Oncorhynchus masou masou (cherry salmon): 135509499
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Entry
135509499 CDS
T10723
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04150
mTOR signaling pathway
omm04310
Wnt signaling pathway
Brite
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
135509499
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135509499
NCBI-ProteinID:
XP_064786291
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Position
22:40568786..40633035
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AA seq
1624 aa
AA seq
DB search
MELKPRPLAMDVLLVELLFYSSLLSLVRGSPLLLFANRRDVRLVEVGRPESAVVVSDLED
AAAVDFLYSEGLIFWTDVSEEAIKQTYYNQSTHSVKEAMGTGQTVVVSGLDSPDGLACDW
LGRKLYWTDSETNRIEVANLDGTSRKVLFWLDLDQPRAIALNPAHRYMYWTDWGEEPRIE
RAGMDGSNRKIIVEVDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSSRETVVEGTL
THPFALTLSEETLYWTDWQTRSIHACNKHTGDKRREILSGIYSPMDIQVLGPDRQPDIQT
PCSVDNGGCSHLCLLSPMQPFYSCACPTGVKLKEDGKTCRPGAEQVLLLARRTDLRRISL
DLPDFTDIVLQVDDIRHAIAIDYDPVDGYVYWTDDEVKAIRRSRIDGTEAQTLVTTEINH
PDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPVNGYMYWTD
WGEKPKIERANLDGTERIVLLNTSLGWPNGLAIDYEAGKLYWGDAKTDKIEVIDVDGSNR
VTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKTDAVREIIIDQLPDLMGLKATRVT
ETSGTNGCAEDNGGCSHLCFHRPQGLRCACPMGLELLSDMRTCVVPEAFLLFTNRADIRS
ISLGTNSNDVAIPLTGVKEASALDFDVSENRIYWTDVSTKTISRAFMNGSSVEHVIEFGL
DYPEGMAVDWMGRNVYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALDPANGYMYW
TEWGGKPRIARAHMDGSNIVTLVDKVGRANGLTIDYIDQRLYWTDLDTCMIESTNMQGLQ
REIVADDLLHPFGLTQYRDYIYWTDWKLRSIERADKRSGLNRTMVQGHLEYVMDILVFHS
SRQDGANDCSQNNGNCAHLCLASPAGAQCRCASHYTLDSNSRNCSSPSSFLLFSQKASIS
RMVLGEQSPDIILPIHVLRTVRAISYDPLDHLVYWVDGRQNIRRARDDGTQSSVVVSTTS
THQQQPDKQPHDLSLDPYSRTVYWTCEATNTINLQRLDGDAVGVVLRDEHDKPRAIVVNA
EKGYMYFTTMQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRI
ESSDLTGANRIVLQDSNILQPMGLTVLGEHLYWIDRQQQMIERVDKLTGEKRTRIQGRIS
YLTSIHAVEDMDPAEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLPNLLVCGEP
PTCSTEQFTCATGDIDCIPMAWRCDGFAECDDNSDEERCPVCSAFQFQCDKGQCVDAQLR
CNGEADCTDNSDEQDCDTICLPNQFRCNNNQCILKKQQCDSYSDCADNSDELFCEFLTPS
SNDIHSSHTSTIGPVIGIILSVFVMGGMYFLCQRVVCRRYKGPNGAFPHEYISGTPHVPL
NFIAPSSSQNGTFTGKEGISCGKSIMSSVSLMGSSSSGTPLYDRNHVTGASSSSSSSAKG
AFYPQMLNPPPSPATDRSLYNADVFYSSNSPSTTRSYRPYLMRGVAPPTTPCSTDVCDSD
YTTSRWKSNKYYMDLNSDSDPYPPPPTPRSQYLSAEESCPPSPSTERSYFHLCPPPPSPC
TDSS
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagccacgaccactagcaatggacgttctccttgtggaattactgttttat
agcagcttgctctctctggttcgtggatcccccttgctgctgtttgccaaccggcgggat
