Oncorhynchus masou masou (cherry salmon): 135510681
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Entry
135510681 CDS
T10723
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135510681
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135510681
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135510681
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135510681
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
135510681
NCBI-ProteinID:
XP_064787864
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Position
3:complement(14057337..14067632)
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AA seq
461 aa
AA seq
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MYSCSRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYSEVQKHQK
NQEVLNQEVVNQGCLNQGLSLTREDVAGGDSEGDRHRELSHPYSSDGSSSTLSDLDDIPD
LFDLPLTPEEAHEYCSLELLGGHGGSTGNTSNSSSSSSSSNNSSNQNSPQQNLLDVTDAN
GIKHEYQMLSHTQAALLEPLANDCTLMDIERITQSVVKSHLETSQYSSDDLKRLTYSGIQ
YSPEETRNFQCKSEEFMWQQCAHHITNAIQYVVEFAKRITGFMDLCQNDQIILLKAGCLE
VLLIRMCRAFNANTNTMFFDGKFASAQLFKALGCDDLVSAVFDLAKGLCRLQLTDEEMAL
FSAAVLLSPERPWLTDSQKVRKLQEKLFLALQHSLHMSGASDEKLDQMVSKLLLMKSICN
LHVNKLEFFHLVHPETAYSFPPLYREVFGSEISLPDSTNSS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgtgttcccgccagagaaactgtcttattgaccgaaccaaccgcaaccgctgc
caacactgcagactgcagaagtgtctggctttgggcatgagccgggatgcggtgaagttt
ggccgtatgtctaagaagcagcgagacagcctgtactcggaggttcagaagcaccagaag
aaccaagaggttctgaaccaggaggttgtgaaccagggatgtctaaaccagggtttgtcc
ctgaccagggaagatgtggcagggggagacagcgagggggacaggcacagggagctcagt
cacccctacagcagcgacggctccagctccaccctgagtgacctggatgacatccccgac
ctgtttgacctgcccttgaccccggaggaggcccacgagtactgcagcctggagctgctg
ggaggccacggcggaagcaccgggaacacctcaaactcttcatcatcgtcatcatcctct
aacaattcgtccaatcagaactcgccgcagcagaatctgctggatgtcacagacgccaat
ggaatcaaacatgagtaccagatgttgtcgcacacacaagccgctctgctggagccactg
gccaatgactgcactcttatggatatagagcgtatcacccagagtgtggtcaagtcccac
ttggagacgagtcagtacagttctgacgacctgaagaggctgacatacagtgggattcag
tactcacctgaggagacccgcaacttccagtgcaagtctgaagagtttatgtggcagcag
tgtgcccaccacatcaccaatgccatccagtacgtggtggagtttgccaaacgcatcact
ggcttcatggacctgtgtcagaacgaccagataattctgctcaaagcaggctgtctggag
gtgctgttgatcaggatgtgcagggcgtttaacgctaacaccaacaccatgttctttgat
ggcaagtttgcctctgcccagctcttcaaagcccttggttgcgatgacctggtcagtgcc
gtgtttgacttggcgaaaggactctgccgcctgcaactaaccgatgaggaaatggctctg
ttcagcgccgctgtccttctgtccccagaacgaccatggctgaccgacagccagaaggtc
cggaagctgcaggagaagctcttcctggctctgcaacacagtctgcacatgagcggggcc
tccgacgagaaactagaccagatggtgtccaagctgctgctgatgaagtccatctgtaat
ctccacgtcaacaagctggagttcttccatctggttcaccccgagaccgcatacagcttc
ccaccactctatcgggaagtgttcgggagtgagatctctctacccgactctacaaacagc
tcctag
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