Oncorhynchus masou masou (cherry salmon): 135509686
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Entry
135509686 CDS
T10723
Symbol
cspg4
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Proteoglycans [BR:
omm00535
]
Cell surface proteoglycans
Others
135509686 (cspg4)
Lectins [BR:
omm04091
]
C-Type lectins
Others
135509686 (cspg4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135509686
NCBI-ProteinID:
XP_064786628
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All DBs
Position
22:complement(51847041..51964050)
Genome browser
AA seq
2334 aa
AA seq
DB search
MRALRLVLLSAFLPLLCLPSPSHGASYFGDSFCKITSIQDVSSFHLSLQFKTSRRSGLLL
LAAGMQDYLFLELQNGKLQVRMNLGAGEMVLSSSLGLQLNNLQEHKVSITMQEAKLTMLI
DDLFSTFISVPETQEDLNIDMGVYMGGTGDLDAPYLSNAIPPFRGCMTNVKLESHQFDIL
DSEPIDCHDTKEPCSSEFEVGDGEATSFISPDSFVSFPTWSGASGSERTLEFLMKTTIED
ALLTFHPGRESDFIAVGVVGGYLKGVVDFGSGIVVLDNPRVQLDDDQWHRIRVTVDASVF
EINVDSQPASLSLRGSEQLDLVGNLYMGGIQGKMKEVFRDSSLSRMEEVITSESFIGCMG
EIKVNQKERSLQDALVTKDVHVKCEGEDYDYSSYYDFEATTTTAPVRIRYVKADPNERHC
YPTDDTPEAFRNITKLIEVNPLLVPEGGEAFLDINNLSPTFNLNTVGIRQSQIIFTLQND
PWYGLVDMNINTRRTKKFTLLDVVNKKIKYLHDGNEKYGDQIQLDVFAHSNSYLPGCLKN
PHQYILPVEIIPVNDTPQLSGGNISITENGRTRLNPNLIKIVDSDTRCEELIVTVTSEPP
RGVGYLENAQQPGRSIKEFTCRQLKDGNIYFVHRTGSGGITLQVSDGQSISHSTTFKLSI
TKPQMSLVTNTGLLLSQGSNSSIGIQNLAVIATPRNGDIVFNVTQALRYGELHVLTRNGL
PKQVTSFHQSDLEQDRLRYVSTVSSDLEDVVSDHFQFDVHLGQFSLWNNTFLIKITPSQV
KMAQVVPLEIEGNVEQKAIKHTDLEAEVKGKSVAPETIRYILLKAPTLGTLQMIGRKLVE
GDSFTQQDLWNAQVSYRVQVQRAVANEDQFQFRVFADNQYSPMYTYPIKIQADSDAPVLT
NERLIVLEGGENILNKDYLWVQTSISTNFVYRVTQDPKYGRLIRESPSGQPRFDGAIRMF
SNEDLNLDRLIYQHDGSESSDDEFSFLVFEQAAGSENIRIDGQVSMSSMFRISIQSKNDH
VPLRVVDKTFNVVRNGQRLLTTEDILFRDNDSGFNDTQLVFVRTGILSGNIVSPSDPSQP
LFRFTQADVKDQNVLFVHHGADRERFQLQVSDGLHKTTALLQIQAGEAYLRVVNNTMVVM
DHGSTKTLNTSLLSAESNMDIRDASDIRYQVTSPPSDGKIIVSGIEASWFTQEDLKKGVV
SYEHNDQSLSSKDSFGFTVEAKGFSEEGTFRIKIFKQGYLSEPVVITNEVIISYEGEHTV
INQDHLKVEQADILPSEMVFTIKEPPRLGHVVMLTNHSDSTAAPSLDYIHSFTQEDVNRG
RILYVSASILGSDAFAADVSNGFTTVDDLRMMVDIVPRLIPIQALNFSVREGGGMALTTE
LLNISHPFYSAVNVDFVVEEPPQHGDIRYLDGDEQELTFFTWEEVKLGHIYYLHDSTESG
EDNFTLSASAYEIERRSLPVTFTVTVFPVNDEAPKLTCNTGLEVLAGEESDITTSMLNTE
DADTPINELVYSIESTINGLVALKVEPDEEIQNFTQAQINNGEVIFIHEGLESGGFSFTV
TDGEHTSPLYRFVVTARQLTITMETGEELKIFPGTRHAITSAILKAVTNEDGDEISFSLV
RPPRLGRLILANDRNQFEEITRFSQSDLESGAVFYEHQMPEEPFWVVRDSVELLLSSPPA
PAVHHVLPITVSYSAASHNISSQLWKNRGLDIVQGQRKVIDSSILDASNLLASLPEAERG
PLDVVFEVRRFPAHGRVTLGGLNLPQGAPYFMQEDVAQGELEYLHDDSGASVDSFSFRAR
LNSQGRGTLPPPQPXAVVLEEVFNISIRRRDSSPPELVSLDVLLEVLQGSMMVITQKYLN
TRDEDSTPDEVRFTVSKAPTNGRLVDATKGDHISTFTQEAVNKGQVGFVSDGSLSDGFIE
