Oncorhynchus masou masou (cherry salmon): 135510586
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Entry
135510586 CDS
T10723
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135510586
Membrane trafficking [BR:
omm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
135510586
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
LRRNT
LRR_6
LRR_9
C2-set_2
V-set
Motif
Other DBs
NCBI-GeneID:
135510586
NCBI-ProteinID:
XP_064787691
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All DBs
Position
3:13474439..13586904
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AA seq
622 aa
AA seq
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MTGSPGISGQSLSPWRWLSCWGPVLLLVTMTTLLPGCCQACPPRCECSAQIRSVLCQRRR
LTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEEVDLSENLIATLEPNAFANLQSL
RVLRLRANQLKLVPMGAFAKLVNLTTLDLSENKLVILLDYTFQDLRSLRHLEVGDNDLVY
ISHEAFSGLLGVEDLTIERCNLTSISGQTLSYLRSLVTLRLRQLSIPSLEDHNFRKLANL
RGLEIDNWPYLEFISPLSFQGLDLYWLSITNSNITSVPSSSFRNLIHLTHLNLSYNPITT
LEPWAFRDLLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNDLQTLEEGSFHSVNSL
ETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGNSLSTFTDSALFDHFTC
QKPKIRNRKLQQVTAREGQPVSFLCSAVGEPAPNIMWISPQRRLITAKSNGRITVLPGGT
LEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPMDASSAFFANRSMYGGEFFNDTN
LNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTVETPFR
KAEGPAAVGGAGGARKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggctccccgggcatcagtgggcagtccctgtcaccatggcggtggctgagttgc
tgggggccggtcctgctgctggttaccatgacaaccctactgccaggttgttgccaggca
tgccctccacggtgcgagtgctcggcccaaatccggtccgtcttgtgccagcggcggcgg
ctcaccggcatcccagagggcatccccacggaaactcgcctcctggacctcagccggaac
cgtctccgctgggtggagatgggtgacctggcgccgtatccgcaccttgaagaagtggac
ctgagtgagaacctcattgccacactggagcccaacgcgttcgccaacctgcagagcctc
cgggtgttacggctgagggcgaaccagttgaaacttgtacccatgggggccttcgccaag
ctggtcaacctgaccacgctggacctgagtgagaacaagctggtgattctgttggactac
accttccaggacctaaggagtctaagacacctggaggtgggagacaatgacctggtctac
atctctcatgaggccttctctggcctgctaggggtggaggatctgaccattgaacgctgc
aacctgacttccatctctggccagacgctgtcctacctacgcagcctggtcactttgcga
ctacgccagctcagcatcccctccctggaggaccataacttccgtaagctggccaacctc
cgggggctggagattgacaactggccttacctggaattcatctcccccctgagcttccag
ggtctggacctgtactggctgtccatcaccaacagcaacatcacctccgtcccctcgtcc
tccttcagaaacctgatccacctcacccatctcaacctgtcctacaaccccatcaccacc
ctggagccttgggccttcagggacctactgaggctcaaagagctgatcatggtgaacacg
ggcctggctacggtggagccccactccctgggaggcctcagacagatccgggtcctcaac
ttctcctccaatgacctccagactctggaggagggatcgttccactctgtcaacagcctg
gagacgctgcgggtggatgggaacccactgctgtgtgactgccgtttgttgtggatcctg
cagagacgcaagaccctcaattttgacggcagggtgcctgtgtgcgctgggccggtggaa
gtgcaggggaacagcctcagcaccttcaccgactcagcgctctttgatcacttcacctgc
cagaagcccaagatacgcaaccgcaagcttcaacaggtgacagctcgtgagggccagcca
gtgagtttcctctgcagtgccgtgggagagcccgcccccaacatcatgtggatctcccct
cagcgtcgactaatcacagccaagagcaatggccgcatcaccgtcctcccaggagggacg
ttggagatccgctatgctcaggtcactgacagcggcacctacatgtgcatcgccagcaat
gccgggggcaatgacacttactttgcaatgctcacggttcggggcgcgccgatggatgcc
tcgtcggccttcttcgccaaccgctcgatgtacggcggcgagttcttcaacgacacaaat
ctgaatagcactcgcgtcttcctcaagttcaccctggacctgaccaccatactggtctcc
acggcgatgggctgcatcaccttcctgggcgtggtgcttttctgtttcctgttgttgttt
gcatggagccgggggcggggccagcgtaagaacaacttcaccgttgagacccctttccgg
aaggccgagggaccggcggcggtgggtggcgccggaggtgcccggaaattcaacatgaag
atgatatga
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