Oncorhynchus masou masou (cherry salmon): 135510318
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Entry
135510318 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135510318
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135510318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135510318
NCBI-ProteinID:
XP_064787227
LinkDB
All DBs
Position
23:12318592..12548546
Genome browser
AA seq
1676 aa
AA seq
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MKFWICVLAVSWAVEATHGGTSQGPCSGLDCSGGCNCNPEKGGRGRPGALGPVGPGGPEG
FPGDQGPLGQKGEKGHFGRMGPSGLKGDKGPMGVPGFPGNDGVPGHPGQDGGRGLPGFDG
CNGTQGDPGPRAVDGGIPGASGLPGPKGPKGQKGEAVYVGTRGGAPGLPGLDGVPGPGGP
DGRAGDIGPSGPDGFLGNPGPPGPPGPVGSPSLGFRGEPGAKGNTGPPGPRGVPGDEPLV
GSSITTIYKGDKGEGGYKGVRGPSGRPGPAGPFGYPGEKGENGILGYPGGRGPPGFNGPP
GSPGRPGFTGSPGFPGQPGYSGPKGDQGEQGPPGPPIYADTQGLAVQGAPGDNGIDGFPG
QPGDTGSPGFPGQPGRPGDSFGDGRGGSPGFPGTLGPKGERGNPGRQSYGPEGLPGGPGL
PGPPGPPGPPGRSVSIQPGRFDNLPGAPGRPGGQGPPGASGYKGPKGELGDCNCLGGGTT
GGVGAPGAPGSDGRPGAFGRKGESGDPGIPGFGGQPGTPGRVGERGFFGRKGEKGASFYP
TFSGGIQGEQGAQGLRGPPGNMGRPGRDGLPGSPGQPGPPADVDGYGTIGERGFPGISGA
KGRAGEPGENGIGYQGSVGSRGFPGDSGFAGLPGQPGLPGPPGLTLPCRLPGEDGNPGLP
GIPGRLGPKGESGFPGGPGRPGFDGGKGERGDPGYGGQPGPQGFPGPRGDAGGPGIPGEG
RPGAPGKNGLPGRPGGKGRPGEVLGSSTGLPGTPGFPGGPGDKGEPGASGRPGGSGFDGR
SGIPGAKGERGTDGYPGTLGLPGLPGDRGNGFPGPAGPAGSKGFPGPPGYPGLKGARGDT
GFPGPTGRKGQPGQPGGDGSSGLRGLQGPLGPGGRNGIPGGPGRKGERGYPGLVGFPGMP
GNPGRPGGPGGKGAPGFSGKDGLPGDFGAPGPKGDQGYRGLPGPPALPPRVDYLEKGQRG
DNGANGLPGFPGPRGDKGFPGQPGRQGLPGLPGYADRAKGEPGLPGLPGRPAGPGYPGPV
GSPGIIGFPGMPGPRGDDGRPGFPGNPGVPGQPGAKGERGDSSGYPGSPGAKGESGTPGY
PGGQGANGAPGDNGFPGGPGFSGQKGEPGVPGRPGLLGTPGFTGAKGLNGYPGGRGLDGT
TGRPGSPGSSGEKGLSGSPGLDGLNGLAGPNGLPGTPGYSEEGRPGTPGAAGLKGERGSS
IPGXPGYNAEKGARGESGGPGMTGFPGLPGRRGETVGSNIPGPLGDPGLPGLDGEEGYGG
PPGPPGPPGPSTAQGDRGDAGLPGFPGTPGRRGDPGGPGGPGREGSPGFNGERGDSGYSG
VSGTKGYPGDPGYYGGKGPKGRKGSSGRKGPPGITLPRPRFPTPYGDLGGPGLNGAPGAM
GEPGNPGIPGRGGPKGRPGAVGKLGRNGGPGLDGPLGDPGSPGFPGPSGSQGLPGKPGLQ
GPPGSVARSRSVGFTLVKHSQNNQVPMCPQGMSRLWEGYSLLYVEGQEKAHNQDLGMAGS
CLPRFSTVPFLYCTPNEICYYASRNDKSYWLSTTAPIPMMPVGEEAISQYISRCSVCEAM
SQAVAVHSQDLTIPTCPAGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFI
ECNGAKGTCHFFANKYSFWLTTVEPNREFNPPPMDTLKGGNQLSRVSRCQVCSKIL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctggatttgtgtacttgctgtcagctgggcagttgaagcgacacacgggggg
accagccaggggccctgtagtgggctggactgtagtggaggatgtaactgtaacccagag
aaaggtggcagggggcgtccaggggcattggggccagtaggacccggtggaccagagggg
ttcccaggcgaccaagggcctttagggcaaaaaggagagaagggccacttcggacgcatg
