Oncorhynchus masou masou (cherry salmon): 135510810
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Entry
135510810 CDS
T10723
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00250
Alanine, aspartate and glutamate metabolism
omm00410
beta-Alanine metabolism
omm00430
Taurine and hypotaurine metabolism
omm00650
Butanoate metabolism
omm01100
Metabolic pathways
Module
omm_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
135510810 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
135510810 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
135510810 (gad1b)
00430 Taurine and hypotaurine metabolism
135510810 (gad1b)
Enzymes [BR:
omm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
135510810 (gad1b)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
135510810
NCBI-ProteinID:
XP_064788134
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Position
3:14731267..14767883
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AA seq
588 aa
AA seq
DB search
MATSEPTATGGDQDPNSANLRPSSTNYDAWMQGCTRKLGLKICGFLQKNNSLGEEGRLAG
SLSERQKNLYSCDNSDRDARFLRTETDFSNMFARDLLPAKNGEEATMQFLLELVGILTNY
VRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRF
FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREMIGWPSGEGDGI
FSPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAALGFGSEN
VVLLSTDERGRVIPADLEAKILDVKQKGYHPLFVNATAGSTVYGAFDPINEIADICEKYD
MWLHVDGAWGGGLLMSRKHRHKFSGVERANSVTWNPHKMMGVPLQCSAILVREKGILSGC
NSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLS
QYLYDKIRNRQGYEMVFQGVPQHTNVCFWYIPPSLRGLEHNSEEYREKLHKVAPKIKAMM
MESGTTMVGYQPQGQKVNFFRMVVSNPAALQSDIDFLIDEIERLGHDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgacagccactggcggggaccaggaccccaactctgccaattta
cgaccttcgtctacaaactatgacgcgtggatgcaaggctgcacgcggaaactgggtttg
aagatctgtgggttcctgcagaagaacaacagtctcggggaggaaggccggctcgcaggc
tcactctcagaacgccagaagaacctgtattcctgtgacaacagcgaccgggatgcccgt
ttcctccgcactgagaccgatttttccaacatgtttgcgagagacttacttcccgccaaa
aacggagaagaggcgactatgcagttcttgttggaacttgtgggcatcctcaccaactac
gtcaggaagacgtttgaccgttccaccaaggttctggacttccaccaccctcaccagctg
ctcgagggcatggagggattcaacctcgagctctctgaccagccagagtccctcgagcag
atcctcgtggactgcagggacacgctcaagtacggcgtgcgaacaggtcatccacggttc
ttcaaccagctgtctacagggctggacatcattgggctggctggggagtggctcacctcc
acagccaacaccaacatgttcacctatgagatcgctccagtgtttgtcctgatggagcag
ctgacgttgaagaagatgagagagatgattggctggccctcgggagagggggacggcata
ttctcaccagggggcgccatctctaacatgtacagtgtgatgattgctcgctacaagtac
ttcccagaggtcaagaccaagggcatgtctgccgctccccgcctggtgctcttcacatca
gaacatagccactactctatcaagaaggccggggcagctctgggctttggttctgagaac
gtggtcctgctgagcacagatgagagggggagagttattcctgctgatctagaagctaag
atcctcgatgtcaagcagaagggttaccatcctctgtttgtgaatgctacagctggttct
acagtctacggagcatttgaccccatcaatgagatcgctgacatctgtgaaaaatacgac
atgtggctgcacgtagacggtgcatggggaggtggtcttctgatgtccaggaagcatcgc
cataagttcagcggagtagagagggctaactctgtcacatggaatcctcacaagatgatg
ggagtgcctctacagtgctccgccatcctagtcagagaaaagggtattctgtcaggctgt
aactcgatgtgtgctgggtacctgttccagcccgataaacagtatgatgtcagctatgac
acgggagacaaggccatccagtgtggccgacacgttgacatcttcaagttctggctcatg
tggaaggccaagggcactatagggtttgagcagcacattgacaagtgtctggacctgtct
cagtacctctacgacaagatcagaaacagacagggatacgagatggtgttccagggagtg
ccccagcacaccaacgtgtgtttctggtacatcccacccagtctgagaggcttggaacac
aacagtgaggagtatcgagaaaaacttcacaaggtggcgcccaagatcaaggcaatgatg
atggagtcagggacgaccatggtgggctaccagcctcagggccagaaggtcaatttcttc
cgcatggtcgtctccaaccccgcagccctccagtcagacatcgacttcctcattgacgaa
atcgagaggctggggcatgacctgtaa
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