Oncorhynchus masou masou (cherry salmon): 135509781
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Entry
135509781 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: reelin
KO
K06249
reelin [EC:3.4.21.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135509781
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135509781
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Reelin_subrepeat-B
EGF_TEN
EGF_Teneurin
EGF_2
EGF_Tenascin
EB
Motif
Other DBs
NCBI-GeneID:
135509781
NCBI-ProteinID:
XP_064786752
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All DBs
Position
22:6446302..6519620
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AA seq
1759 aa
AA seq
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MWDWFHSLQVFICRGTYTTDPPATETQEQQKATAANLTDHNTHSSSPPEAPQRNNPGYRK
PIVSVELPPGARNFGVQFRWWQPYHSGRGRDVWAVDDITMTSVLFNTISLDFISQASPPG
SSIRYVETQSMQIGASYTLQFSLVMGCGRDPSPNIDTQVRLEFSTNHGLTWHLVKEACLP
GMPSCSEFTAPSVYHPSEFTDWRRITLPLPHRAWSSATRFRWIQNYYGEQDEWALDDIYI
GQQCPQMCHGHGWCDHGHCRCDEGFSGPDCLSSSPLSSSVLSDFESQDGLLATWQEVIGG
EVVTPDVGCGVVSSGSSLYFSKAGLRQLVSYDLDTEWAEFVQFYLRVGGDWAECNTADSR
EEGVLLQYSNNGGISWGLIAEMYFSDFIKPRFVHYELPLASKTSCTRFRWWQPLHSGDGY
DQWAIDDVIILSERQKHIIPMANPTLPQNFYEKPAFDYPLNQMSVWLMLGNEGMEKERNG
SFCAATPSAMVFGRSDGDRVAVTRDLALRPGYTLQFKLNIGCESQFSASAPVLLQYSHDA
GRTWALVKEGCYPASSGAGGCEGSGRELREPTVYATGDFERWTRVTVVIRRNVAASKTRF
RWFQESSVYRDAPAFALDGVYISEPCPNHCGGHGDCISGVCFCDMGYTVEQDSCVPAVAS
PTELVEGFESKLSPLWQSLSGGQVGGGCGTISEGKALYFSSSGKRQALTVTLDTTNTRLV
QFYTRIGGKNVGPTCTRPRSRNEGVVVQFSTNNGVQWQFLRELDFGSFLEPQVVTIELPP
AAKTPYTVFRWWQPQQGKHSAQWALDDVLIGMNDSSRTGFHDKFAGTSPLRHNWYRVQGG
EVTVDCLSLDTALSFYSDATDKKPRYAESWDFEVSGSSFLQFDLSMGCSKTVTSSHGVRL
EYSTDCGRHWALLTPECVPPAIGCTGYTMNSVYTATRYTRWRRVTVYLPSAANSPRTRFR
WIQPHFIPGADGWALDNVLLAPGCPWMCSGHGLCDNGRCVCDHGYGGAHCVPLAPLPSIL
REDFNENLAAEQWPEVYGAERGTLSGEPLKSGTALIFKGEGLRMLVSRDLDCTSTLYIQF
SFKFITKGVPERSHSVLLQYSVNGGISWLLLDEFYFPTSTDTLFLHLPLPARAQTNATRF
RLWQPYNSGKKEEVWVIDDLIIDGSSLNNXPVVSDNFEGGPQNYNWLFYPGGNTGLYCPY
QKSGLIVSVELPPGARNFGVQFRWWQPYHSGRGRDVWAVDDITMTSVLFNTISLDFSNVL
DVTQSLGFYLGHVQPYCRHDWTLSFSGEPSPGSSIRYVETQSMQIGASYTLQFSLVMGCG
RDPSPNIDTQVRLEFSTNHGLTWHLVKEACLPGMPSCSEFTAPSVYHPSEFTDWRRITLP
LPHRAWSSATRFRWIQNYYGEQDEWALDDIYIGQQCPQMCHGHGWCDHGHCRCDEGFSGP
DCLSSSPLSSSVLSDFESQDGLLATWQEVIGGEVVTPDVGCGVVSSGSSLYFSKAGLRQL
VSYDLDTEWAEFVQFYLRVGGDWAECNTADSREEGVLLQYSNNGGISWGLIAEMYFSDFI
KPRFVHYELPLASKTSCTRFRWWQPLHSGDGYDQWAIDDVIILSERQKHIIPMANPTLPQ
NFYEKPAFDYPLNQMSVWLMLGNEGMEKERNGSFCAATPSAMVFGRSDGDRVAVTRDLAL
RPGYTLQFKLNIGCESQFSASAPVLLQYSHDAGRTWALVKEGCYPASSGQAAARAVGGNS
GNQPSTPRETLNAGPGSPW
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgtgggattggtttcacagcctgcaggtctttatctgtcggggcacatatactacagat
