Oncorhynchus masou masou (cherry salmon): 135509696
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Entry
135509696 CDS
T10723
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135509696 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135509696 (taf6)
03036 Chromosome and associated proteins [BR:
omm03036
]
135509696 (taf6)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135509696 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
135509696 (taf6)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135509696 (taf6)
STAGA complex
135509696 (taf6)
TFTC complex
135509696 (taf6)
SAGA complex
135509696 (taf6)
SLIK complex
135509696 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
135509696
NCBI-ProteinID:
XP_064786638
LinkDB
All DBs
Position
22:complement(53934493..53946878)
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AA seq
582 aa
AA seq
DB search
MHHGKRRKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDI
INTPLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKVVKPGQEEEGS
IQKGQGAISAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSI
ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIP
AVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDE
KTQWTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKAVSEGPVVSNIDKIGADHVQSL
LLKHCASVIAKTRPLPDNMEQYRADYGYLGPTLCSHVVKARAQAALQAQQVNRTTLTITQ
PRPTLTVSQSGIGGSGGSRSPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGAS
STQQVITLSSSSGSSVTSTVASATSTLQPLVKLESRGAGGLGGSRPLQKYIVVSLPTSAS
SSLESKSGMLPPSSSSTSPISLEAGMKMDRSDSPGASTQSPH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacggaaagagacgtaaactgacgacaagcgacatagatcatgctcttaaactg
aagaatgtagagcctctgtatgggttccagtcgcaggagttcatcccgttccgctttgcc
agcggaggagggagggagcttcacttctacgaggagaaggaggtggacctcagtgacatc
atcaacacacccctccctagagtcccacttgacgtttcactcaaagctcactggttaagt
attgaaggtgtccagcctgctataccagaaaacccaccaccagcccccaaagagcagcag
aaggctgagtctacagagcccctgaaggtggtcaagcctggtcaggaggaggagggctcc
atccagaagggccagggagctatatctgcagaggctaaaggtaagaaggagggtctgatg
aggatgaagccccgcagtactcacgagctctcagtggaacagcagctctactacaaggag
atcacggaggcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtatt
gctacagaccctgggctctaccagatgctccccagattcagcacgtttatctctgagggg
gtccgtgtgaacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtc
aaggccctcatggacaaccccacactctacctagagaaatatctgcatgagttgatccca
gcggtggtgacgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccac
tgggctctgagggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcacc
accaccaacaacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgag
aagacccagtggacgacacggtatggctgcatcgctggactgtctgaactaggacctgac
gtgatcaagacgttgatcctgcccaggctcactgtagaaggagctcgtatcaaagctgtg
tctgagggacctgtggtctccaacatcgataagataggagcagaccacgtccaaagcctt
ctactgaaacactgtgccagtgttatcgccaagactcgtcccctgcctgacaacatggag
cagtaccgggcagactatggttacctggggcccacgctctgttcccacgtggttaaggcc
cgggcccaggcagcactacaggcccagcaggtcaacagaaccacacttaccatcacacag
cctcggcccaccctaacggtgtctcagagcgggataggagggtcgggggggtcccgttcc
cccagcatcatcaaggttcccagctccctcaccctcatgtccacccgaccaggcacccca
acacagccatcgccaccggcaaccaagtacatcgtcatggcaaccagtgcaggggcgtcc
tccacccagcaggtgatcaccctgagttcctcctcgggctcctcagtaaccagcacggtt
gccagcgctacctccaccctgcagcctctggtcaagctggagtccagaggagccggcggc
ctcggggggtcgcgacccctccagaagtacattgtggtgtctctccccacgtccgcctct
tcctccctggagagtaagagtggcatgctccccccctcctcttcctccacctctcccatt
tcgctggaggccgggatgaagatggatcgctcagactctcccggggccagcacacagtcc
ccgcactaa
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