KEGG   Oncorhynchus masou masou (cherry salmon): 135509687
Entry
135509687         CDS       T10723                                 
Symbol
lingo1a
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:omm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omm04131]
    135509687 (lingo1a)
Membrane trafficking [BR:omm04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    135509687 (lingo1a)
SSDB
Motif
Pfam: LRR_8 LRR_5 LRR_4 I-set Ig_3 ig Ig_2 LRR_9 LRRNT LRR_EndoS LRR_Zer-1 Ig_C17orf99
Other DBs
NCBI-GeneID: 135509687
NCBI-ProteinID: XP_064786629
LinkDB
Position
22:52946666..53067685
AA seq 615 aa
MGAREASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVICHRKKLMSVPE
GIPTETRLLDLSKNRIKTINMDEFATYPNLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSMEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIYVIKDYSFKRLYRLKVLEIA
NWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKIFNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGTTVHFVCQADGDPAPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENGGNGTXNQ
RPVPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGMS
SNNADAPRKFNMKMI
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgggggccagggaagcgagtgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtactgtccggttccaccacaggttgcccgtcccgctgcgag
tgcaatgcccaggagcgctcagtcatatgccaccgcaagaagcttatgtccgtccctgag
ggcatccccacagaaacgcggctgctggacctcagcaagaaccgcatcaagaccatcaac
atggatgagttcgcaacctaccccaacctggaggagctggagctcaacgaaaacaccatc
tccgctattgagcccggcgccttcaacaacctgtacggcctccggacattggggctgcgc
agcaacaagctcaaactcatccagctgggtgtgttcacgggcctcagcaacctcacccag
ttggacatcagtgagaacaagatagtcatcctgctggactatatgttccaagacctgtac
aacctgcgctccatggaggtgggcgacaatgacttggtattcatctcccaccgggccttc
catggtctcagcagcctggagcagctgactttggaaaagtgcaacctgacctcggtgccc
accgaggccttcacccaccttcacagtttgatctttctcaggctgcgccacctcaacatc
tatgttattaaggattactccttcaaaagactgtaccggctgaaagtgctggagatcgcc
aactggccctacctggacaccatgacctccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctccatcccatacgtggctctccggcacttggtc
tacctacggtttctgaatctgtcctataatcccatccacaccattgaggggaataagctc
catgaccttctgaggctccaggagtttcacctggttgggggcaggctggctatgatcgag
ccctactcgttccggggcctaaactatctgaagatcttcaatgtgtctggcaatgccttg
agcaccttggaggagtctgcgttccactcggtaggcaacctggagactctggcgctttac
gataaccccttggcatgtgactgccggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccacctgcgcttcacctgagttcgtacagggaaaagagttt
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcacagcagaaatttgtggacgagggaactactgttcattttgtatgccag
gcggacggtgatcccgccccagtcatcatgtggctctcaccccagaagcagttcatcacg
accaaaaccatcggacgactcacagttttcccagatggcacgcttgaggtgcgctacgca
cagattcaggataatggaacgtatgtgtgtatagccagcaacgccggtggcaatgacaca
tctctcgcccacctgcacgtccacagctactctccagactggcctcaccaacccaacaag
acctttgcattcatctccaaccagcccaatgagaatggtggcaatgggacgncgaaccaa
cgtcccgttcccttcgacatcaagaccttaatcatcgccaccactatgggtttcatatct
ttccttggtgtcgtcctgttttgtctggtgctactctttctatggagtagaggtaaaggg
gccacaaagcacaacatagagattgagtatgtgccacgcaagtcagacgctgggatgagc
agcaacaacgcagacgcccctcgcaagtttaacatgaaaatgatttaa

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