Oncorhynchus masou masou (cherry salmon): 135510599
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Entry
135510599 CDS
T10723
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135510599
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135510599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135510599
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135510599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
135510599
NCBI-ProteinID:
XP_064787709
LinkDB
All DBs
Position
23:complement(22510681..22756745)
Genome browser
AA seq
2248 aa
AA seq
DB search
MGLLTQLGLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVWVRSTTQPIYQGECHYPNKA
MPSAGVLPWLQGMMCNIDNPCVNHSTPGEAPGQVNNFNNSIIAGMLIELQSLLANRSIIT
KIQMLSDDVDQWVLILRTSNREKGQPIPLRSILNDNEMFTTYLRENLSMPSTVADGLITS
NIRLNEMMGISRQDDLRITLCSGTALDRYVEFNRAFDKEAFQNVSCSLTAQQLRQTREVF
LQNLDPRKMLTNLPSALDLAPSETFGLVRKTTEDALTVIDEINKLQNSMLFKAADRLDFR
ADAFGSLNILLCGKVSNSKTTMNFPAFGAMRNDTENMARSSNSSAFCKVLIDTLEGTPGL
RIVWRTFRPLIQGKILYTPDTPATRLMVNEANRTLNALAMLKELLEAWENFGWNYFQNGP
QVSALRAFLDNPVFAAALNHRLEGTRWTEELLANFLYNGPPEDRPAGMPPNDWRDVFNAT
SQILDLLKKFIGCLDLDKFEAVDSEGHLVARALELLENDTYWAGIVFEDLDPAASHPPPY
VKYKIRLDIDEGESTNKIKERGWSPGARDSFNNLRYIWGGFAYLQDMMDHGIIRVHTNKS
QPLGVFAQQMPYPCYVDDVFLASIGTMLPMYLVLAFMYTVCMTIKGLVLEKELRLKEVQR
AVGVQNGAIWFAWFTENFVLLMVPCAFISVMVKYGKVLQYSDPSVIFVFLLVFCVATIME
CFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVMGFQVKIAVSLLSCVAFGYGCE
NFAKYEEQGIGIQWSNIAQNPEDGDRYSFIVSIIMMLVDSLIYWLLTWYIENVFPGQYGI
AKPWYFPFTASYWCGTSTAPSADPSQFKDPIEYTGYLEKPPLNMKAGVSIRNLVKIYKTG
KKLAVDGLTVDFFENHITSFLGHNGAGKTTTMSILTGLFAPTSGTALINGYDIRTDMDTI
RKHLGMCPQHNVLFNDLTVEEHIYFYSRLKGRSRDEVKTEIDQMIEDVGLPHKRKEFAKN
LSGGMQRKLSVAIAFVGGSNIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMD
EADILGDRIAIISHGKMCCYGSSLFLKKYFGSGYYLTLVKAGDGQMTNQCTGVEQRQVKE
ETGESMRRTSLVEGIAQQNWSNSEPTDVSKVVCRHVPEAVFLESIGQEITYILPYGGAKD
GTFALLFKELDLKMADIGVTNYGISDTTLEEIFLKVAEDTGVDVEIPDINTALVRDKTRS
SRESKRQRQSLTKVRDTSDEMPGKSVDDEMKVKFTSRVEDVERVANVNGKGSSVITGWEL
IRRQFLALFIKRFHHARRSRKGLIAQVILPAVFVCLSLIFSVIVPPFAEYPNLELQPWMY
GLPQTTFYSNDGPPNNTEVARVADSLVNNPGFGTRCMANNPIPNLPCVPNDSKWFTPTVD
PSISNIFVNGNWSMANPSPNCQCSTPQKTTMLPDCPPGAGGLPPPQRTQNTTDTLQDMTG
RNMTDFLLKTYKEAGRKRYGGISVGGVNSQVRMTEPEIEAVIRDLRSLLNSSQDNTTNQM
LLNTEMLLKELGTRDNVKVWFYNQAWHGIVSFLNVANNAILRGNLPPGHDPREYGISSSS
HPLNLTKAQLSYQAMAATSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGV
NPTVYWVANFAWDICNYIVPCLIVIVIFLCFQQKAYVSLPNLPALILLLMMYGWSITPMM
YPASFIFNVPSTAYVVLTCINLFIGINGSVATFVMELFADDNISKINGIVKQVLLIFPHF