ggcccctctgggctgaaaggagacaaggggcccatgggcgtaccagggttcccaggaaac
gatggagtcccaggtcacccaggtcaggacggtggcaggggtctaccagggtttgatgga
tgtaacggtacccagggagacccaggtcccagagctgtagatggaggaatacctggagct
tcaggactccctgggcctaagggtcctaaagggcagaagggagaagctgtatatgttgga
accagagggggagctcctggtttgcctggactggacggtgtacctggtcctggaggtcct
gatggaagggctggtgacatcggccccagtggtcctgatggattccttggtaatccaggt
ccccccggtccccctggtcctgtagggagccccagcctcggcttccggggggagccagga
gctaagggcaacacggggccacccggacctcgaggcgtgcccggcgacgagccgctagta
ggctcatctattaccactatctacaaaggagataagggggaagggggttacaaaggagtg
cgtggaccatctggtagacccggcccagctggtccttttggctatcctggtgagaaggga
gagaatggaattctgggatatccagggggacggggtcctcctggttttaatggccccccc
ggatctccaggaagaccaggattcacaggcagtccagggttccccgggcaaccaggctac
agtggacctaagggtgaccagggggaacaggggcctcccgggccccccatctacgcagac
acacaagggttggctgttcaaggagcaccaggtgacaatggtatcgacggtttccccggc
caacctggtgacactggctctccagggtttccaggacaaccaggacgaccaggcgactcc
ttcggcgatggtcgagggggcagcccagggttccctggcaccttaggacctaagggagag
aggggtaaccccggcagacagagctacggccctgagggcctaccaggaggaccgggatta
ccaggaccccccggacctcccggaccaccaggcagatctgtcagcatccagcccggcagg
tttgacaatctaccaggagcgccaggacgaccaggaggccagggaccacctggagccagt
ggatacaaaggacccaaaggggaactgggtgactgtaactgcctgggaggaggcaccacg
ggtggggtgggggccccgggggctcctgggtctgatggaagacctggtgccttcggcagg
aagggcgaaagcggagacccaggcatacccggtttcggaggacaaccaggaacacctggc
cgtgtgggcgagaggggtttcttcgggcgtaaaggagaaaagggtgcctccttctacccc
acgttcagcggagggatccagggtgaacaaggggcccagggccttcgagggccccctgga
aacatgggccgacccgggagagacggacttcctgggtcccccggacagcctgggcctcct
gctgatgttgatggctatggaaccattggagagagaggattcccagggatctcaggcgcc
aaaggtcgcgccggtgaacctggagagaacgggattggctaccagggttccgtcggctcc
cgtgggtttccaggcgactcgggctttgcggggttaccagggcaacctggtttacctggc
cctccagggctgacgctaccatgtcgtctacctggtgaggatggaaacccaggcctccct
ggaatacctggaagactaggtcccaagggcgagtcaggtttcccagggggtcccggtcgg
cccggttttgacggagggaagggagagagaggagacccaggttacgggggccagcctggg
ccacaaggtttccctggccccagaggagatgcgggtggcccaggtatcccaggcgagggt
cgtccaggggccccaggaaagaacgggctcccggggcggccaggggggaagggccggccg
ggggaggtgctggggtcctcaacagggctccctggaacacctgggttcccaggaggacca
ggagacaagggagagccaggagcatcaggacgtcccggaggatcaggttttgatggtcgg
tcgggcattcccggagctaagggtgagcgcggtacggatggctacccaggaactctaggt
cttcccggacttcctggagacagaggcaatggatttcccggtcctgctggaccagccgga
agcaaaggatttcctggtcctccaggctaccccggtttaaaaggagccagaggtgacacg
ggcttcccaggcccaactgggaggaagggacaaccaggacaaccaggaggggatggatca
tcaggactcaggggccttcagggaccactgggcccagggggaagaaacggcatccctggg
