Oncorhynchus masou masou (cherry salmon): 135509517
Help
Entry
135509517 CDS
T10723
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135509517
Enzymes [BR:
omm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
135509517
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135509517
Prokaryotic type
135509517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
135509517
NCBI-ProteinID:
XP_064786318
LinkDB
All DBs
Position
22:complement(41865990..41877233)
Genome browser
AA seq
643 aa
AA seq
DB search
MADAEPMLVPAPGGEKRACPALEEEEEVDHSTKRPRVQKEEKNGGPSHKLPQDEGEEPEG
EETEPLDEDGEGEGLGSGEAFAEMMKHGLTELDVGILKFVSEHQGFSGILKERYSDFVVH
EINKEGKTVRLDDLSVPEEAEEAPVEQPESQVFTEEQNQQLEQLQLFKNKEGNVSIEVAD
DTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQKALAAPRKHSWPKSRGAFC
HFVLYKENRDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKITAERLSHLNK
CLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTEEQVQQAMSSLRETGFINYYGMQ
RFGTTAVPTHQVGKAILQDNWKEVIDLILKPRPGAEKGYLVKCREEWAQSQDPEAALKKL
PVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRIEAFGLK
AVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPTHHVGKGYREMLSADNLDI
DNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYEDPRVSLVHTDVEKLEDQPPPVFNKEG
KYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcagagcccatgctggtccctgcccctgggggggagaagagagcatgccct
gctttggaggaggaggaggaggttgaccacagcaccaagagacccagagtccagaaggag
gagaagaacggagggccctctcacaagctgccccaggatgagggagaagagccagagggg
gaagagactgagccattggacgaggatggagaaggggaagggttggggtcaggagaggcc
tttgcagagatgatgaagcatggcctcacagagctggatgtggggattctgaagtttgtt
agtgaacaccagggcttctcaggcattcttaaggagaggtactcagactttgtggtgcac
gagatcaacaaagaaggcaagactgtgcggttggatgatctctccgttcctgaggaggct
gaggaggccccagtagagcaaccagagtcccaggttttcacagaggagcagaatcagcag
ctggagcagctacaactcttcaagaacaaagagggtaatgtctctatagaggtagctgat
gacacaaaagagaagcggaccctggtccacaaggctgtgaagaccctgtaccctggactg
gagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagctgga
cagaaagccctcgcagcccccaggaaacactcctggcctaagagccgcggggccttctgc
cacttcgtcctctacaaggagaacagagacaccatggaggccatcaacgtgctctccaag
ttcctcaggatgaggcccaatgtcttctcctacatggggaccaaggacaagagagccatc
actgtgcaggagattgcagttctcaagatcacagcagaaagactgtctcacctcaacaag
tgcctcaataactttaaactgggaaacttctgctacaagaaacaccctctgaagctggga
gaactacagggcaatcacttcactgtggtcatcaggaacatcacagggacagaggagcag
gtccagcaggccatgtcctcccttagagagacgggcttcatcaactactacggcatgcag
cgctttggcaccaccgccgtgcccacacaccaagttggcaaggccatcttgcaagacaac
tggaaggaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttatctg
gtgaagtgccgtgaggagtgggcccagtcccaggacccagaagcagctctaaagaagctg
cctgttaaacgctgtgtggagggacagctgctccgaggtctctccatgtacggcaagaag
aacatcatcactgccttcgccatgatccctcgtaacaaccggctgatgtacatccacagc
tatcagagctttatgtggaacaccatggtcagcagacgcattgaggccttcggactgaag
gctgtggagggagacctcgtgctcaggggaggcactgcattcgtgctgtccgcagcagag
gccgagacccactctatccaagacgtggtgatgcccctaccagggtttgacgtcatctac
cccactcaccacgtggggaagggctacagggagatgctgagtgcagataacctggacatt
gacaacatgagacacagggtgagggactactctctggccggggcctaccgacgcatcctc
atcaaacccagtgacgtcagctgggaggtgattaactatgaggaccctcgtgtctccctg
gtccacactgatgtggagaaactagaggaccaacctcccccagtcttcaacaaagagggg
aagtacagggctctgaggatggagttctctctgcctccctccacctatgccaccatggcc
atcagagaggtgctcaagatggacaccagcatcaagaaccagactcagctcaacaccacc
tggctcaactaa
DBGET
integrated database retrieval system