CLGRGLIDMGKNQAMATLYDSFGEDRYQDPLSWDMVGKNLCAMAIQGAVMFTITLLIQYK
FCCKPRLISGESFSKEDEDVDVARERARIHKGGSEKDLLRICDLSKVYSGKKIPAVDRVC
VGVPAAECFGLLGINGAGKTTTFKMLTGDISISGGEAFLNGYSIRTEMRDVHQNMGYCPQ
FDALNDLLTGREHLEFYARLRGVPEKEVPMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKL
STAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTR
MAIMVNGQFKCLGSIQHLKSRFGEGYTVIVRVGGSPPALGPVEEFVHETFPGSVLKEKHH
NTLQYQLPHSEGALASIFSHFTTHQQRLGVEDYSVSQTTLDQVFVNFARYQQEEDNQALQ
AYDNKVDVSDEMPMETRISTDSTIPESV
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacaactcggtctgctcctgtggaagaacttcactcttcggaagaga
caaaaggtgcgtctggtggtggagctgttgtggcctctctttctgttcttcatcctggtc
tgggtgagatcaaccacccaacccatttaccagggcgaatgtcattatccaaataaagcc
atgccttccgccggggtgctgccttggcttcaaggcatgatgtgtaacatagacaaccca
tgtgtaaaccattccacaccgggagaagcaccgggacaagtcaacaacttcaacaattcc
ataattgctgggatgttgatcgagttacagtcacttctggcgaacagatccatcataacc
aagatccagatgctttccgatgatgtggaccagtgggttttgattctacggacatctaac
cgtgaaaaaggtcagcccattcctctgagaagtatcctgaatgacaatgaaatgttcacc
acatatctgagggaaaacttgtccatgccatcgacggtagccgacggtctgattacctca
aatattcgcctgaatgagatgatgggcatttcaaggcaagacgatctgaggatcaccctt
tgcagtggaacagctcttgatagatacgtggaattcaaccgcgcctttgacaaggaggcc
tttcagaacgtcagctgctccctcacagcgcagcagttgagacaaaccagagaagtgttc
ctacaaaacctggatccaaggaaaatgctcaccaatctaccttcagctttggatttggct
ccgtccgagacctttggattagtgagaaaaactacagaggatgccttaaccgtgattgat
gagataaacaagttgcagaactcaatgttgttcaaggccgctgataggctggatttcaga
gcagatgcatttggcagtctgaacatcctactttgcggtaaagtgtcaaactccaagacc
accatgaatttccctgcttttggagcgatgaggaatgacacagaaaacatggccaggagc
agcaattccagtgccttctgcaaagtactgattgacactcttgagggaacccctggccta
cgtattgtttggagaacatttcggcccctaatccaagggaagatcctctacacccctgac
acacctgcaactagactaatggtgaacgaggcaaataggactttaaacgcattggccatg
ttgaaagagttgttggaagcttgggagaattttggttggaactactttcaaaatggcccc
caagtcagtgcactgcgggcctttctggataacccggtgtttgcagccgcactcaaccac
agactcgaaggcacaagatggacggaagaactgctcgccaacttcctgtacaacgggccc
cctgaggaccgccccgcgggcatgccgccgaatgactggcgcgacgtgttcaacgccacc
agccaaatcctggacctcctgaagaagttcattgggtgcctggacctggataagtttgag
gctgttgacagtgagggacatctcgtggctagagccttggagcttctagaaaacgatacg
tactgggctggtatagttttcgaagaccttgaccctgccgccagccacccccctccttac
gtcaagtacaagatccgcttggacatcgatgagggggagagtaccaataagattaaagaa
aggggatggtctcccggggcccgtgactccttcaacaacctgcgctatatatggggaggc
ttcgcctatctgcaggacatgatggaccacggcattatacgggtgcacacgaacaaatca
cagccgctcggcgtgtttgcccagcaaatgccgtatccctgctacgtggacgacgtcttc
ctcgcgagtatcggaaccatgcttcccatgtacctggtgctggccttcatgtacaccgtc
