Oncorhynchus masou masou (cherry salmon): 135510627
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Entry
135510627 CDS
T10723
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04512
ECM-receptor interaction
Brite
Lectins [BR:
omm04091
]
C-Type lectins
Lecticans
135510627 (frem1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135510627
NCBI-ProteinID:
XP_064787763
LinkDB
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Position
23:complement(25879234..25910779)
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AA seq
2201 aa
AA seq
DB search
MGLQRGALRWALSCLLLLVVAGGSHGSLVKTNLGLRVKRGQPAYLQEGDLQFHIPLVKDA
CKVEVVLNEPITQRVGTLTPQVFDCHYLADDVKYVHNGCPILKEDTVKLRLYRFTETETF
TEVFFLRVEIMEPDCNIIKLGPKSLVVPEFYGLSDTLDGNVVSFHYERMISLECSIRVNT
HETHLPGHGQLVIGEPDQLEARGDEPESFIPLRQQLDNKARAMCKTEDCLNGLKLAKVIK
VPCDEFLVMGLRYQHIDPPSPDVDYIALRLDLTDTRSGSIYQSERAWIPVHIPGAVPNQP
PKPAFMSMFILEVDQFILTPLSTATLDAEDGETPKQLLVFNITKPPLEGFITHLSDHTRP
IFSFTWVDLNDMLIGYQPPNSSHTQRRNYEVEFEVHDFFFEKSAPIMVHMSVRTADTNAP
RVSWNMGLSLLEGQSRPITWDQLQIVDNDNFKAVRIITVDGLQHGRLTLRGGKGFMFTVA
DILAGAVRYHHDDSDTTKDFIIFRITDGRHQTRHKFPINILPKDDSPPFLITNTVLELSE
GHTALLRGSILQASDMDSSDDYILFNITRPPQAGELMKIPGPGLTGYPVIRFLQKDLFHS
VVYYRHLGNEVFDDSFEVVLSDFHDPPNLSEPQVIVVHINPVPDQPPKEVPGVTRCLVVK
ETEVVHLTKKQLHFIDLESPDSELTYTVTTPPFYSRSYGGHDAGRLFLVDSIAKFTKDAE
APVLRLFTQHAVNYMKVAYMPPILDIGPYPQHIQLVLSVTNQQGTTVAGICFNITVVPVD
NLAPEVHMKPLTVDEGGECWVGPDHLLLEDHDSTEESLRVELKREPQHGAVQLDGFSMKP
GQNFTVRDLKSLKVRYHHDSSETVGDAIEFIATDGINAINFVLEVKVTLINDEVPVLMPG
LKPVLDCAEGQEVIITAEYIYATDADSDDNSLTYMIARQPYHGVVRKNTIVVDRFIQADI
VAGSITYEHTGAEIGLAPRHDTITFVISDGQAENAPSCCNDREDTLKRGRTQVQESLPLY
DLKVTVFPVDSQMPSIATGDVFVVDEGGVAPITVAHLSASDVDTPLEELVISLVSPPQYG
YIENILPSPGFEKSNTGISIASFSYSDIMNGHVNYVQSRHQRIEPTADQFMLCVSDGKHT
SAHAHFYIIINPINDEVPEFLARNITVREGHMKELDPAVINAVDLDIPKNNLQFTVVQAP
QHGTIMGRTYGNDVPANGRPINRHRDAEVLVQDFTMQELRNGMSLMYMHDDSENMVDSFT
IQLNDGKHQLQRHMMVNVLPVNDEEPRVIRNNGLEVEAGEARLISSAILFAQDSDTTSQE
IVYMLESVPTQGLLQVKVGSDWVTQSAEMNCTQETVDMNLLRYLHTGPLGHTQDLFVFHL
LDGKNRSPAHHFHISLKDMEKGDIAIFVKPVKTSRGERVVLTTDVLLATDGTDKPEELFY
IVTVPPGNGHMEYIKHPGVAISTFSQMDIAANLVGYVHDNRATASLETLQFVVSNGKATR
NGTLEIYVETTDHVLPSLTCNSGLRVPQDSSMAVTPDALALSDPDTPPSDLLFFLAQPPQ
YGTLLRGGVPLAAGGNFTQWDLQELEVTYRHGGGPSQIDRFAFTASDTTNRSFLLEGRVQ
MEPVIFTIQIEPLDSLAPEVVQLQSLWKAEVLSDGRYGIYLSYRELRAQDGNTKDEDLIF
HIHRPPYFGYLENTIKGSFIQQRFTQRDLSKRTIVYIIDPATEALSDSLEFRVSDPLGNT
GPSHTLELKWSRVELAVSEYQACEDQGTVSLDVERKGNMAESSYITIKVREVTATAGKDF
