Oncorhynchus masou masou (cherry salmon): 135510794
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Entry
135510794 CDS
T10723
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135510794 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135510794 (ercc6)
03400 DNA repair and recombination proteins [BR:
omm03400
]
135510794 (ercc6)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135510794 (ercc6)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
135510794 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
135510794
NCBI-ProteinID:
XP_064788082
LinkDB
All DBs
Position
23:38664151..38719421
Genome browser
AA seq
1490 aa
AA seq
DB search
MPVEDTENQVPLILSNPASAALTPGGMEEDGANRGTAGCSISITGTSQGDTEQPAMACPD
STGSGEGSSAIKKSGALLHIDRQLIQAVSASSGAAELQGLGVAVYDQDVLEQGVLQQVDQ
AIHEASQAAAKAEAEKEYQSVLDDVRSCMAALKHINKIIEQLTPYATSSKDINRKMESVR
RQKENKEKQLKKIRAKQRRLQAILGGEDTLKIEAELLLEDDVDEEPGPSTLGSMLMPEQE
TEWEELIRTGHMTPFGTRVPQKEDKKEPRKFMLSENSGFDAYLADQAKMAVDRKRPAPLK
QKKKTAVGKEGKKTNEAALPSYSVDKKLQKRMRKLQRTALKAHSKAPAKRVTPIPKPRTK
LQAGGDEMDSEGSEYLPSDELMDPEREEREDRDEGWGEEDEVDYYELKPYRQKSEEKGGK
KGKRRELDEEYYPDSSEEDKGSGKKGKEKMKKDDGDVEFYKQRIRRWRRLRLREREEKRE
RGEEESDQSDAEFDEGFKVPGFLWNKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTI
QVIAFLAGLSYSKLRTRGSNYRYQGLGPTVIVCPATVMHQWVSEFHTWWPPFRVAVLHDT
GSFTQTKEKLISEMAACHGVLITSYSAVRIMQETLQRYDGWHYVILDEGHKIRNPHAGVT
TACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPIFMEQFSVPITMGGYSNA
SPVQVQTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEAQREVYQGY
LDSKEVYQILNGDMQVFSGLIALRKMCNHPDLFSGGPKILKGIPEDQLTEEEHFGFWKRS
GKLMVVESLLRLWFKQQHRVLLFTQSRQMLGILEVFVRENGYTYVKMDGTTTIASRQPLI
ARYNEDKSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKEVT
VYRLLTAGTIEEKIYHRQIFKHFLTNRILKDPKQRRFFKSNDIYELFTLSNPDGTQGTET
SAIFAGTGSDVQAPKKPVRPRSNHRHSVTNHNVSSTGGGAIPSPSPRPGDRTTPLRSNIS
LNKNNRLTDSQEANQGEADIPIGQSQTECDTQHSREEGSNAHILTDPDRDQNSILTHKHR
DSPVTSPNPHKHSHTNSVSPSTQKQRDKYSPHKHRESQGPSPSPYKHREKRKHCDSTVEG
PKNKHGNQKQAKVEGHRISYLVKKRSYKGQEEREEQPEKQDQRQSDDYVLAKLFKKSGIH
SVMQHDSIMEASNPDFVLVEAEANRVAKDALKALKVSRQHCRLPYNQPAPAPARKRFGQK
KNPLLSAPPATVVPAQDKCKDAAIIKKTIARKPIPGGHFSGEGVEVGGSSSTTAPLSSST
LLARMKARNHLSLPQREGDEGEEEDGGARIPSGPPAPPTEHDELLVELRNFVAFQGAVDG
QASTKEVLDHFTPRLTHTQTPVFRELLRNICNFHRAKGQEGTWRLKPDYR
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaagataccgagaaccaggttcctcttatcctctccaacccggctagtgct
gctctcaccccgggaggaatggaggaggatggggccaacagaggaactgctggatgctca
atctccatcactgggaccagccagggggacactgagcagcctgcaatggcctgcccagat
agcactggatctggggagggcagcagtgccattaagaagtctggagccctgctacacatt
gaccgtcagcttatccaggctgtgagtgccagctccggggctgcagagctacagggtctg
ggtgtcgccgtgtacgaccaggatgtgttggagcagggggtcttgcagcaggtggaccag
gccatacacgaagccagccaggctgcagccaaagccgaggcagagaaggagtaccagtct
gtactagacgatgtcaggtcatgtatggcagctctgaagcatattaataagatcatagag
cagctgactccctatgctacttccagtaaagacattaacaggaagatggagtctgtcaga
cggcagaaagagaacaaggagaagcaattgaagaagatcagagcaaagcagaggagacta
caggccatcctggggggagaagacacactgaagatagaggctgagctactgctggaggac
gatgtggacgaagagcccggcccatctactctgggcagtatgctgatgccggaacaggag
acggagtgggaggagctaatccggacgggtcacatgacaccgttcggaacaagggtccct
cagaaggaggataagaaggaaccacgcaagttcatgctgtctgaaaactctggcttcgac
gcttacttggcggaccaagctaagatggcggtggacaggaagagacctgcacccctaaag
cagaagaagaagactgctgtgggcaaggaagggaaaaagaccaatgaagcggctctcccc
tcctactctgtggataagaagctccagaagcgaatgcgtaagctgcagaggaccgctctg
aaggcccactctaaggccccggctaagagggtcacgccgatccccaagcccaggacgaag
cttcaagctgggggagatgagatggacagcgaggggtctgagtacctccccagtgatgaa