FTVSDGKHHTEPHTLHVGILARTLVLAKAPEIQVLQGDDETLVTEEMLRATTGGPNEEEV
LYKITSVPKYAAVMVDRQPTSAFTQTQIREGRVSVRFIKSTSPRDSVAFVARSRAANISS
VLNITVKPLANIPQELLLPRGATVLLDKKLLDATPLANKTRTSPTFSVIQQPQGARFVRA
GGRGPEGDGQPVDTFTQKELDEGRVAMEILNGTGGSQAQDVARFLLKAHGVPPAECVLSF
KTTPYNASAVYPATLLKVPGGSAWSNSNDLPGGAGSPRITPASPRWRGNMDWPHGGDAPT
TAYTDSDSHRKPVVSRRNNLWSILIPILILLLLLLLVAILAFYLVRRNKTGKHNVQTVAG
SKPKNGEISQETFRKTDPANNIPMSQMDSKDADPELLQHCRTTNPELKKNQYWV
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgagagctctgcgtttggtcctgctgagtgccttcttgcccctgctctgtctgcccagc
cccagccatggagcatcctactttggggacagtttctgcaagataacttcgatccaagat
gtctcctcctttcacctgtcgctgcagttcaagaccagccgacgaagtggactcctcctc
ctggctgcagggatgcaggactacctatttctggaactccaaaatgggaaattacaggtg
cgaatgaaccttggggccggtgagatggtgctatcatcatctctggggctgcaactgaac
aacctccaggagcacaaggtgtctatcacgatgcaggaggccaaactgaccatgctgatc
gatgatctcttttccactttcatctctgtgcctgaaacccaggaggacctcaacattgac
atgggggtttacatggggggaaccggagacttagacgccccatatctcagtaatgccata
cctccattccgcggctgcatgaccaatgtcaagttggagtcccatcagtttgatattctc
gactccgagcccattgactgccatgatacaaaggagccctgtagcagtgagtttgaggtt
ggtgatggagaggcgaccagctttatcagcccagactcatttgtgtccttccctacttgg
agcggggctagtggtagtgaaaggaccttggagtttctcatgaagaccaccatcgaggat
gccctactcaccttccaccctggacgagagtcagactttatagctgttggcgttgtgggc
ggttacctaaaaggtgtggtggactttgggagtgggattgtggtactggacaaccccaga
gtacagctagatgatgatcagtggcataggatcagagtcactgtagatgcgagtgtgttt
gagattaacgtggacagccagcctgcctctctctctctaaggggctcagagcaattggat
ctagttggcaatctgtatatgggggggatccagggcaagatgaaggaagtgtttcgtgat
agtagcttgtctcgtatggaggaggtaataacatctgagtcttttatcggatgcatggga
gaaatcaaagtgaaccagaaggagagaagcctgcaggacgcgttggtcaccaaagacgtc
catgtgaaatgcgagggagaggactatgactactcaagttactatgattttgaggcaacc
acaactacggctcctgttcggatccgatatgtcaaagctgaccctaatgaaagacattgc
tacccaactgatgacacaccagaggccttccggaacattacaaaacttattgaagtcaac
cctttgcttgtgcccgagggtggggaagcctttctcgatattaacaaccttagccctaca
tttaacctaaacactgtgggaatccgccaatcccagatcattttcactctacaaaatgac
ccttggtacggactcgtagatatgaacatcaataccagacgtaccaaaaaatttacactc
ctggacgtggtcaacaagaaaatcaagtatctccacgacggcaatgaaaagtatggcgat
cagatccagttggatgtgtttgcccatagtaacagttaccttccaggatgtcttaaaaat
ccccaccagtacattctcccagtggagatcatacctgtcaatgacacaccacaactaagc
ggaggaaacatttccatcacagaaaacggtcgcactcgcttaaatcctaaccttatcaag
attgtggattcggacactcgctgtgaggaattgattgtcaccgtgacctcagaacctccc
agaggggttggctacttagaaaatgcccagcaaccaggaagaagtatcaaagagttcaca
tgcaggcagttgaaagacggcaatatatattttgtccacagaactgggagcggtgggata
actctacaggtatctgacggacaatccataagtcattcgaccacttttaaactgtccatt
accaagccccaaatgagccttgtgaccaatactggccttctgttgtctcagggaagcaac
