Oncorhynchus masou masou (cherry salmon): 135509399
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Entry
135509399 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135509399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135509399
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135509399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
135509399
NCBI-ProteinID:
XP_064786106
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All DBs
Position
22:35865036..35897661
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AA seq
820 aa
AA seq
DB search
MEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDIEPSFVSDAGVPGRSALDS
VEVAYGRQIYIFNEKIVNGHVQPNLGDLCASVADSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTALDMQMAFVTQALQFLQNSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKLRLHYRRVLRNCADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKNNQGENMFMCCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAAQSN
KERLKNTAVAIAERYRTQGVAGEKSADSTFYLLLDLMTFFDEYHAGNIDRAYDVMERLKL
VPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQCKRLKGAAAGTPGRPQRSME
DRDSQLRSQARALITFAGIIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagggctttggagaactcctgcagcaggcagagcagcttgcagcagagact
gaggccgtgtctgagcttcctcatgttgagaggaaccttcaggagatccagcaggctgga
gagaggctacgctcccgcaccttaactcgaacatcacaagacgctgctgacgtgaaagcg
tccatcctccttgggtccagaggcctggacatcttccacatctcccagcgtctggagagc
ctgagtgctgccaccacctttgaacctctagagccagtgaaggacacggacatccagggc
tttctgaagaatgagagggacaatgcactgctctctgccatcgaggagtcacgtcgcagg
acgttcctcttggcagaggagtaccaccgcgagtccatgctggttcagtgggagcaggtg
aagcagagagtactgcacaccctgttgggagcaggggaagatgctctggacttcagccaa
gacatagagcccagctttgtgagtgacgcaggagttcctggacggagtgctcttgacagc
gtggaggtggcctatggacgacagatctacatttttaatgagaagatagtgaatggacat
gtccagcccaacctgggagacctctgtgcctccgtggcagacagcctggatgacaagaat
gtgtcggacatgtggttaatggtgaagcagatgacagacgtgctgctggtcccagccaaa
gacacgctgaagagccgcacggccttggacatgcagatggctttcgtcacgcaggccctg
cagttcctgcagaacagctataagaactacaccatggtgacggtgtttgggaacctgcac
caggcccagctaggaggagtccctggcacctatcagctggtgcgcagcttcctcaacatc
aaactgccagggcctctgccaggcatgcaggatggtgaggtggagggtcacccagtctgg
gctctgatctactactgcctgcgctgtggggacctgggggctgccatgcaggtggtgaac
cgggctcagcaccagctgggagacttcaagacctggttccaggagtacatgaacagccct
gacagacgcctggcccccgccacagagaacaagctgcgtctccactaccgcagagtgctg
aggaactgtgctgacccctacaagagggccgtctactgcctcatcgggaagtgtgacatc
gcagacaaccatggagaggtggccgacaagaccgaggactacctgtggcttaagctcaac
caggtgtgcttcgatgacgacggcagcagtgctcctcaggatagactgacattggcccag
ctacagaaacagcttctagaggactacggagagtcccacttctcagccagccaacagccg
ttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgctgtggccttcctg
ttccgggtagagcgtctacgcagtcatgcagttcacgtggctctggttctctacgagcta
cggctgctgctcaagtcatcagggcagagcgcacaactgttgagtcaggaagctggggac
ccccctatggtgcgtcggttaaacttcatccggctgctcatgctctacacgcgcaagttt
gagtccacagacccccgggaggctctacagtacttctacttcctacggaatgaaaaaaac
aaccaaggagagaacatgttcatgtgctgtgttagcgagctggtgattgagagtcgagag
tttgacatgcttctaggaagactggaaaaagatggcagcagaaagcctggagtgattgat
aaatttgccggagacactcgagccattatcacaaaagtggcgctggaggctgagaacaag
ggcttgtttgaggaagcagtaagactgtatgagctggccaagaatccagacaaggtctta
gagctgatgaacaggctgctgagtcctgttatcgcccaagtcagcgctgcccagtccaac
aaggaaagactgaagaacactgctgttgccatcgctgagcggtaccggacccagggtgtt
gctggagagaagtctgcagacagcaccttctacctgctgctggacctcatgaccttcttt
gatgagtaccatgctggaaacatagaccgggcctacgatgtgatggagagactgaagctg
gtccctctgagtcaagacagtgtggaggaaagggttgctgcatttcgcaatttcagtgat
gaggtcaggcataatctgtcggaggtactcctggccaccatgaatatcctgttcacgcag
tgcaagcgcctgaagggggccgcagcaggaacccctggtcgaccacagaggtccatggag
gacagagactcgcagctgcgcagccaagcccgtgcactgatcacgtttgctgggattatc
ccgtaccgcatggcaggcgacaccaatgcccggctggtgcagatggaggtcctgatgaac
tga
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