Oncorhynchus masou masou (cherry salmon): 135509283
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Entry
135509283 CDS
T10723
Symbol
prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135509283 (prpf18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135509283 (prpf18)
Spliceosome [BR:
omm03041
]
Complex C
Other components
Step II factors
135509283 (prpf18)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
135509283
NCBI-ProteinID:
XP_064785873
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All DBs
Position
22:28514231..28525951
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AA seq
352 aa
AA seq
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MDFLKAEIVRKRKLIEDKDLINDSKKYFKRADLARKEEDEYFERCGYKVQKEAPERQMEK
KEEKADPSTSSNSTLELELTEEKLPMSLSRQEVIRRLRERGEPVRLFAESDYEAFQRLRK
IEILAPEVNKGLRNDLKAAMDKIDAQYLNEIVGGTGEPGEVDTQFDLRVHEADTTIEELE
ALGKSLGTGDDNGDQDVIDKVLRFLLGVWAKDLNGREDHVKRSVQGKLASATQKQTESYL
KPLFRKLRKKSLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHA
RTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFSTDPSKCVEYNAL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttaaaagctgaaatcgtgaggaagagaaaactaattgaagacaaagatctt
attaatgattcaaagaaatacttcaaacgagccgatcttgcccgaaaagaagaagatgag
tatttcgaaagatgtggctacaaggttcagaaagaggcacctgagagacagatggagaag
aaagaggagaaagcagatccctctacctcatccaatagcactttagagttggagctgact
gaggagaagctgccaatgtcgctctctcggcaggaggtgatccggcggctgagggagcga
ggggaaccggtgcgtctgtttgcagagtcagactacgaggccttccagaggctcaggaag
attgagattctcgctccggaagtcaacaagggtttgaggaacgacctgaaggcagccatg
gataagattgatgcacagtacctgaatgagatcgtagggggcactggggagccgggtgag
gtggacacacaattcgacctaagagtacacgaggcagacacaaccatcgaggagctggag
gccctgggtaaatctctgggaacgggagatgacaatggggaccaggatgtcatcgacaaa
gtccttaggttcctgctgggagtctgggcgaaggacctgaatggtcgagaggaccacgtg
aagcgcagcgtccagggcaagctggccagcgccacccagaaacagactgagtcctacctc
aaacctctattccggaaactacgcaagaagagtttgccagcagacatcaaagaatcaatc
acagacatcattaaattcatgctgcagagagaatatgtaaaggcgaacgatgcatacctg
cagatggccattggtaatgccccctggcccatcggggtgaccatggtgggcatccacgcc
cgtacggggcgagagaagatcttctccaaacacgtggcccacgtcctcaacgatgagacc
cagagaaaatacatccagggactaaaaaggttgatgactatctgccagaaacacttctcc
acagacccctcaaagtgcgtggagtacaatgccctgtag
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