tcttccattgggatccagaacctggctgtcattgccacccctcgtaatggagatattgtg
tttaatgtcacacaggctctgagatatggtgaattgcatgttctcactcgcaatggtttg
cccaaacaggtgacatcttttcaccagtcagatttggagcaagatcgcttgagatatgtt
agtacagtttcaagtgacctggaggacgttgtgtcagatcattttcaatttgatgtccat
cttggacagttttccctatggaacaatacttttttgatcaagatcacaccctcccaggtt
aaaatggcccaagtagttccccttgagattgaaggcaatgtagagcaaaaggcaataaaa
cacactgatcttgaagcagaagtgaagggaaaaagtgtagccccagaaacgataagatac
atccttctgaaggcccccacactgggtactcttcaaatgattggcaggaagctagttgag
ggagacagtttcacccaacaggacctctggaatgcccaggtcagctatagagtccaggtg
caaagggcggtggctaatgaggaccagttccagttcagagtctttgcagataatcagtac
tcccctatgtatacctacccaatcaagatccaggccgattcagacgcccctgttttgact
aatgagagactcattgtcttggagggcggggagaatattctgaacaaagactatctatgg
gttcagacatccatctcgacaaactttgtttacagggtgacgcaagaccccaagtatggc
cgtctcatcagggagtccccatctggacagcccaggttcgatggggccattagaatgttc
agcaatgaggatctgaatctagataggctgatttaccaacatgatggctcagagtctagc
gatgatgagttctctttcctggtattcgagcaagcagcaggaagtgaaaacatcagaatc
gatggtcaagtgtctatgagcagcatgtttagaatatctattcagtccaagaacgaccac
gtgcctcttagagtggttgataaaaccttcaacgtggtgcgaaacggacaacgtttgctg
accacagaagatatcctcttcagggacaatgactcagggttcaatgatacccagttggtc
tttgttcgcacaggcattctctcaggaaatattgtctccccatcagacccgtcgcagccc
ctctttcgtttcactcaagcagacgtgaaagaccagaatgttctatttgtacaccatgga
gcagaccgtgagcgcttccagctccaggtttctgatggcctgcataagaccacagccctg
ctgcagatccaggctggtgaggcctacctccgtgtggtgaacaacactatggttgttatg
gaccatggaagcacaaagacgctcaacaccagtctgttgagtgcagagtccaacatggac
attagggacgccagtgacattaggtaccaagtgacatcaccccctagtgatgggaagatc
atcgtgagtgggattgaggcctcttggttcacacaggaggatctgaaaaagggtgtggtg
tcctacgagcataacgaccagagtctgagctccaaggactcgtttggcttcactgtggaa
gcgaaaggattttctgaggagggcacattcagaataaagatcttcaagcaaggctatctg
tctgagcctgtggtcatcaccaatgaggtcatcatctcctatgagggagagcacactgtg
atcaaccaagatcatcttaaggtagaacaagcagacatcctgccctctgagatggtgttc
accatcaaggagcctcctcgtctgggccacgtggtcatgctgaccaaccactcggacagt
acggctgcgcccagcctcgactacatccactccttcacccaggaggatgtcaacaggggg
cgcatcctctatgtctctgcctccatcctgggcagtgacgccttcgcggctgacgtcagc
aacgggttcaccaccgtggatgacctccggatgatggtggacattgtgcctcgcctcatc
cccatccaggccctcaacttcagtgtgagggagggcggtgggatggcccttaccactgag
ctcctgaatatttctcacccattctacagtgcggtcaacgtggacttcgtcgtagaggag
ccaccacagcatggggatatccgctacttggatggtgacgaacaggagctcaccttcttt
acctgggaggaggtgaaacttggacacatctactacttacatgacagcacggaaagtggc
gaggacaatttcacactctctgcctcagcctatgagatagagcgccgcagccttcccgtt
accttcactgtcaccgtcttcccggtcaacgatgaggcacctaaactgacatgcaacaca
ggactggaggttttagctggagaggaatcggacatcaccaccagcatgttgaatacagaa
gatgcagacacccccatcaatgagttggtttattccatcgagtcaaccatcaatgggttg