TLSPSSLIQFDPGVSKRSWRIEITQDHLEEAEETFEVTLVSPEGTVVGSTSKALVKIKDS
GKGQCGSSRAPMGSSLGGKQVQSGPYPQHGSIHLETLPLAKADQQMTWTRGDGMPQSVPA
AVPAKPNMKLRAMANRKTIPPSSVHRNGTDTVFTYHGIMSVRLEDDKSPSRKGRKANIQV
TSRGRQQHAAATTPVAPNLNPKPVPKTKSDSLLPHTIPEKPNKEPSPSSGPKPCVPELMG
LLHFNQSSGGLLRCNGVSWKPWAPTDEMVSAQNCRKGWTYHSGNCYFLSNERKSSWSTAI
RACRESHQANLVSVSSKADMDWLWDFSGRKPFWIGLNDRESPGRWEWVGGEPITYTNWRK
SPARGKRKGTRRCVLVWRRAKWQIRDCKTGRGHLYMCYIKT
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgggtttacagagaggggcactgcgatgggcactttcctgcctgctgctgctagtcgtg
gctggagggtcacacggctccctggtgaagactaacctagggttgagggtgaagaggggc
cagccggcctacctgcaggagggggacctgcagttccacatccccctggtgaaggacgcc
tgcaaggtggaggtggtgctcaacgagccaattacgcagagggtggggacgctgacacct
caggtgtttgactgccactacctggctgatgacgtaaagtatgtccacaatggctgcccg
atactaaaagaagatactgtcaagcttcgactctacaggttcacagagacagagaccttt
accgaggtcttcttcctgcgtgtggagatcatggaacctgactgcaacatcatcaaacta
gggcccaagtccctggtggtgccagagttctacggcctgtccgacacgctggatggtaac
gtggtgtccttccactatgagaggatgatcagtcttgagtgtagcatccgtgtgaacacc
cacgagacacacctcccgggtcatggtcagctggtcattggggagccagaccagctggag
gccagaggggacgagccggagagcttcattcctctccggcagcagctagataacaaggcc
agggccatgtgtaagactgaggactgcctgaacggcctgaagctggcaaaggttatcaaa
gtgccctgtgatgagttcctggtgatgggcctgaggtaccagcacatagacccaccgtct
ccagacgtagactacatcgccctgcgactggacctcaccgacaccaggagcgggagcata
taccagtcggagcgggcctggatacctgtccacatccctggcgctgttcccaaccagccg
cccaagccagccttcatgtccatgtttatcctggaagtggaccaattcatcctcacgccc
ctctccactgccaccctggacgcagaggacggagagacccccaaacagctgctggtgttc
aacatcaccaagccccccctagagggcttcatcacccacctttcagaccacacgcgaccc
atcttctccttcacctgggtggacctcaacgacatgcttatcggctaccagccacccaac
tcatcccacacccagcgtaggaactatgaggtggagtttgaggtacatgacttcttcttt
gagaagagcgccccgatcatggtccacatgtcagttagaacagcagacaccaatgcaccc
agggtgtcatggaacatgggtcttagtcttcttgaaggtcagtctcgtccaatcacttgg
gatcagctccagattgtggacaacgacaacttcaaggctgtacgcatcatcactgtcgac
ggcctccagcatggcaggctaacactgagaggtggcaagggtttcatgttcaccgttgcc
gacatcctcgcgggcgctgtgcgctaccatcacgacgacagcgataccaccaaggacttc
atcatcttccgcatcaccgatgggcgccaccagacccggcacaagttccccatcaacatc
ctgcccaaggatgacagcccaccattcctcatcaccaacacagtgctggagctctctgag
ggccacacggccctgctgagaggatccatactgcaggcctcagacatggactcaagcgac
gactacatcctgttcaacatcacccggccaccgcaagctggagagctcatgaagatccct
ggtcctggactcactggttatcctgtcatccgtttcctgcagaaggacctgttccactct
gtggtctactaccgccatctagggaatgaggtgtttgatgactccttcgaagtggtgctc
tcggacttccatgacccacccaacctttcagaacctcaggtcatagtggtgcacatcaac