gtgaggctggtggaggtggggaggccggagtcggcggtggtggtcagtgatctggaggat
gctgctgccgtggacttcctctactctgaaggactcatcttctggaccgacgtcagcgag
gaggccatcaagcaaacctactacaatcagtccacccactctgtgaaagaggccatgggg
acagggcagactgttgtcgtgtcgggcctcgactcccccgacggactggcttgtgattgg
ttgggccgtaaactatactggaccgactcggagaccaaccgcattgaagtagccaacctg
gatggcacctctcggaaagtgctcttctggttagacctggaccagccccgggccatcgcc
ctgaacccagcccaccgctatatgtactggacagactggggggaggagcctcgcatcgag
agggcggggatggacggcagcaacaggaagatcatcgtggaggtggacatctattggccg
aacggtctcaccattgacctggacgaacagaaactgtactgggccgacgccaagctgagc
ttcatccacagagctaacttggatggctcctcacgggagactgtggtggagggcaccctc
acccatccgtttgccctcaccctgtcagaggagactctgtactggacagactggcagacc
cgctccatccacgcctgcaacaaacacactggagacaagaggagggagatcctcagtgga
atttactcccccatggacatccaagtgctgggtccagacagacagccagacatccaaact
ccctgcagtgtggacaacggaggctgctcccacctgtgcctgctgtcccccatgcagcct
ttctacagctgtgcctgccccactggagtcaagctcaaggaggatgggaagacctgccgc
ccaggtgcagagcaggttctgctgctggcccggaggactgacctgaggagaatctctctg
gacctcccagacttcaccgacatcgtccttcaggtggatgacatccgccatgccatcgcc
attgactacgaccctgtggatggatacgtgtactggactgatgacgaggtcaaagccatc
cgccgctcacgtatcgacggcaccgaggcccagaccctggtcaccacggagatcaaccac
ccagatggcatcgcggtggactgggtggcccggaacctgtactggacagatactggcact
gaccgtattgaggttaccagattgaacggaacctcccggcgtattctgatctcagagaac
ttggatgaaccaagggccattgtgctggaccctgtcaatggttacatgtactggacagac
tggggggagaagcccaagatagagcgagctaacctggatggaactgagcgtatcgtgctg
ctcaatacctcgctgggttggccaaacggtttagccatcgactatgaagcaggaaagctg
tactggggcgatgccaagacggacaaaattgaggtgattgacgtggacggctccaacagg
gtgaccctgctggaggacaagcttccccacatctttggcttcacgctgctgggcgactac
atctactggacggactggcagagacggagcatcgagagggtccacaagaccgacgctgtc
cgagagatcatcatcgatcagctgcctgaccttatgggtctcaaggccaccagagtcaca
gagacctccggcacgaatggctgtgcggaagacaacggcggctgcagccacctgtgtttc
caccggccccagggcctgcgctgtgcctgtcccatgggcctggagctgctcagtgacatg
aggacatgcgtggtgcccgaggctttcctgctcttcaccaaccgggctgacatccgctcc
atctctctcggcacaaactctaacgacgtggccatccccctcaccggggtcaaggaggcc
tccgccctcgactttgacgtctccgagaacaggatctactggactgacgttagcaccaag
accatcagcagggccttcatgaacggcagctctgtggagcatgtgatagagtttggcctg
gactacccagagggcatggcagtggactggatgggcaggaacgtgtactgggccgacaca
gggaccaaccgcatcgaggtggcccggctggacggacagtaccggcaggtcctggtgtgt
aaggacctagacaaccctcgctccctggccctcgaccccgccaacggttacatgtactgg
actgagtggggaggcaagcccaggatcgccagggcccacatggacggcagcaacatagtg
accctagtggacaaagtaggcagagcaaatggcctcaccatcgactacattgaccagaga
ctgtactggacagacctggacacctgcatgatagagtcaaccaacatgcaaggtctgcag
