNHNDSSKDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EAQGESGAREAHNQSPDVGLGGTDMEEFCCCCGGQNGLLQELRLLKSKVDVLEGEKLQYE
RQLKATKVEIADLQQILASKDSEIEGLQSQLVSRGPMSNENPERVEVFRRLLTDQYQEFQ
RLKMGMESLLAANDEKDRHIEELTVLLRQYRKMKEVMALAQVTSEKLLVGSSEEELSGSL
KMRALTHKAHSDIIHSEMSSRCSSPLLRSSSSFQKELNSSIQTSLETSMVMVSPSDAGCF
HNGQWSQPQMLSSSLEELQSRSLPKHVVGQPVEALSENRHMEMNKYQTLPGKLSRPDMNG
DQEQYATPVQLSPDDSEDSELNLRKSERLDESTQSDLSPLSSGVDSGKQSPVSPENKKNH
LGIKKLWGKIRRTQSGTLQREDLEPGEFKRGGLRATASPRLARTGETLTSVWDLKTPFSK
WTPEQVCCWLEESGLDQYVILAQHWANSGQTLLSASPQDLEKEMGIKNPLHRKKLQLALK
SFSTKRTEKSSELDHIWVTRWLDDIGLPQYKGQFHEGRVDGRMIQYLTVTCFPQNDLLFL
KVTSQLHHLSVKCAIHVLHVNKFNPHCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDL
AEYAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNMLVGSQAQQE
KREFMESLGYAPLSTTAKVRPKKLGFSNFGHLRKKRCDESTDYICPLEVAQVQAVLNGAH
RPYSGFRGLSPILDRDPDRRQQMAVTEGPVLQIEALSEGINQLTGSREERGAGAVPDIKG
RPILVIRETTL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatc
gcaggctccaaggctgcagccgagtacaccaacggcctgtttgagctgggctctccaggt
agcgcagggcccctgcaggttctacagctggttgaggacctgaggctggccctagagctg
cagcccagagaggaggagaggaacaccctgagggcccaggtccccagcagcactgctcac
atgctcatggactggctggacatggacaggggctcagacaggggctcggttaaccttcgc
tccccggtgaacaatgagagctatcaggagcgtctgattcacctagaaggggacaaagag
tctctggttctccaggtgagcgtgctcacagaccaggtggaggcccaaggagagaagatc
cgagacctggagagctctctggaggagcaccaccacaaactcaactccactgaggaaatg
ctacagcaggagctgctgagccgaaactcgttggagacccagaaactagatctgatggat
gaggtttcctacctgaaactgaagctggtcggcatggacgagaaacagaaccacaacgac
agcagcaaggaccagcagaacaaagctgagtgtgtggtaaatctgataagcgagctccag
gagcagatgtgtaggtttcaggaagagatccacacccgcatcatggagaaacgggccatg
gaggcccagggggagagtggtgcccgcgaggcccacaaccagagccctgacgtgggcttg
ggtggcactgacatggaggagttttgctgttgctgtggaggacagaatggcttactgcaa
gaactcaggctcctcaagagtaaagtggatgtgctggagggggagaaattgcagtatgag
agacaactaaaggccacgaaggtggagatagcagacttacagcagatactggcttccaaa
gactctgagatcgagggccttcagagccagctggtctccagaggcccaatgtccaatgag
aatccagagagagtggaggtctttaggagactgctgacagaccaataccaagaattccag
aggttgaaaatggggatggagtcgttgttagcggcaaatgatgagaaagaccgtcacata
gaggagctcactgttctcctgagacagtacaggaagatgaaggaggtgatggccctcgca
caagtgaccagtgagaagctccttgttgggagcagtgaggaggaactgagtgggagtctg
aagatgagagctctcacacataaagctcattcagacatcatccattcagagatgtcttcc
aggtgctcctctcctctgttaaggtcttcctcatccttccagaaagagctgaactctagt
atccagacctccctggagacgtccatggtgatggtctccccgagcgatgctggctgcttc
cacaacggacaatggtcccaaccacagatgctttcaagcagcctggaggagttacaaagc
agatcgttaccaaagcatgtagtgggtcaaccagttgaagcgctttcagagaatcggcac
atggaaatgaacaaatatcagaccctaccagggaagctatctcgacctgacatgaatggg
gatcaagagcagtatgccacaccagtccagctgtcccctgacgatagcgaggacagtgag
ttgaacctaagaaagtcggagagactggatgagtccacgcagtcggacctgtcccccctg
tcgtctggagtggactcaggaaagcagtctcctgtctccccagagaacaagaagaaccac
ctgggcatcaagaaactctggggaaagattcggaggacccagtctggcaccctgcagaga
gaggaccttgagcctggagagtttaagagggggggactgagagccaccgccagccctcgt
ctggcccggactggagagacattgacctctgtgtgggatttgaagacacccttctccaag
tggactccggagcaggtctgttgctggctagaggagagtgggctggaccagtatgtgatt
ctggcccaacattgggccaacagtgggcagaccctcctctctgcctcaccacaggactta
gagaaggaaatggggattaagaatccactgcacaggaagaagttacagttggccctcaag
tccttcagcaccaaaaggactgagaaatcctctgaactggaccacatctgggtcacacgt
tggcttgatgacattggtttacctcaatacaagggtcagtttcacgagggaagagtagac
ggcagaatgattcagtacttgacagtgacttgtttccctcagaatgacctcttgttcctg
aaagtgaccagtcagctccatcacctcagtgtgaagtgtgctatccacgtcctccacgtc
aacaagttcaacccccactgcctgaagagaaggcctggagatgagaacaagacttctccc
tcggaggtggttcagtggtcgaaccacagggtgatggagtggcttcgctcagtggacctg
gcggaatacgcacccaacttgaggggcagtggggtgcacgggggcctcatcattctggag
cctcgttttaactcagataccctggccatgctgctgaacatcccccctcagaagaccctg
ctgcgacgtcacctggccaccaacttcaacatgctggtgggctcccaggctcagcaggag
aagagggagttcatggagtctttaggctacgctccgctcagcaccacagccaaagtcagg
ccaaagaagttgggcttctcaaacttcggccacctgaggaagaagaggtgtgacgagtca
acagactacatttgccccctggaggtggcccaggttcaggcggtgctgaacggggcacac
cggccctactccggcttcaggggcctcagccccatcctagacagagacccagacagacgg
cagcagatggcggtgacagaggggcctgtgctgcagatagaagctctgtctgagggaatt
aaccaactcacgggttccagagaggagagaggggctggagctgttccagacatcaaaggc
agacccatactggttataagggaaaccaccctctga
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