Oncorhynchus masou masou (cherry salmon): 135509689
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Entry
135509689 CDS
T10723
Name
(RefSeq) lissencephaly-1 homolog B-like isoform X1
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00565
Ether lipid metabolism
omm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
135509689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135509689
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135509689
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135509689
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135509689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SPT8
LisH
WD40_RFWD3
LisH_PAC1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
DUF7800
Motif
Other DBs
NCBI-GeneID:
135509689
NCBI-ProteinID:
XP_064786633
LinkDB
All DBs
Position
22:complement(53533994..53565063)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIGDYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagagacaacgagatgaactaaaccgagcgataggagactacctccgc
tcaaacggctatgaagaagcctattccaccttcaagaaagaggcggagttagatatgaat
gaggagttagataagaagtacgctggtcttttggagaagaaatggacctctgtcatcaga
ttacagaagaaggtgatggagctggagtctaagctgaacgaggccaaggaggagatgact
ctagggggtcctgtggcccagaagagggatcctaaggagtggatcccccgtcccccagag
agatacgccctaagcggccaccgctcccccgtcacacgggtcatcttccacccggtcttc
tctgtcatggtcactgcttctgaggacgccaccatcaaggtgtgggactacgaggcaggg
gactttgagcggacactgaagggccatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcctcctgctctgcagacatgaccatcaagctgtgggacttccag
ggcttcgagtgcatccgcaccatgcacggtcatgaccacaacgtgtcttctgtagccatc
atgcccaatggagaccacatagtctccgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtattgtgtgaagacattcacaggccacagagaatgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagactgtgcgtgtg
tgggtggccacctccaaggagtgtaaggctgagctgcgggagcacgaacacgtggtggag
tgtattgcctgggcccccgataccgctcaccccactatcctggaggctactggctcagag
agtaagaagagtgggaagccgggcccattccttctctctggctctagagataagaccatc
aagatgtgggacatcagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggtgtgttggtgcaccctggaggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccctacgtggtgacaggcagcgtt
gatcagacagtcaaagtgtgggagtgtcgctga
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