Oncorhynchus masou masou (cherry salmon): 135510362
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Entry
135510362 CDS
T10723
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04814
Motor proteins
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135510362
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135510362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135510362
03036 Chromosome and associated proteins [BR:
omm03036
]
135510362
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135510362
Membrane trafficking [BR:
omm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
135510362
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
135510362
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
135510362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
ATG16
Motif
Other DBs
NCBI-GeneID:
135510362
NCBI-ProteinID:
XP_064787294
LinkDB
All DBs
Position
23:14272147..14305491
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AA seq
1244 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGATSPDIPESSTAKFLSKQKDIPEIPKSVKQTPVSKKA
PRAVGLSSSRSREDVSEGSLSSKGALGAPVVPLPSGIPATSGAPPPATPSKAEPPASKQE
EESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKHKIQLEQLQEWKTKMQEQQTDLQKQL
KEAKKDAREALEAKDRYMEEMSDTADAIEMATLDKEMAEERSESLQVEVESLKEKVEELT
MDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKDALVRMRDLSSSEKQEHVKLQKQME
KKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDLEEKVRE
LRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQETVADYQQT
INKYRQLTASLQDANKELTSAQNANAEQVQPPPPAELFDFKIKFAETKAYAKAIEMELRK
MEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGN
PMERTGVKMRGPPGEQLSFASGLVYSLTLLQATLHKYQQALNCCSVQVYTQMGTLYSEMS
VHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQTEDCTVQLADHIKFI
QSALDCIGAEVVRLRAFLQPGQEGLALNILLKDLDTTCSDIKQFCKKIRRRMPGTDVPGV
PASLSFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNALKLDDVAFKA
VEQVYGSQGLNPHECLRQSCSAVISTMNKMATAMQEGEYDAERPQGKAPPVEARAAALRA
EITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKKLDTSTKDADERVEK
IQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQSKSTIEGLRAPPA
SGIASIVTGSAGAALAPGAGGLSGPMQVVDSPLLRQQVEAQRLGIKHLKNENNRLKAEKM
RAQLASLPPLHVPKLHLREATSSSSPPAEGPLHGALYRKTEQLLGTLLKMTATVKVVDIT
GKTPVSASAQLLDQTARLQSLSDALDKLKGEVAEHVVSQQPGAKVSSDFATFPISSFVKA
KEEKQGSTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLIA
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggacgggggaggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggccagcgtggcacggtggcgtatgtgggcgccacgctctttgccacgggtaagtgg
gtgggtgtgatcctggacgagcccaagggcaagaatgatggcacggtccaggggaagaga
tacttccagtgtgatgagaactgcggcatctttgtgcgccagtcccagatccagctagtg
gaagatggtgccacctctccagacatcccagaatcttccactgccaagttcctgtccaag
cagaaagacatccctgagattccaaaatcagtcaaacagacgcccgtttccaagaaggct
ccccgggccgtcggcttgtccagctctcggtccagggaggatgtcagcgagggcagcctg
tcttcaaagggtgcgctgggggctcctgtcgtccccctgcccagcggcatccccgccacg
tccggagctccacctcccgccacccctagcaaggctgagcctcctgcatcaaagcaggag
gaagagtctctgcgtggccaggtgaaggacctggaggagaagctggagaccctgaagatg
aagcgggcggaggacaaggtcaagctgaaggagctggagaaacacaagattcagctggag
cagctccaggagtggaagaccaagatgcaggagcagcagacggacctgcagaaacaactc