cctgtgcctgaccagccacctaaagaggtccctggggtgactcgctgcctggtggtgaaa
gagacagaggtggtccacctgaccaagaagcagcttcacttcatcgacctggagtcccct
gacagcgagctcacatacactgttaccactccgcccttctacagcaggtcttatgggggc
catgatgcagggaggctgttcctggttgacagcattgccaaattcaccaaggatgctgaa
gccccagtgttaaggttattcacacagcatgcagtcaactacatgaaagtggcctacatg
cctcccatcctggacattgggccttacccgcagcacatccagttggtgctctccgtcacc
aaccagcagggaaccacagtcgctggcatctgcttcaacattaccgtggtgccagtggac
aacctggccccagaggtgcacatgaaacctctgacagtggacgagggtggggagtgctgg
gtgggtccggaccatctgctgctggaagaccatgactctacagaggagagcctgagagtg
gaactgaagagagagcctcagcacggagctgttcagctggatggcttctccatgaaaccg
ggccagaactttactgttcgcgacctgaaaagcctaaaagttagatatcatcacgacagc
tcggaaacagtgggcgatgccattgaattcatcgctaccgatgggattaacgcaatcaac
tttgttctggaagttaaggtgacactgatcaatgatgaggttccagttctcatgccaggt
ctgaaacctgttctggactgtgcagagggacaggaagtcatcatcaccgctgagtacatt
tatgccacagacgcagacagtgacgataacagtctgacctacatgattgcccgtcagcca
taccatggcgtggtgcgcaaaaacaccattgtggtcgatcgcttcattcaggcagacatt
gtcgcagggagtatcacctacgaacacacaggagcggagattggactagcccctcgacac
gacacaatcacgtttgtgatatccgacggccaggcggagaacgctccgtcatgctgtaat
gaccgagaggacacattgaaaagaggcaggacacaagtccaggagagcctgcctctgtat
gacctgaaggtcaccgtgttccctgtggacagtcagatgccttctattgcaacaggagat
gtgtttgtggtggatgaagggggtgtggcccctataactgtagcccacctcagtgcctcg
gatgtggacactcccctggaggagctggtgatcagcctggtctctcctccccagtatggc
tacattgagaatatcctgcccagtcctggatttgagaaaagcaacacaggcatcagcatc
gcctccttctcttacagtgacatcatgaacggacatgtgaactatgtccagtccagacac
cagaggatcgagccaaccgctgaccagttcatgctctgcgtctctgacgggaaacacacc
tctgcccacgcccacttctacatcatcatcaaccccatcaatgacgaggtcccggagttt
ctcgccagaaatatcacggtgcgagagggccatatgaaggagctggaccctgctgttata
aacgcggtggatctggacatccctaagaacaacctgcagttcaccgtggtccaggccccc
cagcatggcaccatcatgggccgaacgtacggcaacgacgtgcccgccaatggaagaccc
atcaacaggcacagggacgcagaggtgctggtccaggacttcaccatgcaggagttgagg
aatggtatgtctctgatgtacatgcatgatgactctgagaacatggtggacagcttcacc
atccagctgaacgatgggaaacaccagctccagaggcacatgatggtcaatgtactccct
gtcaatgacgaggagcctcgagtcataaggaacaatggactggaggtggaggcaggcgag
gctaggctgatctccagtgctattctctttgctcaggacagcgacactacctctcaggag
atagtctacatgttggagagtgttcccactcagggactgctacaggttaaggtaggctct
gactgggtgacccagtctgcggagatgaactgcacccaggagacagtggacatgaacctg
ctgcgctacctccataccgggccactgggacacacacaggatttatttgtgttccacctg
ctggacgggaagaaccgctcccccgcgcatcacttccacatctccctcaaggacatggag
aaaggagacattgccatttttgtgaagccggtgaagaccagccgtggtgagcgcgtggtt
ctgaccacagacgtcctgttggcgacggacggtacagacaaacccgaggagctgttctac
