Oncorhynchus masou masou (cherry salmon): 135509238
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Entry
135509238 CDS
T10723
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135509238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135509238
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
NGL family
135509238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Sp38
FlK
Ig_6
DUF4293
Syndecan
CMV_1a
Motif
Other DBs
NCBI-GeneID:
135509238
NCBI-ProteinID:
XP_064785798
LinkDB
All DBs
Position
22:complement(25251796..25355314)
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AA seq
645 aa
AA seq
DB search
MLNKMTSSWQQQTMRGPRWNRVLSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRTTVGHNVGPTP
SAGSWETVSSTSTTTTTARTPLSTRVTEKTFTIPVTDLNGGSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLTLPPLEH
EHLNHYNTYKTAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaaatgacctcttcttggcagcagcagacgatgagaggtcctaggtggaac
cgggtcctgtccgaccctttgttcgtgctgcttttggccctccagctcctggcggtggcg
ggcctggtgcgtgcgcagacctgcccatccgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccggcggggactacgtgatgtcccagacggcatctccaccaacacacga
tatctgaaccttcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctccagctcagcaagaaccacatccgcaacattgagattggggca
ttcaacggcctggctagtctcaacaccctggagctgttcgacaaccgcctcaccacaatc
cccaatggggcctttgagtacctctccaaactcaaggagctgtggctgaggaacaaccca
atcgagagcattccctcgtatgcgttcaacagggtgccctcactacggaggctggactta
ggggaactgaaacgcctctcgtatatctcagagggagctttcgagggactcagcaacctg
cgctacttgaacctgggcatgtgcaatctcaaggagattcccaacctcatacccctggtc
aagctggatgagctagagatgtcagggaaccagctgacggtcatcagacccggctccttc
aaagggctgatccacctgcagaagctgtggatgatgcacgcccagatccagaccattgag
aggaactcctttgatgacctgcagtcgcttgtggagctcaacctggcccacaacaacctc
actctgctgccccatgatctcttcacccccctgcaccacctggagagagtccacctccac
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgcgcccgctgcagttccccagcaagccacaaggggcgc
tacatcggtgagctggatcagaactatttccattgttatgcaccggttatcgtagagcct
ccggctgacctgaatgtgacagagggcatggcagcggagctgaagtgcagggccagttct
ctgacctcagtcagttggattacacccaacggctccattatgacccacggtgcatacaag
atccgcatttccgtgctaaacgatggcactctcaacttcaccaacgtcaccatgcaggac
acaggcacctacacctgcatggtgagcaactcagccggcaataccacagcatctgccacg
ctcaacgtgtcatccacagagaacgtcctcagctactttaccacagtgacagtggagacc
atagagccagtgcatgacgaagggcgcaccacagttgggcataatgtgggccctaccccc
tctgccggctcctgggagaccgtctcatccacctctaccaccaccaccacggcccggaca
cccctctccacccgggtcacagagaagacctttaccatccccgtcacagacctgaacggt
ggctcaatgaccggcctggacgaggtgatgaagaccaccaagatcatcataggctgcttt
gtggccatcaccctcatggccgctgtcatgctcatcatcttctacaagatgagaaagcag
caccaccagcagaatcaccatgcaccccagcgcaccatcgagatcatcaacgtggacgag
gactgtgtgacgggcgggccggccatggagggccacctgactcttcccccgcttgagcat
gagcacctcaaccattacaacacctataagactgcgtacaaccacgtctccaccatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagctcgaaagacaatgta
caagagacccagatctaa
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