Oncorhynchus masou masou (cherry salmon): 135509419
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Entry
135509419 CDS
T10723
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04115
p53 signaling pathway
omm04120
Ubiquitin mediated proteolysis
omm04137
Mitophagy - animal
omm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135509419 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135509419 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135509419 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
135509419 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135509419 (siah1)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135509419 (siah1)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
135509419 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
135509419
NCBI-ProteinID:
XP_064786134
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All DBs
Position
22:complement(36225175..36248669)
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AA seq
335 aa
AA seq
DB search
MSGRADVQPMNSWKGVLKLFTCIASRTTANKPKELPIFQEKKKALFGNLMDEEMSRQTAT
ALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctgatgttcagcccatgaactcatggaagggggtgctcaagctcttc
acatgcatagcttctagaacaactgccaacaaacctaaagagttacccatttttcaagag
aagaagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccaca
gcgctgcccacaggaacctccaagtgcgccccctcccagcgcgtccccaccttgtctggc
actacggcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactat
gtgctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccggccc
aagctcacctgctgccccacctgccggggcccgctgggctccatcaggaacctggccatg
gagaaggtggccaactctgtgctgttcccctgcaagtatgcgtcgtcgggctgtgaggtg
acgctgccccacacagacaaggcggagcacgaggagctgtgtgagttccggccatactcc
tgcccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtcatgccccac
ctcatgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttccttgcc
acggacattaacctgcctggggcagtggactgggtcatgatgcaatcctgcttcggattc
cacttcatgctggtcctggagaagcaggagaagtacgacggtcaccagcagttctttgcc
attgtgcagctgatcggcacgcggaagcaggcagaaaactttgcctaccgcctggagctc
aacgggcaccggcgacggctcacctgggaggccacgccccgctccatccatgagggcatc
gccactgccattatgaacagcgactgcctagtgtttgacacctccatcgcgcagctgttc
gctgagaacggaaacctgggcatcaacgtcaccatatccatgtgctga
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