Oncorhynchus masou masou (cherry salmon): 135509794
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Entry
135509794 CDS
T10723
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135509794
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135509794
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
135509794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
GldM_1st
Motif
Other DBs
NCBI-GeneID:
135509794
NCBI-ProteinID:
XP_064786766
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Position
22:10854022..10902401
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AA seq
779 aa
AA seq
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MMYCGAQMVNGKDLSKASHDEAVEAIRSTKDPIVVQVLRRNPVGHGGHVGSTQEVHVVDV
CTQTDITFEHIMALAKLRATTPPVPDICPFLLSDSCHSLHTMEQEFYEGTDYLSTLPDQQ
RTEEFEYEEVELCRLNSQEKLGLTLCYRTDEEEDMTIYVSEVGPNSIAARDGRIREGDHI
LQINGQDVQDRKEAVAVLSSEDTRKYVLLVARPEIQLEEAWLDDEHSEFLEQLKMEMLEE
QQREEMELEALQKKTKGEEDDITATCSSRTQDSGLGMSLRNSIDAPDHNALLSHIQRRLS
QCLRDRQDCPTRLDEEEEEEEEEDVAEDGDRFQQLLELKCKIRNSGEYDLIYSRRSTIEC
RLGEPAGGVQRELRMLNDELRSIELECQNIMQAHKLGKGPVGSQGKQGQQVFPQIVCPTP
KDQSPHLGCNDSPRRSKLVDINECPEKPEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSL
QRRMVTITNQRNLRSSMASLHTTASPSPKHRPLHWAPIPGKASSPDHSLYPSESDKVAPA
DNERSGLGNWKVKPQPPPRASQIPYLSPSHDSQHRQPNGNIPAHARHYQSYMQLIQQRSA
AEYAQSQLSLLSGVKEPQLSPAIEPKMEWKVKIRSDGTRYITKRPIRDKILRERALKIKE
ERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMQRSRLESLRESPQSSS
EGRKEVSIIELSHRKMMKKRNKKILDNWMTIQELMTHGAKAPDDPRAKVHKAFLSVTTV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgatgtactgtggtgctcagatggtgaatgggaaggacctctccaaggccagtcatgac
gaggcagtggaggcgatccgctccactaaggaccccattgtggtgcaggtgctcaggagg
aaccctgttgggcacgggggacatgttggctccactcaggaagtgcacgtggtggacgtt
tgtacgcagacagacatcaccttcgaacacatcatggccctggccaagctccgagccacc
acccctcccgtgcctgacatctgccctttcctgctgtccgacagttgtcactctctccac
actatggaacaggagttctatgaggggacagactacctctccaccctcccagaccaacag
aggacagaggagtttgagtacgaggaggtggagctgtgtcgactcaacagccaggagaag
ctgggcctgacgttgtgctacaggacagatgaggaggaggacatgaccatctacgtcagc
gaggttgggccaaacagcatcgctgcaagggatggacgcatcagagaaggagaccacatt
ttacagatcaatggtcaggatgtgcaggacagaaaggaggctgtagcggtgctctctagt
gaagatactaggaaatacgtactgctggttgccaggcccgagatacagctggaggaagcg
tggttggatgatgaacacagtgaattcctggagcaactgaagatggaaatgttggaagag
caacagagagaagagatggagctggaggcacttcagaagaagaccaaaggagaagaggat
gacatcactgccacctgttcctccagaactcaggacagtgggctggggatgtcgttaagg
aacagcatcgacgcccccgaccacaacgccctcctatcccacatccaacggagactctcc
cagtgtctgagggacagacaggactgtcccacgcgtctggacgaagaagaggaggaggag
gaagaggaggatgttgcagaggatggagatcggttccagcagctcctggagctgaagtgt
aagatccgtaacagcggcgagtatgacctgatctatagcagacgcagcactatagagtgt
aggctgggagagccggccggtggcgtgcagcgtgagctccgcatgctcaatgacgagctc
cgtagcatcgagctagagtgccagaacatcatgcaggcacacaagctcggcaaggggccg
gtggggtcccaggggaaacaggggcagcaagtgtttccccaaattgtctgccccacacct
aaggaccaaagcccccacctggggtgcaatgactcacctagaagaagcaagctggtggac
atcaacgagtgtccggagaagccggagaagtcagacaaggacagctcgagtgcctacaac
actgcagagagctctcgcagcacgccgctggcaatggaccgctcccctgagcactccctt
cagaggaggatggtgaccatcaccaaccagaggaacctccgcagcagcatggccagcctc
cacactacagccagccccagccccaaacaccggcctctccactgggcccccatcccaggc
aaggccagcagcccagaccacagcctttacccctccgagtcggacaaggtggcccctgca
gacaacgaaaggagtgggttggggaactggaaggtgaagcctcagcctcctcccagggcc
tcccagatcccttacctatccccgtcccatgactcccagcaccgccagcccaacggcaac
atcccggcccacgctcgccactaccagagctacatgcagctgattcagcagcgctcggct
gcagagtacgctcagagccagctgagcctgctcagtggggtcaaggagccccagctgagc
cccgccatcgagcctaagatggaatggaaggtgaagatccgttcggacggcacgcgctac
atcaccaagagaccaatcagggacaagatcctgcgggaacgcgccctgaagatcaaagag
gagcgtagcggagggatgaccacggatgacgacgctatgtccgagatgaagatggggcgg
tactggagtaaagaggagaggaagcagcatctggtcagggctaaagaacagcggaggaga
cgagagttcatgcagcgcagccgactggagagcctgagggagagtcctcagagcagcagc
gaaggacgcaaggaggtcagcatcatcgaactgagccacaggaagatgatgaagaagcgc
aacaagaagatcctggacaactggatgaccattcaggaactgatgactcacggggccaag
gcccctgatgaccccagggccaaagtacataaggccttcctgtcggtcaccactgtataa
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