Oncorhynchus masou masou (cherry salmon): 135510760
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Entry
135510760 CDS
T10723
Name
(RefSeq) protocadherin-7-like isoform X1
KO
K16498
protocadherin delta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135510760
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135510760
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135510760
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135510760
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135510760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
KIAA1549
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
135510760
NCBI-ProteinID:
XP_064788020
LinkDB
All DBs
Position
23:33899371..34136318
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AA seq
1258 aa
AA seq
DB search
MRTTGAVDYICYSILILQLLNQPDAKQVLRYRLSEEGPADVRVGNVAKDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
SGESSRRLGSTSGGRGVDSRRFDEGAARSSVFELQVADTTDGEKQPQLIIKGALDREQRD
SYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKAVYEADLPENSSPGAPILQLKA
ADADVGVNGQIEYVFGAATESVRRLLRLDEGSGWLSVLHRIDREEVSQLRFTVMARDRGQ
PPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQ
GENGIVTCTVVGDVPFQLKPASEIEGEMNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGS
PSLASNNSLIVKVGDFNDNPPIFSQNVVEVSFLENNAPGERVTTVQAIDADSGKNAEIAY
SLVSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGMPILQGSATVVVLVADK
NDNEPKFMQDVFTFYVKENLTPNSPVGMVTVIDADKGQNAEMSLFIEEEEDIFSIENDTG
TIFSTMSFDREQKTSYTFRVKAVDGGDPPRSATATVSLFVMDENDNPPTVTFPINSTYTL
LPPSSNVRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGSGVISLVGKLEQKHY
GLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTIVEAQVAKSLGTPLNTNIAGDPNYD
LGKQRLSIVIGVVSGIMTVILIILIVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKGK
KPKKDKKNKKSKQPLYSSIVTIEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDL
ARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTI
NKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLEESETPSSKGSSGGPRLGALPLPE
DSYERTTPDGSVGEAEHMENDTRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPK
TTTTQQPKLSTFMTGGGSGSSPPEQQQQHPGSQEALAAMSNGDPSSHVMLGNDRNRNLLN
KKTASSSSSYEGFGSPSFSPPGVEERVVGHPIEEIPLAPTGEYKPSPCGTLTRREVYL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggcgcagtggactatatatgctacagtatactcatcctgcagctgctg
aatcagcctgatgccaagcaagtgttgcgatatcgcttgtctgaggagggacccgccgat
gtcagggtagggaacgtagccaaggacctcggaatcgtcgccgggtctggtgaggttacg
tttaccctcgagtctggctctgattttttcaaaatagataatataacaggcgagctgacc
actaatgaaaggcggatagaccgtgaaaaattacagcagtgccaaatgatatttgatgaa
aacgaatgtttcatagattttgaagtgtcagtaattggaccggctcagagctgggttgac
ctgttcgaggggaaagtcattattttagacataaatgacaacaccccgtctttcccctct
cctgttctgacactgtcagtggaagagaacagaccgattggcactctctatctcctgccc
actgccaccgacagagattttggcaggaacggaattgagagatatgagcttattcaggac
agcggggagagctccaggcgcctgggttcgacctcagggggacgcggagtggacagcagg
agatttgatgagggggcagccaggagcagcgtctttgaactgcaagttgctgacacaact
gatggagaaaaacagccgcagctcatcattaaaggagcgctggacagggagcagagggac
tcttatgagctcaccctgcgtgttagggatgggggcgaccccccacgctcctcccaggcc
atcctgagggtgatgatcactgatgtgaatgacaacagcccccgctttgagaaggctgtg