tgcatgaccatcaagggcctcgtcctggagaaggagctcaggctcaaggaggttcagcgg
gccgttggagttcagaacggtgccatttggtttgcgtggttcaccgagaactttgtcctg
ctcatggtcccatgtgcattcataagtgtcatggttaagtatgggaaggtgctgcagtac
agcgacccctcagtgatcttcgtcttcctgctggtcttctgcgtggccaccattatggag
tgtttcttcatcagcgtcttcttctccaaggccaacctggcggcggcgtgcggaggcctc
atctacttcgtcctctacctgccgcacctcctctgctatgcctggagggacgtcatgggg
ttccaggtcaaaatcgctgtgagtttgctgtcgtgcgtggccttcgggtatggctgtgag
aactttgccaagtatgaggagcagggcatcggtattcagtggagtaacatcgcccaaaat
cctgaagacggagaccggtatagcttcatcgtgtccatcatcatgatgctagtcgactcc
ctcatctactggctgctcacgtggtacatcgagaacgtcttcccaggccaatacggaata
gcaaagccatggtacttcccattcaccgcctcctattggtgtgggacttcaacggcgccc
agtgctgaccccagtcagttcaaggaccccattgaatacaccggttatttggaaaagcca
ccactcaatatgaaggcaggggtctcaatcaggaaccttgtcaagatctataaaactggg
aaaaagcttgcagtggatggactaactgtggacttctttgagaatcacatcacctctttc
cttggtcacaatggggcaggaaaaacaaccaccatgtcgatcctgacgggactcttcgct
ccgacgtcggggaccgctctaataaacggttatgatatccgcacagacatggacaccatt
aggaagcatctgggaatgtgccctcagcacaatgtcttattcaatgacctcacagtggag
gaacacatctacttctactccagattaaagggacgaagccgagatgaagtgaaaacggag
attgaccaaatgattgaggatgtcgggctgccacacaaacgcaaggaatttgccaagaac
ctgtcagggggaatgcagaggaaattgtcggtggcaatcgcattcgtgggagggtccaac
atcgtcatcctggatgaacccacagcgggggtggacccatacgcccggagggggatatgg
gaactactgttgaagtacaaacaaggtcgcacaatcatcctctccactcatcacatggat
gaggcggacatcttgggagaccgcattgccattatctctcacggcaagatgtgttgctat
ggctcctccttgttcttgaagaaatactttggcagtggctactacctcactctggtcaag
gccggagacgggcaaatgaccaaccagtgcactggagtcgagcagcgccaggtgaaagag
gagactggtgagtcaatgaggagaaccagtctggttgaagggatcgcacaacagaactgg
agtaactctgaacccacagatgtcagtaaggtggtgtgccggcatgttcccgaggcggtg
ttcctcgagagcatcggccaggagatcacctacatccttccctatggcggggccaaggat
ggcacctttgcactcctcttcaaagagctggacctcaagatggccgacattggtgtcacc
aactatggcatctcagataccacactagaggagattttcctcaaagtggcagaggacaca
ggtgttgatgtggaaataccagatatcaacacagctttggtaagagacaagacaagaagt
tcaagggaatccaagaggcaacggcaaagcctcaccaaagtcagagacacttcagacgaa
atgcctgggaaaagtgttgatgacgagatgaaagtgaagttcactagcagagtggaggat
gtggagagagtggccaatgtgaatgggaagggctccagtgtgatcacgggatgggaactg
atccggagacagttcctggccctcttcatcaaacgctttcaccacgcacgcaggagccgc
aaaggcctcattgctcaggtgattctgcctgctgtcttcgtctgcctgtctctcatcttc
tccgtcatcgtcccaccttttgcggagtaccccaacctggagttgcagccttggatgtat
ggactgccccaaacgacattctacagcaatgatggaccgccaaataacaccgaggttgct
cgggtggcggactctttggtgaataatcctgggtttgggactcgctgcatggccaacaac
ccgataccaaatctcccatgtgtcccgaatgattctaagtggttcactcccacagtggat
ccctctatcagcaacatcttcgtcaacggaaactggagcatggccaacccttcccctaac