ctgatggaccccgagagagaagagagggaggaccgagatgagggctggggagaggaggat
gaggttgactactatgagttaaagccctacaggcagaagagtgaagaaaagggggggaag
aaggggaaaaggagagagcttgacgaggagtattaccccgacagctcagaggaagacaag
ggttcagggaaaaagggaaaagagaagatgaagaaagacgatggagatgtggagttctac
aaacagaggatacggcggtggaggcggctgcggctgagagagagggaggagaagagagag
agaggagaggaggagagtgaccagagtgatgctgagtttgatgaaggattcaaagtgcct
ggattcctctggaataaactcttcaagtaccagcagacaggtgtgaggtggctgtgggag
ctacactgccagcaggcagggggaatcctgggggatgagatgggtctgggtaaaaccatc
caagtcatcgcattcctggctggcctcagctacagcaaactacgcacacgagggtccaac
tacaggtaccaaggactaggtcctacagtgatagtgtgtccagctacagtcatgcaccag
tgggtcagtgagtttcacacctggtggcccccattcagagtggctgtcctacatgacacg
ggatccttcacccaaacaaaggagaagttgatatcagagatggcagcatgtcatggtgtc
ttgataacgtcgtattcagccgtgaggatcatgcaggagaccctgcagagatacgacggc
tggcactacgttatactggacgagggacacaagatccgcaaccctcacgctggagttacc
accgcctgcaaacagtttcgtactcctcataggttcattctatctggcagtcctatgcag
aacaatctgaaggagctgtggagtctatttgactttgtcttccctggcaaactgggcacg
ctgcctatttttatggaacagttctctgtaccgatcaccatggggggctacagcaacgct
tcacctgtacaggtccagacagcgtataagtgtgcgtgtgttctgagggataccattaac
ccttacctactcagacggatgaaggctgacgtgaaggccaacctctctttacctgacaag
aatgaacaggttttgttttgcaggctaacagaggcgcagcgtgaggtgtatcagggctat
ctggactccaaagaggtctaccaaatactgaatggagatatgcaggtgttctcgggcctg
atagcactgcgtaagatgtgtaaccacccggacctgttctctgggggtcccaagatcctg
aagggtataccagaggaccaactgactgaagaggaacactttggcttctggaaacgttcc
ggcaaactgatggtggtggaatcactgctccgactttggtttaaacagcaacacagagtc
ctgctgttcacacagtccagacagatgttggggatattggaggtttttgtgagggagaat
ggctacacctatgtgaaaatggatggtaccacgaccatcgcctctagacagcctctcatc
gctcgatacaacgaagacaagtctatctttgtgttcttgttgaccaccagagtggggggg
ctgggagtcaacctgaccggagccaaccgagtcatcatctatgaccccgactggaaccct
agcactgacacacaggctcgagagcgagcttggaggatcggtcagaaaaaggaggtgact
gtctatagactactgaccgccgggaccattgaggagaagatctaccacaggcaaatcttc
aaacacttcctgaccaaccgcattctgaaggaccccaaacagcgacgcttcttcaagtcc
aacgacatctacgagctgtttaccttatctaaccctgacgggacgcagggcactgagacc
agcgctatatttgcaggcacgggttctgatgtccaagctcctaagaagccagtcagacca
aggtctaaccatagacactctgtaaccaatcacaatgttagctccactggaggtggagcc
atcccttccccatctccccggcctggagacaggaccaccccccttcgcagtaacatctct
ctcaataagaacaacaggctgacggacagccaggaagccaaccagggcgaggcagatatt
cctattggacagtcccagacagaatgtgacacacagcattctagggaagagggaagcaat
gctcatatactcacagaccccgacagagaccaaaactccattctgacccacaaacacaga
gactcacccgtgaccagcccaaacccacacaaacattcacacactaactccgtcagtccc
agcacacagaaacaacgagacaaatacagtccacacaaacacagagagtctcaaggaccc
agccccagtccctacaaacaccgggagaagaggaagcactgtgactcaacagtagaagga
cctaaaaacaaacacgggaatcagaaacaggccaaggtcgagggtcatcgcatctcctac
ctggtgaagaagaggagctacaaaggacaagaggagcgcgaggagcagccggaaaaacag
gaccagagacagagcgacgactatgtactggccaaactcttcaagaagtcgggtatccac
agtgtgatgcagcatgactccatcatggaggcgtctaacccagactttgtcctggtggaa
gctgaagctaacagagtagcaaaagacgctttgaaagctctgaaggtctccagacaacac
tgtagactgccctacaaccaacctgccccagctccagccaggaagaggtttggtcagaag
aagaatcctttgctgtctgctcctcctgctacagttgtcccagctcaggacaaatgcaag
gacgctgccatcatcaagaaaaccatcgctaggaaaccaatcccggggggtcacttcagt
ggagaaggggtagaggtgggaggctcttcctctactacggcccccctctcttcctccact
ctactggcccgcatgaaagctaggaaccacctcagcctgccccagagagaaggggatgaa
ggagaagaggaagatgggggtgcccgtatcccctcaggccctcctgccccccctacggaa
cacgatgaactcctggtggagctgagaaactttgtggcattccagggagctgtggatgga
caggccagcaccaaggaggtcctggaccacttcacccccagactgacccacacccagacc
cctgtcttcagagaactactccgaaacatctgtaacttccacagggcaaaggggcaggag
gggacgtggagacttaaacctgactacagataa
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integrated database retrieval system