gtggctctaaaggtggaacctgacgaagaaattcagaacttcacacaggcacaaattaac
aatggggaagtcatctttatccatgaaggtctggagtctggaggcttcagttttaccgtg
acagatggagagcacacctcgcctctctaccgctttgtcgttactgctcgacagctcacc
atcaccatggaaaccggggaggagctaaagatctttccaggaacaagacatgccatcacc
agtgccattttgaaggcagtgaccaatgaggatggagatgagataagcttctcattggtc
aggcctcctcgcctgggaagactgatcttagccaacgacaggaaccagtttgaagagatc
acacgcttctctcaatcagatctggagtccggggccgtcttttacgagcaccagatgcct
gaggagcccttctgggtggtccgggactctgtggagctcctgctctcctcccctccagcc
cccgctgtgcatcacgtcctccccatcaccgtgtcctactccgcagccagccacaacatc
tcctcacagctctggaagaacagaggtctggacatagtgcaaggtcagaggaaggtgatt
gacagttccatcctggacgcctccaatctgctggccagcctccccgaggcggagcgaggt
cccttggacgtggtctttgaggtgcgccgcttcccggcccatgggagagtcaccctgggg
ggcctgaatctgccccagggtgccccctacttcatgcaggaggatgtggcgcagggcgag
ctggaatacctccacgatgactctggagcctccgtggacagcttctccttccgagcccgg
ctcaactcccagggccgcggcacccttccccctccccagcccnaggcagtggtcctggag
gaggtcttcaacatctcgatccggagaagggactctagtcctccagagctggtgagcttg
gacgttcttctagaggttctccagggctccatgatggtgatcacccaaaagtacctcaac
acccgtgacgaggacagcacgcccgatgaggtgcgcttcacagtctccaaggcgcccacc
aacgggcggctggtggatgccaccaagggcgaccacatctccacgttcacccaggaggcg
gtcaacaagggccaggtgggctttgtcagtgacggaagcctgtcggacggcttcatagag
ttcactgtgtcggacgggaagcaccacactgagccgcacactctccatgtaggaatcctg
gcccggacgctggtgctggccaaagccccagagatccaggtgctgcagggggacgacgag
accctagtgacagaggagatgttgagggccaccacaggtggccccaatgaggaggaagtc
ctctacaagatcaccagtgtgcccaagtacgctgccgtcatggtggaccggcagcccacg
tcggccttcactcagacccagataagggagggccgggtgagcgttcgcttcatcaagtcc
acctcaccccgggacagcgtggcctttgtggcccggagccgggcggccaatatctcctct
gtcctcaacatcacggtcaagcctctggccaacatcccccaggaactcctgctgccacgg
ggtgccaccgtgctgctggacaaaaagctgctggatgccacgccgctggccaacaagacc
cggacatcacccaccttcagcgtcatccagcaaccgcaaggtgcccgcttcgtgagggct
ggcgggagagggccagagggagacggccagcccgtggacacgttcacccagaaagaactg
gatgagggacgtgtagccatggagatcctgaatggaacaggaggcagccaagcccaggac
gtggctcgcttcctgctcaaggcccacggggtccctccagctgagtgtgttctctccttc
aagacgaccccttacaacgcctcagcggtctacccggccactctccttaaggtccctggc
gggtctgcatggtccaatagcaacgacctccctggaggggcggggtccccacgcatcacc
ccagccagccctcgctggaggggcaacatggactggcctcatggaggagatgcccctacc
actgcctacactgacagtgactcccataggaaaccagtggtgtccaggaggaacaacctg
tggtccatcctcatccccattctgatcctgctgctcctcctcctgctggtggccatcttg
gctttctacttggtgcgtcgcaacaagacgggcaaacacaatgtgcagacggtggctggc
tccaagcccaaaaacggagagatcagccaggagaccttccggaaaaccgacccggccaat
aacatccccatgtcccaaatggactccaaagacgccgacccggaattgctgcagcactgt
cggacaacgaacccggagttaaaaaagaaccagtactgggtatga
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integrated database retrieval system
