Oncorhynchus masou masou (cherry salmon): 135509687
Help
Entry
135509687 CDS
T10723
Symbol
lingo1a
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135509687 (lingo1a)
Membrane trafficking [BR:
omm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
135509687 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
LRR_EndoS
LRR_Zer-1
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
135509687
NCBI-ProteinID:
XP_064786629
LinkDB
All DBs
Position
22:52946666..53067685
Genome browser
AA seq
615 aa
AA seq
DB search
MGAREASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVICHRKKLMSVPE
GIPTETRLLDLSKNRIKTINMDEFATYPNLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSMEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIYVIKDYSFKRLYRLKVLEIA
NWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKIFNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGTTVHFVCQADGDPAPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENGGNGTXNQ
RPVPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGMS
SNNADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagggaagcgagtgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtactgtccggttccaccacaggttgcccgtcccgctgcgag
tgcaatgcccaggagcgctcagtcatatgccaccgcaagaagcttatgtccgtccctgag
ggcatccccacagaaacgcggctgctggacctcagcaagaaccgcatcaagaccatcaac
atggatgagttcgcaacctaccccaacctggaggagctggagctcaacgaaaacaccatc
tccgctattgagcccggcgccttcaacaacctgtacggcctccggacattggggctgcgc
agcaacaagctcaaactcatccagctgggtgtgttcacgggcctcagcaacctcacccag
ttggacatcagtgagaacaagatagtcatcctgctggactatatgttccaagacctgtac
aacctgcgctccatggaggtgggcgacaatgacttggtattcatctcccaccgggccttc
catggtctcagcagcctggagcagctgactttggaaaagtgcaacctgacctcggtgccc
accgaggccttcacccaccttcacagtttgatctttctcaggctgcgccacctcaacatc
tatgttattaaggattactccttcaaaagactgtaccggctgaaagtgctggagatcgcc
aactggccctacctggacaccatgacctccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctccatcccatacgtggctctccggcacttggtc
tacctacggtttctgaatctgtcctataatcccatccacaccattgaggggaataagctc
catgaccttctgaggctccaggagtttcacctggttgggggcaggctggctatgatcgag
ccctactcgttccggggcctaaactatctgaagatcttcaatgtgtctggcaatgccttg
agcaccttggaggagtctgcgttccactcggtaggcaacctggagactctggcgctttac
gataaccccttggcatgtgactgccggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccacctgcgcttcacctgagttcgtacagggaaaagagttt
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcacagcagaaatttgtggacgagggaactactgttcattttgtatgccag
gcggacggtgatcccgccccagtcatcatgtggctctcaccccagaagcagttcatcacg
accaaaaccatcggacgactcacagttttcccagatggcacgcttgaggtgcgctacgca
cagattcaggataatggaacgtatgtgtgtatagccagcaacgccggtggcaatgacaca
tctctcgcccacctgcacgtccacagctactctccagactggcctcaccaacccaacaag
acctttgcattcatctccaaccagcccaatgagaatggtggcaatgggacgncgaaccaa
cgtcccgttcccttcgacatcaagaccttaatcatcgccaccactatgggtttcatatct
ttccttggtgtcgtcctgttttgtctggtgctactctttctatggagtagaggtaaaggg
gccacaaagcacaacatagagattgagtatgtgccacgcaagtcagacgctgggatgagc
agcaacaacgcagacgcccctcgcaagtttaacatgaaaatgatttaa
DBGET
integrated database retrieval system