Oncorhynchus masou masou (cherry salmon): 135509533
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Entry
135509533 CDS
T10723
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135509533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135509533
Transporters [BR:
omm02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
135509533
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
135509533
NCBI-ProteinID:
XP_064786341
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Position
22:42887789..42917421
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AA seq
618 aa
AA seq
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MKGDMESLPKMDPSNDHSRPLDIVPRSDEKMKERGQWGNKVEFVLSVAGEIIGLGNVWRF
PYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQFTSEGGITCWRKITPLFEGVGYAT
QVIVALLNFYYIIVLAWAIFYLSYSFTWDLPWASCNNTWNTDSCMEFQRRNGSFNQPRLN
ATSPVIEFWERRVLRISSGIDHIGSLNWDLVLCLAIAWVLVYFCIWKGVKSTGKVVYFTA
TFPYIMLSILLIRGVTLPGAFIGIKFYLYPDLGRLSDPQVWMDAGTQIFFSYAICLGCLT
ALGSYNKYNNNCYRDCLALCFLNSGTSFVAGFAIFSILGFMSYEQNVPISEVAESGPGLA
FIAYPRAVSMMPFSPLWACFFFIMIVFLGLDSQFVCVESLVTAMVDMYPKTFRRKNRREL
FILAVAIVSFLMGLIMLTEGGMYVFQLFDYYAASGTCLLFVAVFETVCIAWIYGADRFYD
NIEDMIGYRPGPIIKYCWMFFTPATCLGTFAFSLIKYTPLKYNNEYVYPWWGYCLGWLLA
LSSMLCVPLWVVIKMCSVEGTLKERFTILTTASTDLPKTKKEQEKLLAIFPGDGDSLRQR
HPPTKEGYFPVNEKESNC
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgacatggagagcctgcctaagatggacccctccaatgaccacagtcggccc
ctggacattgtgccacggagcgatgagaagatgaaggagaggggccagtggggaaacaag
gtggagtttgtcctttctgttgccggggagatcataggactgggcaatgtgtggcgcttc
ccttacctgtgctacaagaacggaggaggtgctttcttcatcccctacctcatcttcctg
ttcacctgtggaataccagtgttcttcctggagacagccctgggacagttcaccagcgag
ggaggcatcacctgctggaggaagatcactccactgtttgaaggagtgggatacgccaca
caagtcattgtggctctgttgaacttctattacatcattgtcctggcctgggccatcttc
tacctgtcctactccttcacctgggacctgccctgggcctcctgcaacaacacatggaac
acagattcctgcatggagttccagaggaggaatggctctttcaatcagccacgtctgaac
gccacgtctcctgtcattgagttctgggaacggagggttctgcgtatctcctctggcata
gatcatataggatctctcaactgggacctggttctgtgtctggccatagcctgggtacta
gtctacttctgtatctggaagggagtcaagtccactggaaaggtggtatatttcacagct
accttcccctacatcatgctgtctatcctgctcatcagaggggtcaccctgcctggagcc
ttcataggaatcaagttctacctctacccagacctgggccgcctgtcagatccacaggta
tggatggatgcagggactcagatcttcttctcctatgccatctgtctggggtgtctgact
gctctgggaagctacaacaagtacaataacaactgctacagagattgcttggcgctatgc
ttcctgaacagtgggaccagctttgtggcaggctttgccatcttctccatcctgggcttc
atgtcttacgagcagaacgtgcccatctcagaggtggcagaatctggtcctggtctggcc
ttcatagcctacccccgtgcagtgtctatgatgcccttctctcctctctgggcctgtttc
ttcttcatcatgattgtctttttgggtctggacagccagtttgtgtgtgtggagagtctg
gtgacggccatggtggacatgtatcctaaaacctttcggcgtaagaaccgcagagagctc
ttcatcttggcggtggccattgtctccttcctcatgggtctcatcatgctgacagaggga
ggcatgtacgtcttccaactctttgactactatgctgccagtgggacgtgcctgctcttt
gtggctgtctttgagactgtttgcattgcttggatttatggtgctgaccgtttctatgac
aacattgaggacatgattggctaccgtcccggacctattatcaaatactgctggatgttc
ttcactcctgctacctgcttaggtacctttgccttctccctgatcaagtacacccctctg
aagtacaacaatgagtatgtgtacccttggtggggctactgcctgggctggctcctggcc
ctgtcctccatgctctgtgttcccctctgggtggtcatcaaaatgtgttctgtggaaggc
accttgaaagagcgctttacaatcctgaccacggcatccactgacttacctaaaaccaag
aaggagcaggagaagctgctggccatctttcctggcgatggggacagcctccgtcagaga
caccctcccaccaaggaaggctacttccccgtcaacgagaaggagtccaactgctag
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