aaagaggccaagaaggatgcccgggaggcattggaggccaaggaccgctatatggaggag
atgtcagacacggcagacgccatcgagatggccaccctggacaaggagatggccgaggag
cggtccgaaagcctgcaggtggaggtggagtcgctgaaggagaaggtggaggaactcacc
atggacctggagatcattaaacacgaggttgaggagaaaggttctgacggagctgcctct
agttaccacgtaaagcagctggaggagcagaacagcaggctgaaagatgctctggtcagg
atgcgtgacctgtcgtcgtctgagaagcaggagcacgtgaagctgcagaagcagatggag
aagaagaatggagagctggagactctgaggacccagaaggagaaactacaggaggagatg
aagcaggctgaggccaccattgatgagttgaaggagcaggtggatgctgctctcggggca
gaggagatggtagagactctaactgagaggaatctggacctggaggagaaagtcagagag
ctgagagagaccgtcactgacctggaagcgatcaacgagatgaacgacgagcttcaggag
aacagccgagagacagagatggagctgagggagcagttggacctgaacggggccagggtg
agagaggcccagaagagagtggaggctgctcaggagactgtagcagactaccagcagacc
atcaacaagtaccgccagctcactgccagtctgcaggatgccaacaaggaactgaccagt
gctcagaatgccaacgcagagcaggtccagcctcctccaccagctgagctgtttgacttc
aagatcaagttcgctgagaccaaggcctacgccaaggccatagagatggagctgaggaag
atggaggtgggccaggccaacagacaggtgtctctcctcacatccttcatgcccgattcc
ttcctgcgtcacggaggagaccacgactgtatcctggtgctgctgctcataccaagactc
atctgcaaggctgagttgatcagtaagcaggcccaggagaagtttgatctgaacggtaac
cccatggagaggactggggtgaagatgagaggaccacctggagagcagctcagcttcgct
tcaggactggtctactctctcaccctgctgcaggccacgctgcacaaataccaacaagct
ctgaactgctgcagtgtgcaggtgtatacgcaaatggggactctctactcagagatgagt
gtccatgagcgttccctcgacttcttcattgacctgctgcacaaagaccagctggatgag
actgtacacgtggagcctctcaccaaggccatcaagtactaccagcaactgtacagcatc
cacctagctgagcagactgaagactgcaccgtgcagctggctgatcacatcaagttcatc
cagagtgcattggactgtatcggtgctgaggtggtgcgtctcagggctttcctgcagccg
ggacaggaggggctggctctgaacatccttctgaaggacctggacaccacgtgcagtgac
atcaaacagttctgtaagaagatcagacgcaggatgccagggactgatgtaccaggggtg
ccagcctctctgtcttttggagctccggtgtcggagacgctgacggactgcaggcgtcag
ctgacgcgggtggttgccgtgctacaggaggtggctgcggcgggggcacagatggtcgct
cctctcggggagcaggaggggctcaacgctctaaaactggatgatgtggccttcaaggct
gttgaacaggtgtatgggtcccaaggtctaaacccccatgagtgtctgcgtcagtcctgc
agcgctgtcatctccaccatgaacaagatggccactgccatgcaggagggagagtatgat
gctgagagaccacagggaaaggctcccccagtagaggctcgtgcagcagcactcagggca
gagatcactgatgcagagggcctgggagtcaaactggaagacagagacactgtcatcaag
gagctcaagaagtcacttaagatcaagggagaggagttgagtgaagcccacgtccgtctc
agtctcctggagaagaagctggacacgtcgactaaagacgcagacgaacgtgtggagaag
atccagaccaaactggatgagaccctggccctgctcaagaagaaagagaaggagtttgag
gagaccatggacgccctgcaggcagacatcgaccagctggaggcagagaaggcggagctg
aagcagcgtctctccagccaatcaaagagcaccatcgagggccttagggccccgcctgcc
tcgggcattgcctccattgtcacgggatccgccggagccgctcttgccccgggagcaggg
ggtctgtctgggcccatgcaggtggtggactcccctctcctccgccagcaggtggaggct
cagagactgggtatcaaacacctgaagaacgagaacaacagactcaaggcagagaagatg
agagcccagttagcctctctccctcccctccacgtccccaagttacacctgagagaggcc
acctcttcttcctctccccctgctgaggggcctctccacggggctctctacaggaagacg
gagcagctcctagggaccctgctcaagatgaccgccacagttaaagtggtcgacatcacc
gggaagacaccagtgagtgctagtgctcagctcttggaccagacggctcggctgcagagc
ctgagtgacgccctggacaagctgaagggtgaagtggcagagcacgtggtttctcagcag
cctggggcaaaggtctcctctgactttgccacctttcccatttcctctttcgtcaaggcg
aaggaggagaagcagggaagcacggtgtttgtaggccgcgtggccatcccgtgtgccaag
ggccaggagcaggtgcaccgtcttgtcctatcacagcaacacctgcagcaagtgcaccgc
ctcctcatagcctaa
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