agggagatagtggctgacgacctcctccacccgtttggtctgacccagtaccgggattat
atctactggacagactggaaactgcgcagcatcgagcgggccgacaaacgcagcggcctc
aaccgcaccatggtccagggacacctggagtacgtcatggacatcctggtcttccactcc
tcccgccaggacggtgccaacgactgctcccagaacaacggcaactgtgcccacctgtgc
ctggcgtcgcctgccggcgcccagtgccgctgtgcctcccactacactctggactccaac
agcaggaactgcagctccccctccagcttcctcctgttcagccagaaggcctccatcagc
cgcatggttctgggggagcagagccccgacatcatcctgcccatccacgtcctccgcacc
gtccgggccatcagctatgaccccctggaccacctggtctactgggtggacggacggcag
aacatcaggagggcccgcgacgacggcacacagtcatcagtggtggtgtccaccacttcc
acccaccagcagcagcctgacaagcagccccacgacctgagcctggacccctacagccgt
actgtctactggacttgtgaggccaccaacaccatcaacctccagcgcctagacggagat
gctgtgggcgtggtgctgagggacgaacacgacaaacccagagccatcgttgtcaatgca
gagaaagggtacatgtatttcaccaccatgcaggatcgctctgctaagatcgagggagca
tctctggacgggacggagcgggagtctctgttcaccacgggtctgatccggcctgtagcc
ttggccctggacaacaagctggggaaactcttctgggtggacgctgacctgaaacgcatc
gaaagcagtgacctcactggagccaatcggatcgtcctccaggactctaacatcctgcag
cccatgggtctgacggtgctgggagagcacctgtactggatcgacagacagcagcagatg
atcgagcgtgtggacaagctcacgggggagaagaggacccgcatccagggtcgcatctcc
tacctcaccagcatccacgctgtggaagacatggaccctgccgagtttgcttctcatccc
tgttcccgtgacaacggaggctgctcacacatctgcatcgccaaaggagacgggacgcct
cgctgctcctgtcccatgcacctggtcctgctgcccaacttgctcgtctgtggagagccg
cccacctgttccacagagcagttcacctgtgcgacaggcgacatcgactgcatccccatg
gcgtggcgctgtgacggcttcgccgagtgtgacgataacagtgacgaggagaggtgccca
gtctgctcggccttccagttccagtgtgacaagggccagtgtgtggatgctcagctacgc
tgcaacggagaggcagactgcactgacaactccgatgaacaggactgcgacactatctgc
ctgcccaaccagttccgctgtaacaacaaccagtgcatcctgaagaaacagcagtgtgac
tcctacagcgactgtgctgacaactctgacgagctcttctgtgaattcctcaccccctcg
tcaaacgacattcactcatctcacaccagcaccataggccctgtcattggcatcatcctg
tcagtgtttgtgatgggagggatgtactttttgtgccagcgggtcgtgtgccgccgttac
aaaggtcccaacggagccttcccccacgagtacatcagtggcaccccccacgtacccctc
aacttcatcgcccctagcagctcacagaacggaaccttcaccggtaaagaaggtatctcg
tgtgggaagtctatcatgagttctgtcagtctgatggggagcagcagtagtggaactccg
ctctacgacaggaaccatgtgacaggggcctcgtccagcagctcatccagcgccaaggga
gccttctatccacagatgctcaaccctcctccctctccagccacggatcgctccctgtat
aacgcagacgtcttctactcctctaacagtccctccaccaccaggtcttacaggccttat
ctaatgcgcggcgtggcaccccccaccaccccctgtagcactgacgtctgtgacagcgac
tacaccacaagtcgctggaagagcaacaagtactacatggaccttaactcagactctgac
ccctaccctcctccccccaccccccggagccagtacctatcagcagaggagagctgcccc
ccttctccatccacagagcgcagttactttcacctctgtcctccacccccctcaccctgc
actgactcttcatga
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integrated database retrieval system