cctcctgccacagagacacaggagcagcaaaaggccacagcagccaacctcaccgaccac
aacacacacagctcatctccacctgaggccccacagagaaacaaccctggctaccggaaa
ccgatcgtatcagtggagctccctcccggtgcccgtaatttcggggtgcagttccgctgg
tggcagccgtaccactctgggcgtggccgtgacgtgtgggcagtggatgacatcactatg
acctctgtactgttcaacaccatcagtctggacttcatttctcaggcgagcccccccggg
tccagtatccgttatgtggagacacagtccatgcagatcggagcgtcctacaccctgcag
ttttcattggtcatgggctgcggccgagacccctcccccaacatcgacacacaggtccgc
ctggagttctccaccaatcacggcctgacctggcacctagtcaaagaggcctgtctgcca
gggatgcccagctgttctgagttcactgccccaagtgtatatcatccctctgagttcact
gactggagacgtattacattaccgctaccacacagagcatggtccagtgcgactcggttc
cgttggatccagaactactatggcgagcaggatgaatgggctctggacgatatctacatt
ggacagcagtgccctcagatgtgccacggacacggatggtgtgaccacggacactgcagg
tgtgatgaaggtttctcaggtccagactgcctgtcctcctctcctctctcctccagtgtc
ctgtcagactttgagtcccaggacggtctgctggccacgtggcaggaggtgattggtgga
gaggtggtgacccctgatgtgggctgtggggtggtctcctctgggtcctcgctctacttc
agcaaggctggactgaggcagctggtgagctatgacctggacacagagtgggcggagttt
gtccagttttacctccgtgtgggcggagactgggcggagtgtaacacagcagacagcagg
gaggaaggagtccttctacagtacagtaacaatggaggaatcagctggggactcatcgct
gagatgtacttcagcgacttcatcaagccacggtttgtccactatgagctgccgctggcc
tctaagacctcgtgcaccaggttcagatggtggcagcccctccactctggggacggctac
gaccagtgggccatcgatgatgtcatcatactgtctgagagacagaagcacatcatcccc
atggccaaccccacgctgccccagaacttctatgagaagccggcgtttgactaccctctg
aaccagatgagtgtgtggctgatgctgggcaacgagggcatggagaaggagaggaacggc
agcttctgtgccgccacgccctccgccatggtgttcgggcgctctgacggagacagggtg
gcagtgaccagagatctggctctacgtccagggtacaccctgcagtttaagttgaacatc
ggctgtgagtcccagttcagtgcgtcagctccagtcctgctgcagtactcccatgatgcc
ggccgtacctgggcgctggtgaaggagggctgctacccagcatcctcgggggcaggcggc
tgcgagggcagtgggcgggaactcagggaaccaaccgtctacgccacgggagactttgaa
cgctggaccagggtcaccgtggtgatacggcgcaacgtggccgccagtaaaacgaggttc
cggtggttccaggagagtagtgtgtaccgggacgctccagcctttgccctagacggagtc
tacatctctgagccctgtcccaaccactgtggaggacacggagactgcatctctggagta
tgcttctgtgatatgggctatacagtggaacaggacagctgtgtgccagcagtggccagt
cccacagagctggtggagggctttgagagcaagctgagcccgctgtggcagagcctgagt
gggggtcaggttggaggcggctgtggtaccatcagcgagggcaaagccctgtacttcagc
agctctggaaaaagacaggcactgactgtcaccctggataccacaaacacacggctggtg
caattctacacgcgaatcggagggaagaacgttggacccacctgcactagacctcgctcc
cgcaacgaaggagtggttgtccagttctcaaccaacaacggagtgcagtggcagttcctg
agagagctggactttggctccttcctggaaccccaggtggtgaccattgaactgcctcca
gccgccaagaccccctacacagtgttccgctggtggcagccacagcaaggtaaacactca
gcccagtgggcgttggatgacgtcctgatcggtatgaacgacagttccaggactggtttc
catgacaagttcgccgggacgtcccctctgagacacaactggtaccgtgtccagggggga
gaggtcacagtggactgtttgtctctggacacggctctgtccttctactccgatgccaca
gacaagaagccacggtacgcagagagctgggactttgaggtgtctggctcttccttcctg
cagtttgacctgtctatgggttgcagtaagacagtcacgtcctctcatggtgtcaggctg