ggaccaggaaggaagggcgagagaggttaccctggactggtaggattccccggaatgcca
ggtaaccctggaagacctggtggaccaggaggtaaaggagctccggggttctcaggaaaa
gacggcctgcccggtgacttcggagcgccaggacctaaaggtgaccaaggttaccgtggt
ctccccggcccacccgctctgccccctagagtagattacctggagaagggacagaggggc
gacaacggtgccaacggactacctggtttccctggacctagaggtgataagggtttccca
ggccagcctggtcgtcagggtttgcccgggctgcctggttatgctgacagggctaaaggg
gaaccaggactccccggtctccccggacgcccagccgggccaggctacccgggccctgtt
ggatctcctggtatcatcggcttccctggcatgcctggaccaaggggtgacgatggcagg
cctggtttccctggtaaccctggagtccctggtcagccaggtgctaaaggggagagaggt
gactcgtccggctaccccggaagtcccggagctaaaggtgagtccggaacccccggttac
ccaggtggccaaggtgctaatggcgcccccggcgacaacggtttcccagggggccctggg
ttcagtggacagaagggagaaccgggagttcctggaagacccggactcttaggtacccct
ggtttcaccggggctaagggtctgaacggatacccaggaggaagaggtctcgacgggacg
actggccgccccggctcccctggatcatctggagaaaaaggtctgtcgggatctcctggt
cttgatggactcaacggactggctggacctaacggtctaccaggaaccccgggttatagt
gaggaggggcgccccggcacccctggagcggccggtttgaagggagagaggggatcctcc
atccctgganccccggggtacaacgcggagaagggagcgagaggagagtcagggggtcct
ggtatgacgggcttcccaggtctgcctggtcgccgtggggagacagttggctccaatatc
cctggacctctgggagacccaggcctgcccggactcgatggagaagaaggttacggtggt
cctccaggccccccaggcccaccggggcccagtacggcccagggagacaggggtgacgct
gggctacctggcttccccggcacccctgggagacgtggagaccctggaggtcccggtggc
ccgggaagggaaggcagccctgggttcaatggagagagaggcgactctgggtacagtgga
gtgtcaggaaccaaaggctaccctggagatccaggatattacggagggaaaggacccaaa
ggaaggaaaggttcttctggtcgtaaggggcccccaggtataactttaccccgcccgaga
ttcccgacgccgtatggagacttgggaggccctgggctcaacggagctccaggggccatg
ggagaaccaggcaatcccggcattccaggcagagggggtcctaaaggcaggcccggtgcg
gtggggaagctggggaggaacggagggccaggtctggatggacctctgggagaccctggt
tctcctggtttccctggaccttccggatcacaaggtctgcctggtaagcctggtctgcag
ggtccccctggcagtgtggcccgcagcaggagtgttggtttcaccctggtgaaacacagt
cagaacaaccaggtacccatgtgtccccagggcatgtcccggctctgggagggatacagt
ctgctctacgtagaggggcaggagaaggcacacaaccaggatctcggtatggcgggctcc
tgcctcccccgtttcagcactgtccccttcctctactgcacgcccaacgagatctgttac
tacgccagccgcaacgacaagtcctattggctgtccaccactgcgcccatccccatgatg
ccggtgggagaggaggccatcagccagtacatcagcaggtgctccgtgtgcgaggccatg
tcccaggctgtggctgtccactcccaggacctcaccatccccacctgccctgctggctgg
aggtccctctggatcgggtactccttcctcatgcacacagctgccggggcagagggcgga
ggccagtcccttgtttcacccgggtcctgtctggaagacttccgtgcaactcccttcatc
gagtgtaacggggctaagggcacctgccacttctttgccaacaagtacagcttctggctg
accacggtggagcctaaccgcgagttcaacccccctccgatggacacgctgaagggaggc
aaccaactcagcagagtcagtcgctgtcaagtctgcagtaagatcttgtag
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