tatgaggctgacctgccagagaacagctcccctggtgcccccatcctgcagctgaaagca
gctgacgcagacgttggggtgaacggtcagattgagtacgtatttggtgcggccacagag
tcagtgcgtaggctgctgaggctggacgagggctcggggtggcttagcgtgctccatcgt
attgaccgcgaggaggtgagccagctgcgcttcacggtaatggcaagggatcgaggtcag
ccacccaaaatggacaaggcaaccgtggtcctcaacatcaaagatgagaacgacaacgtg
cctgctattgagattcgtaagatcggacgcattttcttgaaagatggagtggccaatgtg
gcagaggatgtagtggtggacacgcctatagctttagtccaggtgtcagaccgcgaccag
ggcgagaacggcatcgtgacctgcactgtggtgggtgacgtgcccttccagctcaaaccg
gccagtgagattgagggtgagatgaataagaagaaatactttctccatacatcagccccg
ctggactatgaggccacacaggagtacaacgtggtcattgtggctgtggactcaggaagc
cctagcctggccagtaataactcgcttatcgtgaaggtgggagacttcaacgacaaccca
cccatctttagccagaatgtggtggaggtgtcctttctggaaaacaatgccccaggcgag
agggtgaccacagtgcaggcaatcgatgctgacagtggcaagaatgcagaaatcgcctac
tccctcgtctcctctgtaaatgggatattctccattgatgcagacagtggtgacatcaga
gtaaacaccattctggacagggagcaaacagagaggtatgagttcaaagtgatagctaaa
gataagggcatgcccatactccaggggtcagccactgtggtggtcctggtggcagataag
aacgacaatgagccaaagttcatgcaggacgtgttcaccttctacgtcaaagagaaccta
acacccaacagccctgttggcatggtgaccgtcattgacgctgacaagggccagaacgct
gaaatgagcctcttcatcgaggaagaggaggatatcttctccattgagaatgacacagga
accattttctccaccatgtcatttgaccgcgagcagaagacttcatacacgtttagggtc
aaggctgtggacggtggagacccacccagatccgctacagccaccgtgtcacttttcgtg
atggacgagaacgacaacccgccaaccgtcaccttccccatcaacagcacttacaccctc
ctgcccccttccagcaacgtcaggactgtagtacgaaccgtcatagccactgatacggac
acagggatcaacgctgacctgaactacagcatcatcggtggaaaccccttcaaactgttt
gagattgacggaggcagcggggtcatctcactggtggggaagctggagcagaaacactat
ggcctccatcgactcgtggttcaggtgaacgacagcgggcagccctcccagagcaccact
acccttgtgcatgtctatgtcaatgagaccctctccaactccaccatcgtagaggcccag
gtggccaagagcctgggtacgccgctcaataccaacattgctggtgaccccaactacgac
ctgggtaagcaacggctgagcatcgtcatcggggtggtctcgggcatcatgacggtcatt
ctcatcatcctcatcgtcgtcatggcccgttactgccgccccaagaacaagaatggctat
gaggcaggcaagaaggaccacgaggacttcttcacccctcagcagcatgacaagggcaaa
aagcctaagaaggacaagaagaataagaagtccaaacagccactgtacagcagcatcgtc
accattgaggcctccaaacccaatggccagcgctacgatggtgtcaacgagaagctgtcg
gacagccctgggatgggccggtaccggtctgttaacggagggcccgggagcccggatctt
gcccggcactacaagtccagctcgccactgcccacggtccagctccacccccagtcaccc
acggccgggaaaaagcatcaggctgttcaggacctgccccctgccaacaccttcgttggc
accggagataacatttcccttggatctgaccactgctctgagtatagcagtcaaaccatc
aacaagtacaacaaacagccgttccgccgagtgaccttctccgtggtgagccagccccaa
gacccccaccagcagggatcgctgcagagctgctacgacagcgggctggaggagtcggag
acgcccagcagcaagggctcttcggggggcccaaggctgggtgcgctgcccctgcccgag
gacagctacgagaggaccacgccggatggcagtgtcggtgaggcagagcatatggaaaat
gacacccggcccttgcccgacgtagccatgacaggcaagtgcacccgggaatgcgatgaa
tacggccactctgactcctgctggatgcctgtgcgcacgtcgcctgagcgccggcccaag
acaaccacaacccaacaaccaaagctttccaccttcatgactggcggtggcagcggcagc
agccctcccgagcagcagcagcagcatcctggcagccaggaagccctggccgccatgtcc
aatggagacccctcctcccacgtgatgctgggcaatgaccgcaaccgcaacctgctcaac
aagaagacagcctcctcctcctcctcctacgagggctttggctcacccagttttagccca
ccgggggttgaagagagggtggtgggtcaccccattgaggagatccctctggctcccacc
ggggagtacaagccctcaccctgcggcacgctcactcgccgggaggtctacctgtga
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