Oncorhynchus masou masou (cherry salmon): 135509182
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Entry
135509182 CDS
T10723
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03020
RNA polymerase
omm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135509182
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
135509182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135509182
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135509182
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
135509182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
135509182
NCBI-ProteinID:
XP_064785690
LinkDB
All DBs
Position
22:22007478..22056960
Genome browser
AA seq
1132 aa
AA seq
DB search
MEILGEEFGDMTHQQLAAPVNTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTSMEYSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNALSEDAPIAIIF
KAMGVESDQEIVQMIGTEEHVMANFSPSLEECQKAQIFTEIQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGENKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKISDQIIPKQRAAQFDIVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIVKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHQRLVYTFRLMRRAGFINEFVSISTNLTDRCVYVSSDGGRLCRPYIIVKK
GQPMVKNKHIEELTQGYRTFEDFLHESLVEYLDVNEENDCQIALYEHMIYKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLGYPQKPMVK
TRTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHSILDADGICCPGEKVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPVGYKGSTDSYIEKVMISSNADDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVMDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPIEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccttggagaggagtttggagatatgactcaccagcagctcgcggctcctgtc
aatactatagaggaaaaatggaaactattgccagcttttttgaaggtgaaaggtctggtg
aaacagcacattgactccttcaactacttcatcaatgtggagataaagaagataatgaaa
gcaaatgaaaagatcacaagtgatgctgatcccatgtggtacctaaagtacctcaatata
tacgttggcatgcctgatgttgaagagagcttcaatgtaaccagaccagtatctccacat
gagtgtcgtctcagggacatgacttactctgcacccatcactgtggacatcgagtacacc
cgtggcagtcagagaatcatccgcaatgctctacccatcggaaggatgcccatcatgctg
cgcagctctaactgtgtcctcacggggaagacgtccatggagtactccaaactcaacgag
tgccctctggacccagggggctatttcattgtcaaaggtcaggagaaggtcattctgatc
caggagcagctgtcaaagaaccgcatcattgtggagcaggacaggaagggggcagtagga
gcctctgtgaccagttccacccatgagaagaagagcaggaccaatatgatcgttaagcag
ggacgcttctacttaagacacaacgcactctcagaggatgcccccattgccattatattc
aaggctatgggtgtggagagtgaccaggagatagtgcagatgattgggacagaggagcac
gtcatggctaacttctcccccagcctggaagagtgccagaaagcccagatcttcactgag
atacaggctctgaaatacattgggaataaggtgcggagacagcgcatgtggggagggccc
aagaagaccaagatggaggaggccagagagctgttggcttccctcatcctcactcatgta
cctgtgaaggagtttaacttccgggccaagtgtatctacctagcggtgatggtgcgcagg
gtgatcctagcccaaggggagaacaaggtggatgacagagactactatggcaacaagcgc
ctggagttggctggacagctgctgtctctgctgtttgaggatctctttaagaagttcaac
tccgagctgaagaaaatctcagaccagatcatccccaagcagcgggcggcacagtttgac
attgtcaaacacatgcgccaggaccagatcaccaacggcatggtcaacgccatctccacc
gggaactggtccctgaaaaggtttaagatggaccgtcagggtgtgacccaggtgctgtcc
cgtctctccttcatctctgctctgggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcgggccccgctccctgcagccctcccagtggggcatgctgtgcccc
tccgacacccctgagggagaggcctgtggtctggtgaagaacctggccctgatgacccac
atcaccacagacatggaggacggccccatcgtcaagctggccttcaacctgggagtggag
gatgtcaacctgctgtgtggagaggagctctcctacccaagtgtcttcctggtcttcctc
aatggtaacatcctgggggtgatccgggaccaccaaaggctggtgtacaccttcagactg
atgcgacgggctggattcatcaacgagtttgtgtccatctccaccaacctaaccgaccgc
tgtgtctacgtctcctcagatggaggacgcctctgcagaccgtatatcattgtgaagaaa
ggacagccaatggttaagaacaaacacatcgaggagttgacccagggatacagaaccttt
gaggatttcctccatgagagcctggtggagtacctggacgtgaacgaggagaatgactgt
cagatcgccctctatgagcacatgatttataaggatactacacacttggagattgagccc
ttcacactactaggggtctgtgctggtctgatcccctaccctcatcacaatcagtccccc
aggaacacataccagtgtgctatgggcaagcaggccatgggtacgattggctataaccag
aggaaccgtatagacactctgatgtacctgctgggctaccctcagaagcccatggtcaag
actagaaccatagagctgatagactttgagaaactgcctgcgggccagaacgccaccgtg
gctgtgatgagctacagcggctacgacatagaggacgctctgatcctcaacaaggcctct
ctagacagaggatttggaagatgcctggtctacaagaacgctaagtgcacgttgaggcgc
tacaccaaccagacctttgacaaggtgatgggtcccatgctggatgctgccacacgcaag
cccatctggaggcacagtatcctggatgctgacggcatctgctgccctggtgagaaggtg
gagaataagcaggtgctggtgaacaaatccatgcccactgtcacccagacaccactggag
ggcagtgcccagccaggacagccccagtacagagatgtgcccgtcggttacaagggctcc
acagactcctacatcgagaaggtgatgatctcctccaacgcagacgatgctttcctcatc
aagatcctgctgagacagaccaggagaccagagataggagacaagttcagcagtcggcac
ggacagaaaggtgtatgtggccttatagttcctcaggaggacatgcccttctgtgactcg
ggcatctgccctgatatcatcatgaacccgcatggctacccctccagaatgacggtgggg
aagctgattgagctgctggctggtaaagcgggggtgatggacgggaggttccactacggc
acggccttcgggggcagcaaggtaaaggacgtgtgcgaggacctgatccgctatgggtac
aactaccagggcaaggattacgtcacctcgggcatcactggagagccaattgaggcctat
atctactttgggcctgtgtattatcagaaactaaagcacatggtactggacaagatgcac
gccagagcccgcggcccccgagctgtgctcaccagacagcccacggaggggcgctctaga
gacggaggcctacgtctgggagagatggaacgtgactgtctgattggctacggggccagc
atgttgctgctggagcgcctcatgatctccagtgacgccttcgaggtggacgtgtgcggt
cagtgtggcctgctgggatactccgggtggtgccactactgtaagtcctcctgtcacgtg
tcctcgttacggataccctacgcctgcaaactgctctttcaggagctgcagtccatgaac
atcattccccgcctcaaactggcacgctacaacgagtaa
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