gagtattccacagactgcgggcgccactgggccctgctcaccccagagtgtgtgccccct
gccattggctgtactggctacactatgaactctgtgtacaccgctacgcggtacacccgt
tggaggagggttacggtgtatctgcccagcgctgccaattctcccagaacacggttcaga
tggatccagcctcacttcatccccggggctgatggctgggccttggacaatgtgctgctg
gcccctggctgtccctggatgtgctctggacacggactctgtgacaacggacgctgtgtg
tgtgaccatggttacggcggggcccactgcgtgcccctggcccccctcccctccatcctg
agagaagacttcaacgagaacctggcggcggagcagtggcccgaggtgtacggggctgag
agggggacgctcagcggggagcccctcaaatctggcaccgcactcatcttcaaaggggaa
ggtctacgtatgttggtgtctagggacctggactgtaccagcacactttacatccagttc
tccttcaagttcatcactaagggcgtcccagaacggtcccactcggtgctgctgcagtac
tcagtgaacggaggaatcagctggttgctgttagatgagttctacttccccacctcgacc
gacacactgttcctacacctccctctgcctgccagggcccagaccaacgctacccgcttc
aggctctggcagccctacaacagtggtaagaaagaggaggtgtgggtgattgatgacctg
atcatcgatggcagctcactcaacaacnctcctgtagtctcagacaacttcgagggcgga
ccccaaaactacaactggctcttctacccaggaggcaacactggactctactgcccttac
cagaagagtggcctgatcgtatcagtggagctccctcccggtgcccgtaatttcggtgtg
cagttccgctggtggcagccgtaccactctgggcgtggccgtgacgtgtgggcagtggat
gacatcactatgacctctgtactgttcaacaccatcagtctggacttcagtaatgtactg
gatgtcactcagagtctaggcttctaccttggacacgtccagccctactgccgacacgac
tggacactcagtttctcaggcgagcccagccccgggtccagtatccgttatgtggagaca
cagtccatgcagatcggagcgtcctacaccctgcagttttcattggtcatgggctgcggc
cgagacccctcccccaacatcgacacacaggtccgcctggagttctccaccaatcacggc
ctgacctggcacctagtcaaagaggcctgtctgccagggatgcccagctgttctgagttc
actgccccaagtgtatatcatccctctgagttcactgactggagacgtattacattaccg
ctaccacacagagcatggtccagtgcgactcggttccgttggatccagaactactatggc
gagcaggatgaatgggctctggacgatatctacattggacagcagtgccctcagatgtgc
cacggacacggatggtgtgaccacggacactgcaggtgtgatgaaggtttctcaggtcca
gactgcctgtcctcctctcctctctcctccagtgtcctgtcagactttgagtcccaggac
ggtctgctggccacgtggcaggaggtgattggtggagaggtggtgacccctgatgtgggc
tgtggggtggtctcctctgggtcctcgctctacttcagcaaggctggactgaggcagctg
gtgagctatgacctggacacagagtgggcggagtttgtccagttttacctccgtgtgggc
ggagactgggcggagtgtaacacagcagacagcagggaggaaggagtccttctacagtac
agtaacaatggaggaatcagctggggactcatcgctgagatgtacttcagcgacttcatc
aagccacggtttgtccactatgagctgccgctggcctctaagacctcgtgcaccaggttc
agatggtggcagcccctccactctggggacggctacgaccagtgggccatcgatgatgtc
atcatactgtctgagagacagaagcacatcatccccatggccaaccccacgctgccccag
aacttctatgagaagccggcgtttgactaccctctgaaccagatgagtgtgtggctgatg
ctgggcaacgagggcatggagaaggagaggaacggcagcttctgtgccgccacgccctcc
gccatggtgttcgggcgctctgacggagacagggtggcagtgaccagagatctggctcta
cgtccagggtacaccctgcagtttaagttgaacatcggctgtgagtcccagttcagtgcg
tcagctccagtcctgctgcagtactcccatgatgccggccgtacctgggcgctggtgaag
gagggctgctacccagcatcctcggggcaggcggctgcgagggcagtgggcgggaactca
gggaaccaaccgtctacgccacgggagactttgaacgctggaccagggtcaccgtggtga
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