atcgttacagtcccccccggcaacggccacatggagtacatcaaacaccctggggtggcc
atcagcaccttcagccaaatggacatcgctgccaacctggtgggctacgtccacgacaac
agagccaccgcgtcgttggagacactacagttcgtcgtcagcaatggcaaggccacccgt
aacggcaccctggagatttacgttgagaccaccgaccacgtgctgccatcactgacctgt
aacagcggcttgagagtccctcaggactcctccatggcggtgacccctgacgccctcgcc
ttgtccgaccccgacaccccacccagtgacctgctcttcttcctggcccagcctccgcag
tacggcacactgcttcgtggcggtgtcccgctcgctgccgggggtaacttcacccagtgg
gacctgcaggagctggaggtgacttacaggcacgggggcggcccgtcgcagatcgaccgc
tttgccttcacggcctcagacactaccaacaggagtttcctgctggaggggagggtacag
atggaacctgttatctttaccattcagattgagcctttggacagcttggctcctgaggtt
gtgcagctgcagtctctgtggaaggccgaagtcctgtctgacggtcgctatgggatctac
ctctcgtaccgggagctgagagcgcaggacggcaacaccaaggacgaagacctcatcttc
cacatccacagaccaccatactttggctacctggagaatacgattaaaggcagctttatc
cagcagcgtttcactcagagggacctgagcaaaaggactatcgtgtatatcatagaccca
gctacagaagccctgtcagacagcctggagttcagagtgtccgaccccctggggaacact
gggccctcccacacgctggagctgaagtggtctcgtgtggagctggctgtgtctgagtac
caggcatgtgaggaccagggcactgtctcactggacgtcgaacggaaaggcaacatggcc
gagtcctcgtacatcaccatcaaggtgagagaggtcacagcgactgctggaaaggatttc
actctgagcccgtccagcctaatccagtttgatcctggcgtatccaaaaggagctggcgt
attgaaattacccaagatcacctggaggaggcagaggagacatttgaagtgacactggtg
tcccctgagggaaccgtagtaggcagcacctccaaagcgctggttaaaatcaaggactct
gggaaaggacagtgtggatccagtcgggcccctatgggctccagtctgggggggaagcag
gttcagtcagggccgtacccccaacatggctccattcatttggagacactaccccttgcc
aaggcagaccagcagatgacctggacccggggcgatggtatgccccagtctgtgcccgct
gctgtgcccgccaagcccaatatgaaactcagagccatggccaacagaaagacgattcca
ccatcgtcagtccatcgcaatggaacagacactgtgttcacgtaccacgggatcatgtcc
gtgcgcctggaggatgacaagtcaccgtctaggaagggaaggaaggctaatattcaggtg
accagcagagggcggcagcaacatgcagccgcaacaacaccagtggctcccaacctcaac
cctaaacctgtccctaagactaagagtgacagcttgctcccacatacaatacctgagaag
cccaataaggagccttcacctagctctggccctaaaccctgtgtcccagagctgatgggg
ctcctacactttaaccagagctcaggcgggctcctccgctgcaacggggtctcctggaag
ccctgggctcccactgatgagatggtcagtgctcagaattgtcgtaagggctggacctat
cacagtggcaactgctacttcctcagcaacgagcgtaagtcgtcgtggagcaccgccatc
agagcatgcagggagagtcaccaagccaatctggtgagcgtttcttccaaggctgacatg
gactggctgtgggacttcagtggaaggaagccattctggataggtctaaacgacagggag
agccctggacgctgggagtgggtgggtggagaacccatcacctacaccaactggaggaag
agcccggccagaggcaagaggaaggggaccaggaggtgtgttctggtgtggaggagggcc
aagtggcagatcagagactgtaagacgggcaggggacatctctacatgtgttacatcaag
acgtga
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