tgccagtgcagcactcctcaaaagaccaccatgttgccagattgcccacctggagctggt
gggctgcctccccctcagaggacccagaataccacagacacactgcaggacatgacgggg
cggaacatgacagacttccttttaaagacctacaaggaagcaggcagaaaaaggtatgga
gggatttctgtcggaggggtcaactcccaagtcaggatgactgaaccggaaatagaagct
gtgatcagggatttgaggagcctattaaattcctcccaggataacacaaccaatcagatg
ctcctgaataccgagatgctcctgaaagagctcgggacccgggataatgtcaaggtgtgg
ttctacaaccaggcgtggcatggtattgtatcgttcctcaatgtggccaacaacgccatc
ctgaggggcaacctgccgccgggtcatgaccccagggagtatggaatctcctcctccagc
caccccctcaacctcaccaaggctcagctttcctaccaggcaatggccgccacctccacc
gatgtggtggtgtccatctgtgtcatctttgccatgtccttcatcccagcaagcttcgtc
ctcttcctcatccaggagcgtgtcagcaaggccaagcacttgcagtttgtcagtggcgtc
aacccgaccgtctactgggtcgccaacttcgcctgggatatttgcaactacatagtcccg
tgtctaatagtcatcgtcatcttcctgtgtttccaacaaaaagcctacgtgtcccttcct
aacttaccagctttgattctgctactgatgatgtatgggtggtctatcacacccatgatg
tacccagcctcgtttatcttcaacgttcccagcacggcctacgtggtgctgacctgcatc
aacctcttcatcggcatcaatgggagcgtggccaccttcgtcatggagttgttcgctgat
gataacatctcgaaaatcaatggtattgtgaagcaggtgctgctgatttttccacacttc
tgtctgggtcgagggctcatcgacatgggcaagaaccaggctatggccaccttgtacgat
agctttggggaagaccgttaccaggaccccctcagctgggacatggtagggaagaacctc
tgtgccatggccatccagggggcagtcatgttcaccatcactctccttatccagtataag
ttctgctgcaaacccagactgatttctggagagtcattctccaaggaggatgaagatgtg
gacgtggcacgggaacgtgcacgcatccataaaggtggctcagagaaagacctgttgaga
atctgcgatctttctaaggtgtactcggggaagaagattcctgctgtggacagggtgtgt
gtgggcgttccagccgcagagtgctttggacttctggggattaacggggcaggaaaaacc
accaccttcaagatgctgacgggggacatctccatctccggaggggaggccttcctaaac
ggatacagcatacggacagagatgagggacgttcaccagaacatgggctactgcccgcag
tttgacgccctcaacgaccttctcaccggacgagagcacctggagttctacgccagacta
cgaggcgtaccggagaaagaagtccccatggtggcagagtggggcatccagaagctaggc
ctggtcaaatactccaacaagtcagccggtacctacagtggagggaacaaacgcaagctc
tccaccgccatggctctgattggctgtcctcctgtggtcttcctggatgagccaacaaca
gggatggaccccaaagccagacgcttcctgtgggactgcatcctgagtgtcatcaaagag
ggacgctcagtcatcctaacatcacacagcatggaggagtgtgaggccctatgcacgcgc
atggccatcatggtgaatggacagttcaagtgtctgggcagcatccagcatcttaagagc
aggttcggagaaggctacactgtgatcgtgagggtgggcggctcgccccccgccctgggc
cccgtggaggagtttgtccacgagaccttccctggtagcgtactgaaggagaagcaccac
aacacgctgcagtaccagctcccccacagcgagggcgctctggccagcatcttcagccat
ttcaccactcatcagcagaggctgggtgtggaggactactctgtctcccagaccactctg
gatcaggtctttgtcaactttgcgaggtaccaacaggaggaggacaatcaagccctgcaa
gcttatgacaacaaagtggacgtgtccgacgaaatgccaatggaaactcggatctcaacc
gactcaactataccagagagcgtctga
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integrated database retrieval system
