Oncorhynchus masou masou (cherry salmon): 135509247
Help
Entry
135509247 CDS
T10723
Name
(RefSeq) interferon regulatory factor 8-like
KO
K09447
interferon regulatory factor 7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04620
Toll-like receptor signaling pathway
omm04621
NOD-like receptor signaling pathway
omm04622
RIG-I-like receptor signaling pathway
omm04623
Cytosolic DNA-sensing pathway
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135509247
04621 NOD-like receptor signaling pathway
135509247
04622 RIG-I-like receptor signaling pathway
135509247
04623 Cytosolic DNA-sensing pathway
135509247
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135509247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135509247
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135509247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
OYE-like_second_a-b
Motif
Other DBs
NCBI-GeneID:
135509247
NCBI-ProteinID:
XP_064785814
LinkDB
All DBs
Position
22:26840928..26845760
Genome browser
AA seq
455 aa
AA seq
DB search
MTEVRGSALKMQSRNPKPQFADWLIEQVWTGQYAGLCFVDNNKFRVPWKHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVEDYDIDIHSSLTSTGYTPPGMEHDNLLKLVNTIDLNQHTEEWAET
YIHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPVPVPAQQAYDHGNQDALLNLPAAQPSL
CDLEITISYRRREMLKTQVSGPIVQLHYQCDVPEPNAQTLCFPSTDGLLDHKQIEYTNCI
LGSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMT
ELIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEMAQGEGASSL
QNDNISLQISHHNSLMELISATWPDGPEHTMGQYF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagtacgtggctcagcattaaagatgcaaagccgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtgttttgtggac
aacaacaagttcagagtcccgtggaaacacatctctaggaaggactgctgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaagcgtttcatg
atggtggaagaccactccaaggactcagacgatccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggaggactatgacatt
gacatccacagctctctcacctctacaggctacacccccccaggcatggagcatgataat
ctactcaagcttgtgaacaccatagacctgaaccaacatactgaggagtgggcagagacc
tatatacacacacaccacccagtggtaccagaagactgctaccccttccagcctctaaca
gagccccagccagtctcccagaaccactcaccaccaccagtcccagtaccagcacagcag
gcatacgaccacgggaaccaggatgccctgctcaacctgcctgctgcccagccgtctctc
tgtgacctggagatcaccatctcctacaggaggagagagatgctgaagacccaggtgtca
ggccccattgttcagctccactaccagtgtgatgtccctgagcccaacgcccagaccctc
tgcttcccgagcactgacggcctgctagaccacaaacagattgaatacaccaactgcatc
ctagggagtgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttac
cggcaggacaaatgccatgtgttctctagtactagtgaccccagagaggcacaccctgaa
cccaggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgact
gagctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgc
tttggtgagaagttcccagacggaaaacccctggagaagaaacttatcattgtcaaggtg
gttcccttgatctgtcgtcacttccacgagatggcccagggggagggggcatcttccctc
cagaacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagt
gccacctggcccgacggcccagagcacaccatggggcaatacttctag
DBGET
integrated database retrieval system
